Oreochromis aureus (blue tilapia): 116335375
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Entry
116335375 CDS
T07295
Symbol
xrcc5
Name
(RefSeq) X-ray repair cross-complementing protein 5
KO
K10885
ATP-dependent DNA helicase 2 subunit 2
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
116335375 (xrcc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oau03400
]
116335375 (xrcc5)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA-PK complex
116335375 (xrcc5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Ku_N
Ku_PK_bind
Ku_C
DUF6005
DUF4599
Motif
Other DBs
NCBI-GeneID:
116335375
NCBI-ProteinID:
XP_031614909
Ensembl:
ENSOABG00000020699
LinkDB
All DBs
Position
LG16:14214172..14227719
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AA seq
723 aa
AA seq
DB search
MAGSKTAVVLCMDVGLTMSNSAPGEESSFELAKKVIQKFVQRQVFSETKIELALVLFGTD
STDNPLSQDGQYQNIRVHRHLRIPDCELLIEIENQVQPESKEGDWLDALVVCMDLLHTET
KGKKYDCLNIALLTDLNTQTNEESLEVIINNLTQSGITMQFFLPFPVEEDKEGQGDSERR
DPGHPGTGKGLSREQKKNMELVKEMMLSLDVEDGLDEIHTFRNAIEELCMFKRVERRPVA
WPCQLTIGSSLSIRIIGYKAVTDEKPKKMWITVDAQSHQKDDVKRETVYCLDDDNETEVQ
KDDIIQGFCYGSDIVPFSKVDQEQMKYKHDGKCFAVLGFTKQSAIHRHQFMGSQILKIFA
ARDDEHAGVALSALIHALNELQMVAIVRYAYNRTSNPEVGAAFPCIKQDSECLMYVQLPF
MEDLRHFTFPSLENKKFTPSDAQLSAVDSLIDSMMLVEEDENGEQRDLFKPHRIPNPAFQ
RHFQCLHHRAVSPGTPLPPIEPWLKAALDRPEVITERCQDPLDVLKRKFPLTEVEKKKKL
KTSAQIFGKESEESEAKKVKEDEAEEYNLANIAEGSVTSVGSVDPARDFRALIKQKILPF
GEVCQQLTHRIEQLLSNKNTQYYMKSITCIQAFREQSVKLANAEHYNSYLQSLKGSIPNR
GLEVFWELLVQDGLTLISKDEVEGSTVSKAEANQFLVAEEQKEEAAPAPVEDTGDVDDLL
DMM
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcaggctctaaaacagctgtggtgctgtgcatggatgtggggcttaccatgtccaac
tctgcaccgggggaagagtcttcctttgaacttgccaaaaaagtcatccagaagtttgtc
cagcgccaggttttttcagagacgaagattgagctggctttggtcctgtttggcacagac
tccacagacaaccctctgagccaggatggccagtaccagaacatcagagtacatcgacac
ctcaggatccctgactgcgaactactgatagagattgaaaatcaggtccaaccagagagt
aaggagggtgactggctggatgcccttgtagtttgcatggatcttcttcatactgaaaca
aaggggaaaaagtatgattgtctcaacattgccctgctgactgacctcaacacccagacc
aacgaagaaagcctggaggttatcatcaacaacctcactcaatctggcatcaccatgcag
ttctttttgcctttccctgtggaagaggataaggagggtcaaggggattcagagagaaga
gatcccggtcacccggggacaggcaaaggtctgtccagggagcagaagaaaaacatggaa
ttggtgaaagagatgatgctgagcctggatgtggaggacggcctggatgaaattcacacc
ttcaggaatgcgatcgaggagctgtgtatgttcaagcgggtggagaggcgacccgtggcc
tggccctgtcagctgaccataggcagctctctctctatccgaatcattggctacaaagca
gtgaccgatgagaagccgaagaaaatgtggattacagttgacgctcaatctcaccagaaa
gatgacgtgaagagagaaacggtttactgcctggatgatgacaacgagacagaggtgcaa
aaggacgacatcatccaaggtttttgttatggaagtgacattgttcccttctccaaggtc
gatcaagaacagatgaagtacaagcacgatgggaagtgcttcgctgtgctgggattcacc
aaacagagcgcgatacatcgtcatcagtttatgggttctcaaatcctcaaaatctttgct
gcgagggatgatgagcatgcaggagtggctctgtcagctcttatccacgcgctgaatgaa
ctccagatggtggctattgtacgctacgcttataaccgcaccagcaaccctgaggtgggc
gcagcgttcccctgtatcaagcaggactctgaatgcctgatgtacgtccagctgccgttc
atggaagacctcagacatttcacgtttccttctcttgaaaacaaaaagtttactccatca
gatgctcagctgtctgctgtggactctctgattgactccatgatgttggtagaagaagat
gagaacggagaacaaagagacttgttcaagccccatcgcattcccaaccctgccttccag
aggcacttccagtgtctgcaccatcgggcagtaagccccggtacccctcttcctccgata
gagccatggctgaaagctgctcttgatcgtcctgaggttattacagaacgctgccaggat
ccacttgacgtgctgaagaggaaatttcctctcactgaagtggagaagaaaaagaagctt
aaaactagtgctcagatttttggcaaagagtcagaggagtccgaggcaaagaaagtaaaa
gaagacgaagcagaggagtataacctggccaacattgctgaaggctctgttacctcggtg
ggaagtgttgacccagctcgagacttccgcgctttgatcaaacagaaaattcttccgttc
ggagaagtctgccagcagctgactcacaggatagagcagttgctaagcaacaagaacaca
cagtactacatgaaaagcatcacctgtatccaggctttcagagagcaatccgttaagctg
gcaaatgctgaacactacaatagctacctccagtccctgaaaggaagcatcccaaacaga
ggactagaggtgttctgggaactgctcgttcaagatggtttaacgctgatcagcaaggat
gaggtggaaggaagcaccgtctccaaagccgaagctaatcagtttctggttgctgaggag
cagaaagaggaggcagctcctgcaccagttgaagatactggagatgttgatgacttgctg
gatatgatgtaa
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integrated database retrieval system
