Oreochromis aureus (blue tilapia): 116335086
Help
Entry
116335086 CDS
T07295
Symbol
ushbp1
Name
(RefSeq) uncharacterized protein ushbp1
KO
K21881
Usher syndrome type-1C protein-binding protein 1
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oau03037
]
116335086 (ushbp1)
Cilium and associated proteins [BR:
oau03037
]
Primary cilia and associated proteins
USH complex and associated proteins
116335086 (ushbp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USHBP1_PDZ-bd
ANIS5_cation-bd
APG6_N
Motif
Other DBs
NCBI-GeneID:
116335086
NCBI-ProteinID:
XP_031614562
LinkDB
All DBs
Position
LG17:1966683..1976071
Genome browser
AA seq
682 aa
AA seq
DB search
MEDFRRSRCDSLDVGSRCDKEAMSPSDYIPLYHEGCDPAVILEPTPAELAQCEAEVGTLL
NIIAELNKKMGSLKAPSEPDDTRPPAPSRPLVPDLLSHRLVRSSPERNSPTSKPPLNDQG
GSGVVWSKLQEVLSSVEDSISFRRTWAAPITASDQEKHREHLRAAQENWVKASQILEEME
REFGISCPSTFPRDQYQEDTLDGDKQESALRSLPQSSISPVEEEKHKLVGLHKAWRSGGH
IPSYRSTAGALSPDWALPPYPGSPLLHRRANRAVTPLTVGGDGSPLGSVNSGSPCPSPLS
LESETERLNRCIERLKARNERLTAALERRKGESEQINLTLNRLESDCSALQTALRYCEEC
EEAYGELLSLYDARKQQSSPQQSVSAEPIGDSQDPDSPLAQLRKMGTEELSTSFSTAGVT
EETETPSHTGQRTPEDREAALRQQIERLKRDRAAICLPKAGPGVEARLSPPGQRGGHMTK
DKPADNKKEKASLFYELISVREEMSDLRALIRLKEKELRCLEWSLMGQKAQGAAGVFIPE
GLQEEVGDRRTEQQRLCENAAKLGCEGDVVGYRTRPILKELQAVLQREQALKKRLALVHE
SLNAAVSDSSSHRRDNAEQIARLTQAHSKALSSYRQIRRKYREQVWRLEQKLAASMESRH
GQGGAAKAAEEALEWRREETVL
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggaggatttcaggcgaagcagatgtgacagtctggatgtagggtcaaggtgtgacaag
gaggcgatgagcccgagtgactatatccccctctaccacgagggctgtgaccccgcagtc
atcctcgagcctacaccagcagagctggctcagtgtgaggctgaagtgggcacgctgctc
aacatcattgctgaactgaacaagaagatggggtcactaaaagcaccgagtgaaccagat
gacacgagaccgccggctccatccaggcctctggttccagatcttctgtctcaccggctc
gttagaagcagcccagaaagaaacagcccaacatctaaacctccgctgaatgaccaagga
ggcagtggtgttgtctggagcaaactccaggaggtcttatcatcagtggaggactccatc
agcttcagaaggacctgggcggcccccatcacagcttctgaccaggaaaagcacagagaa
catctgagagcagctcaagagaactgggttaaagccagccagatattggaagagatggaa
agagagtttgggatttcatgcccgtcaaccttcccaagagaccagtaccaggaagacacg
ctggatggggacaaacaggagtctgctctcagaagcctgccacagagcagcatcagcccg
gtggaagaggagaagcacaagctggttggtctccataaagcctggaggtctggcggccac
attccttcctaccggtccactgctggggccctaagtccagactgggccctgcctccctat
cccggttcacctttactccacaggagagccaacagagctgtgacgcctctgactgtgggt
ggggatggatctccactgggatcagttaactcgggcagtccctgtcccagccccctcagc
ctggagtctgagacagagcggctcaacagatgcatcgagaggctgaaggccagaaacgaa
cgtctcactgcagctctggagcgaaggaaaggagagtcggagcagatcaatctcacgcta
aacaggcttgagtccgactgctcggccctgcagacggctctcagatactgtgaggagtgt
gaagaggcctacggcgagctactgtcgctttatgacgccaggaagcagcaaagcagtcct
cagcagagtgtctcagcagagccaatcggtgacagtcaggacccagacagtccattagct
cagctgaggaaaatgggaactgaagagctgtccacctccttctcaacagcaggggtcaca
gaggagacggaaacaccgagtcacacggggcagaggacgcccgaggatcgggaggcggct
ctccggcagcaaattgagcgcctgaagagggaccgcgcagccatttgcctccctaaggca
ggtccgggagtagaggccagactgagcccacctggacaaagagggggtcacatgactaaa
gacaaacctgctgataacaagaaggagaaggcttccctgttttatgaactgatctcagtc
agggaggagatgtcagatctgcgagctttaatccgcctcaaggagaaagagctgaggtgt
ctggagtggagtttaatggggcagaaggctcagggagcagctggagtcttcatcccagaa
ggtctccaagaggaggtgggggatcgtaggactgaacaacagaggctctgtgagaatgca
gcgaagctcggttgtgaaggggacgtcgttggttataggacaagacccatcctgaaagag
ctgcaggcggtcctgcagagggagcaagccttgaagaagcggctggctttggtccatgag
tcactgaacgcggccgtctcagacagttcctcccacaggagggacaatgcagagcagata
gctcgcctcacacaagctcacagcaaagccttgagttcgtaccgtcagatacggaggaag
tatcgggagcaggtgtggcggctggagcagaaattggcggcctcgatggagagtcgacac
ggccagggcggagctgcaaaagctgcagaggaagccttggagtggaggagggaagagact
gttttataa
DBGET
integrated database retrieval system
