Oreochromis aureus (blue tilapia): 116335219
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Entry
116335219 CDS
T07295
Name
(RefSeq) coxsackievirus and adenovirus receptor homolog
KO
K06745
programmed cell death 1 ligand 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116335219
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
oau04090
]
116335219
CD molecules [BR:
oau04090
]
Proteins
116335219
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
NACHT
V-set
Ig_2
ig
C2-set_3
C2-set_2
V-set_CD47
AAA_22
NB-ARC
AAA_18
NPHP3_N
AAA_33
AAA
PCNA_C
nSTAND3
Motif
Other DBs
NCBI-GeneID:
116335219
NCBI-ProteinID:
XP_031614706
Ensembl:
ENSOABG00000011243
LinkDB
All DBs
Position
LG7:41806852..41815963
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AA seq
507 aa
AA seq
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MDWPLLIVLQVLFQPSLSVLFTVEAEQSLYTSEFGESVVMGCKFNPKPSYPHPDLNVTWH
WINSDSVQDVIRLDNGVARSESPKYRGRVQLLTEELAEGWAKLKMSSLRISDAGKYQCVV
HSADGADYKTITLSVEASYKPVTKRIERVATGDEVLITCQSEGYPKSTVEWQNGNLETLN
PNTTAESTPDQIFRITSQIKVSSTEKNNYTCKFTKDGPSATISIPDDIPLLPAKNDAVII
ILCIGVIVVLASVGVVTYRRRKGSHNHSTHSTRNLLERPAPTAASCLRSYDDNYENEITT
CNEGHVEENLGLYVKTHYSESFLSAERRNQCGTFSAEELPRRLQNNEGHPVNLPALLPGA
GETFFLEGLPGSGKTTVAHILISSWTEWPTDALSNFLDLSALRLLLYVDCSSVKGDLFQE
ITTQLPLTKKISTEKLRTLLITSGKALLLLDGYKEGNQYFDDSLRKFLSERTGCRVLVTA
SPGHCPVLRQTVGNEGVRKLQIQPAKY
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
atggactggccccttcttatagttttacaagtgttatttcagccctctctctcagtcttg
ttcactgtggaggcagagcaaagcctgtacacgtcagagtttggagaaagtgtcgtgatg
ggctgcaagttcaaccctaaaccctcctatcctcaccctgacctgaacgtgacctggcac
tggatcaactctgactccgttcaggacgtgatccggctggataatggcgtggcgcgctcg
gaatctccaaagtatcggggacgagtgcagcttctgaccgaggagctggcggaaggctgg
gctaaactgaagatgtccagtcttagaatcagtgacgccgggaagtaccagtgtgtggtt
cattcagcggatggagccgactataaaactataacgttgtctgttgaagcatcttataaa
ccagtgaccaaacgcattgagagggttgcaacgggtgatgaggtcctgataacctgccag
tctgagggataccctaagtcaacagttgaatggcagaatggaaacctggagacactcaat
cccaacaccactgctgaatcaacaccagaccagatttttagaatcaccagccagataaaa
gtcagctcaacagaaaaaaacaactacacctgtaaatttacaaaagacggcccctccgca
acaatttctattccagatgacataccacttcttcctgcaaaaaatgatgctgtcatcatt
atactgtgcataggagtgatagtggtattagcctctgttggagtggtcacctatcgacga
cgaaaaggatcccacaatcacagcactcacagcaccaggaacctcctggaaagacctgct
cctaccgctgcttcctgtctgagaagttatgacgacaactatgagaatgagataactact
tgtaatgaaggccatgtggaggaaaatctggggttgtatgtgaaaacgcattactcagaa
agctttctcagtgcagagcgaagaaatcaatgcggcactttcagtgcggaggagctgcct
cgcagactgcaaaacaatgaaggccaccctgtgaatcttcctgctttactcccgggagct
ggcgagacatttttcctcgagggacttcccggaagtgggaaaacaactgtagcccacatc
ctgatctcatcctggactgaatggcccacagatgccctttccaacttccttgacctcagc
gcacttcgtcttctcttatatgttgactgcagctccgtgaagggcgacttgtttcaggag
ataacaactcagcttccactcaccaaaaagatatcaacagaaaagctgagaactctttta
atcacatctggcaaggctctgcttttgttggacggctacaaagaaggaaaccaatatttc
gatgactcattaaggaagtttctaagtgaacgaacaggttgcagggtgctggtcacggcc
agcccaggacactgccccgtgctcaggcaaacggttgggaatgaaggagttcgaaagctt
caaatacaacctgcaaagtactga
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