KEGG   Oreochromis aureus (blue tilapia): 116335348
Entry
116335348         CDS       T07295                                 
Symbol
polr2d
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB4
  KO
K03012  DNA-directed RNA polymerase II subunit RPB4
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03020  RNA polymerase
oau03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    116335348 (polr2d)
  09124 Replication and repair
   03420 Nucleotide excision repair
    116335348 (polr2d)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:oau03021]
    116335348 (polr2d)
   03400 DNA repair and recombination proteins [BR:oau03400]
    116335348 (polr2d)
Transcription machinery [BR:oau03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     116335348 (polr2d)
DNA repair and recombination proteins [BR:oau03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      116335348 (polr2d)
SSDB
Motif
Pfam: RNA_pol_Rpb4 Tfb4
Other DBs
NCBI-GeneID: 116335348
NCBI-ProteinID: XP_031614876
Ensembl: ENSOABG00000006627
LinkDB
Position
LG14:complement(853355..859910)
AA seq 144 aa
MAAGGGAAPPHVGDVEEDASQLLFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELS
EVFMKTLNYTARFSRFKNRETITAVRSLLLQKKLHKFELASLANLCPEAAEEAKALIPSL
EGRFEDEELQQILDDIQTKRSFQY
NT seq 435 nt   +upstreamnt  +downstreamnt
atggcggctggaggcggcgcggctcctccgcatgttggtgatgttgaagaggacgcttct
cagctgctctttcctaaagagttcgagaacgcggagacgctactgaactccgaggtccac
atgttgctggagcacaggaagcagcagaacgagagcgccgaggacgagcaggagctgtcc
gaggtcttcatgaagaccctcaactacacggcccgcttcagccgcttcaagaaccgcgag
accatcacggccgtgcgcagcctcctgctgcagaagaagctccacaagttcgagctcgcc
agtttggccaacctgtgtccagaagccgccgaggaggccaaagccctgatccccagcttg
gagggtcgcttcgaggacgaggagctgcagcagatcctcgatgacatccagaccaagaga
agcttccagtactga

DBGET integrated database retrieval system