Oreochromis aureus (blue tilapia): 116335080
Help
Entry
116335080 CDS
T07295
Symbol
snd1
Name
(RefSeq) staphylococcal nuclease domain-containing protein 1 isoform X1
KO
K15979
staphylococcal nuclease domain-containing protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNase
TUDOR
Agenet
Motif
Other DBs
NCBI-GeneID:
116335080
NCBI-ProteinID:
XP_031614557
Ensembl:
ENSOABG00000008506
LinkDB
All DBs
Position
LG17:12955257..13126987
Genome browser
AA seq
910 aa
AA seq
DB search
MASVSGPAQTASASAPPLQRGIVKMVLSGCAIIVRGQPRGGPPPERQINLSNIRAGALAR
RAAQGQPESKDTPDEPWAFQAREFLRKKLIGKEVCFTVEYKNMHREYGMVYLGKDTTGEN
IAESLVSEGLATVRREGFRGNNPEQARLCDLEDQSKASKKGLWSEGGGAQTIRNIKYTIE
NPRNFVDSLHQKPINAIIEHVRDGSVVRALLLPDYYLVTVMLSGVKCPTFKREADGTETP
EPFAAEARFFTESRLLQRDVQIILESCPNQIILGTILHPNGNITELLLKEGFARCVDWSM
AVYTQGAEKLRAAERSAKERKVRIWKDYVAPTANLDQKDRQFVAKVMQVVNADAMVVKLN
SGEYKTIHLSSIRPPRNEGEEKNKDKDKRFRPLYDIPYMFEAREFLRKKLIGKKVNVTVD
YIRAATGPGEGTPAFPERTCATVTIGGINIAEALVSKGLATVIRYRQDDDQRSSHYDELL
AAEARAIKNGKGLHSKKEVPIHRVADISGETQKAKQFLPFLQRAGRSEAVVEYVFSGSRL
KLYMPKETCLITFLLAGIECPRSSRNTPGGMQVAEPFSDEAMLFTKELVLQREVEVEVES
MDKAGNFIGWLHIEGVNLSVALVENALSKVHFTAERSAYYKTLVAAEEGCRQRKEKIWAN
YEEKPVEEVVHLSEEKERVANYKPVYVTEITDTLHFYAQDVETGSQLESLMETMRAEIAA
QPPVEGSYSPRRGDYCIAKFADGEWYRARVEKVESPAKVHVFYIDYGNREVVSSTRLAPI
PPAFSTRTLPVQATEYTFAFIQVPQDEDARADVVDCVVRDIQNTQCLLNVEYSGATCPHV
TIQFGDTKEDVGLGLVKEGLVMVDVRKEKHLQKMVTEYLNSQESAKSARLNIWRYGDFRA
DDADEFGYSR
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atggcatctgtttcgggaccagctcagacagcctctgcttcggctcctcctctgcaaaga
ggaatcgtgaagatggttttgtcaggctgtgccatcatagttcggggtcagcctcgaggt
ggcccacccccagagcgtcagatcaatctcagcaatatccgagctggggccttggcccgc
cgagccgcacagggccagcccgagagtaaggacacccctgacgagccatgggccttccaa
gccagagagttcctgcggaagaagctaatcggcaaagaagtgtgctttacagtggaatac
aagaatatgcacagggaatacggcatggtctacctggggaaagacacaacaggcgaaaac
attgctgagtccttagtgtcggaaggccttgccacagtccgcagggaaggattcagaggg
aacaatccagagcaggccagactgtgtgacttggaggaccagtcaaaggcctctaagaag
ggtttgtggagcgagggtggcggcgcgcagactatccgcaacatcaagtacaccatagag
aatccccgcaactttgtcgactctttgcaccagaaacctatcaatgccatcatcgagcat
gtgcgggacggaagtgttgttcgtgccttgctgctcccagactactatctggtcactgtt
atgctgtctggtgttaagtgtcccacattcaagagggaagcagatggtacagaaacgcca
gagccatttgcagcagaggccagattcttcacagaatcccgtcttcttcagcgagacgtt
caaataatcctggagagctgccccaaccagatcatactgggcaccatccttcacccgaat
ggtaacatcacagaactcctgctgaaagaagggtttgcacgctgtgtggactggtccatg
gctgtttacacccagggagctgaaaaactgagagctgctgaacgatctgctaaagagcgc
aaggttcggatctggaaagactatgtggcgccgacagccaacttggatcagaaggacagg
caatttgtagctaaggtgatgcaggtggtcaacgctgacgccatggtggtcaagctcaac
tctggcgaatacaagaccatccacctgtccagcattcggcccccaaggaatgagggagag
gagaagaacaaggacaaagacaaacgcttccgtcccctctatgacattccctacatgttt
gaggcccgggagttcctgaggaagaagctcattggtaaaaaggtcaacgtgacagtggac
tacatcagagcagctactggtccaggagaaggcacgcctgccttcccagagcgtacctgt
gctacagtcacaattggtggcatcaacatagcagaggctcttgtaagtaaaggccttgcc
acagtcatcagatacagacaggatgatgaccagcgctcctcccactatgacgaactgctt
gccgcagaggcacgggccatcaaaaatgggaaagggctgcacagcaagaaggaggttccc
atccacagagtggctgacatctctggggagacacagaaagccaagcagttcctgcccttc
ctgcagagggctggccggtcagaggctgtggtagaatacgtcttcagcggctcgcgccta
aagttgtacatgccaaaagaaacctgcctcatcacattcctccttgccggtattgaatgt
ccacgcagttcccggaatacgcctggaggcatgcaggtggctgaaccctttagtgacgag
gccatgctgttcaccaaagagctggtgctgcaaagggaggtggaagttgaagtggaaagc
atggacaaagcagggaacttcattggctggctgcacattgaaggtgtgaatctgtctgtg
gcactggtagaaaatgctctgtccaaggtgcacttcacagcggagcgcagtgcctactac
aaaaccctggttgcagcagaggaggggtgccgacagaggaaagagaagatctgggccaat
tatgaggagaaaccagtggaggaggtcgtgcatctttcagaggagaaggagcgcgtggca
aactacaaaccagtctatgtcactgaaatcaccgacaccctgcacttctacgcccaggat
gtagagacaggaagtcagctggagagcctgatggagaccatgagagcagaaatcgccgcc
cagccaccagtggaaggatcctactctccacgccggggagactactgcatagccaagttt
gctgatggcgaatggtacagagccagagtggagaaagttgagtcaccggcaaaggtccat
gtcttctacattgactatggcaacagggaagttgtgtcatccacccgtctggctcccata
cctccggccttcagcaccaggaccctgccagtacaggccaccgagtataccttcgccttc
atccaggtcccccaggacgaggacgcccgtgctgatgtggtggactgcgtggtgcgagac
atccagaacacccagtgcctgttgaatgtggagtactcgggtgccacctgcccacacgtc
acaatacagtttggggacaccaaggaggacgtgggcctcggcttggtcaaagagggctta
gtcatggtggatgtccgcaaggagaagcatctgcagaagatggtgacagagtacctgaac
agtcaagaatctgccaagagtgccaggctcaacatttggcgctacggagacttccgtgcc
gacgatgcagacgagtttggttacagccgttaa
DBGET
integrated database retrieval system
