Oreochromis aureus (blue tilapia): 116335427
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Entry
116335427 CDS
T07295
Name
(RefSeq) host cell factor 1-like isoform X1
KO
K14966
host cell factor 1
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03083
Polycomb repressive complex
oau04980
Cobalamin transport and metabolism
oau05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
116335427
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
116335427
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
116335427
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
oau01009
]
116335427
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116335427
03029 Mitochondrial biogenesis [BR:
oau03029
]
116335427
Protein phosphatases and associated proteins [BR:
oau01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116335427
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
116335427
HMT complexes
COMPASS/SET1 complex
116335427
MLL-HCF complex
116335427
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
116335427
Mitochondrial biogenesis [BR:
oau03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
116335427
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
fn3
Motif
Other DBs
NCBI-GeneID:
116335427
NCBI-ProteinID:
XP_039459835
Ensembl:
ENSOABG00000015051
LinkDB
All DBs
Position
LG20:4895618..4917309
Genome browser
AA seq
1720 aa
AA seq
DB search
MEAKPGSPVVLQPRWKRVLGSTGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLK
AKAPKNGPPPCPRLGHSFSLIGSRCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPATSGPPPPPRESHTAVVTTNHGASRLIIYGGMSGCRLGDLWVLDIDSLVWSKPG
LGGTAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMCW
ETVLMDTSEENIPRARAGHCSVAINSRLYIWSGRDGYRKAWNNQVCCKDLWYLETERPCA
PSRVQLVRANTTSLEVSWGPSQTADTYLLQLQKYDIPATPAASSPATTPSPTIATPGASS
PKSSVPVTAAPANQTVPLSSITLVPTPTASVAGTPLAAAAKAPAILKVPSAPGTTGGASI
VTVRQAMPKSPVGVTTLPAGVRMVVPAQPGQTPIGSNPQMSGMAALAAAAAATQKIPPST
ATVLNVPAGATLVKTVAVSPGTSSLPVKVVSNVATGMLKTAAAQVGGASVSTPGTPSRPI
ITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLSMGGGGTLLSNLSSLGKVVSVVQT
KPVQSGAVTVQAGSSAVTQILQAKGGLPAGTILKLVSSADGKQTTILSTAQAGSSAGKPT
ILGVAPAASKPGTTIIKTIPVSALQGGAGGNSPITILTTKMVTPGTAGKIITTVPKVSAG
GQQGVTQVVLKGAPGTPGTILRTVPMSGVRLVSPGGVGSKPGTVTTLVVKGTTGVSSLGT
VTGNVSTTVAGAAGTQVNASLATPITTLATIATLASQVTTATAAAGPKQVTLITTPSGAE
AQPVVQDLPVSIMASPTSEEPGSTTITSTTTTAQGETGESAVAAVTMVCSNPPCETHETG
TTNTATVASANIGGSNQVCSNPPCETHETGTTNTATVASANIGGSNQVCSNPPCEMHETG
TTNTATVATANILGNNQVCSNPPCETHETGTTNTATVASANIGGSNQVCSNPPCEMHETG
TTNTATVASASMRQELQMSSNQPAAQQSAPPAVILNTCSNPPCETHETGTTNTATTAGVG
GLQQVCSNPPCETHETGTTNTATTAGAGGLQQVCSNPPCETHETGTTNTATTATAQQGGD
SQQGESTEPSTSEPPSTAANQSRAVTTVTQATPTPGPSIPEISSLVGQPREESSEAVAMD
TAAADEGEEPMQTDSQAEDVMSSAAVLHVHVEGGDTAAQIASSDGGLPQELMSSEGDGGE
DVSGTTTTLMVTGALTPDQLAVTTATEEAAQQATIQAVLQAAGHIGDAEGSEQSIPIVLT
QQELAALVQQQQQLQGIHQPEPEPEPEPEPQHSSIPTEGLAPADSLNDPAADTSNGHELA
SSAVTSAVARLASTFGPAPTLTSGQVKNEAPAALPEAPNGIAPPAPVKTSVKEDRWFDVG
IVKVTNMVVSHYYVPYDDNTPDDDSGAVPDYSRMRKVELQPGTAYKFRVAGINICGRGAF
SEVSAFKTCLPGFPGAPCAIKISKNLDGAQLTWEPPAVTSGKITEYSVYLAIHSSQASSS
SSSSSGSGATQLAFMRVYCGPNPSCLVQSSSLANAHIDYTTKPAIIFRIAARNQKGYGPA
TQVRWLQETSKDPKAAVKRPGSGPAADLKSAGPKKFRTDQ
NT seq
5163 nt
NT seq
+upstream
nt +downstream
nt
atggaagccaagcccgggagtccagtggtgctacagccccgctggaagcgcgtcctagga
tcaactggtccagtcccacggccccggcacggacacagggccgtagccattaaggagctg
atggtggtgttcggcggggggaacgaggggatcgtggacgagttgcatgtctacaacaca
gccaccaaccagtggttcatccctgcagtccgtggtgacatcccccctggctgtgccgcc
tatggcttcgtgtgtgacgggacgaggctgctggtgttcggagggatggtggagtacggc
aaatacagcaacgacctatacgagctgcaggcaagtcgctgggagtggaaacgtctgaag
gccaaagcgccaaagaatggcccacccccctgcccccgtcttggacacagcttctctctg
attggaagccggtgctacctttttggtggactagccaatgatagcgaagatcccaaaaac
aacatccccagatacctgaatgacctgtactgtctggagctgcggccgggctccagcgtg
gtcggctgggagattccagcaacgtctggcccaccaccaccacccagagagagtcacacg
gcggtggtgacaacaaaccacggagccagcaggctaatcatctacggaggcatgagtggc
tgccggctgggggacctgtgggtcctcgacatagactctcttgtgtggagcaaaccaggc
ctcggtgggacggcccccctacctcgcagtctgcactctgccaccaccatcaacaacaag
atgtatgtttttggaggttgggttcctctggtgatggatgatgttaaagtggcaactcat
gagaaggagtggaagtgcaccaacacactggcctgcctcaacctggacacgatgtgctgg
gaaacggtgctgatggacacttcggaggagaacattcccagagctcgtgcaggtcactgc
agcgtcgccatcaactccagactttatatctggagcggcagagatggatacaggaaggcc
tggaacaaccaggtgtgctgcaaggacctctggtacctggagaccgagcgtccctgtgcc
ccttctcgggtgcagctggtgcgggcaaacactacgtctttggaggtgagctgggggccg
tcacagactgcagacacctacttgctacagctgcagaagtacgacattcctgccacacct
gcggcctcctcacctgccacaaccccttcccccactattgccacacctggagccagctcc
cccaaaagctctgtccccgtcacagcagcaccagccaaccaaactgtccccctgtccagc
atcacactcgtccctactcccactgcatctgtagctggaaccccattggctgcagctgct
aaagcaccagcaatcttgaaagtgccatcagctccaggtacaacaggtggagcctccatc
gtcacagtgagacaggccatgcccaagtcgccggttggtgtgacaacacttcctgcaggt
gttcgtatggtggtacctgctcagcccggtcaaacgccaatcggtagcaatcctcagatg
agtggcatggcagcattggcagcggcagctgcagcgactcagaagatccctccatctacg
gcaactgtgctgaatgtccccgcaggagctacgctagtgaagacggtcgctgtcagtcca
ggaacgagcagtctgcctgtcaaagtggtgagtaacgtggccacgggaatgttgaagacg
gctgcagcccaggtgggtggggcctctgtctccacccctgggacccccagcaggccaatc
atcacggtccataagtcgggcacggtgaccgtctctcagcaggctcaggtggtcacaacg
gtggtgggtggagtcacaaagaccatcactctggttaacagcccactgagcatgggagga
ggcgggacactgctcagtaacctcagcagcctggggaaagtggtatcagtggtccagacc
aaaccagttcagagtggtgccgttactgtccaggctgggagcagcgcagtaactcagatc
ctacaggctaagggcggtctccctgcaggaaccatcctgaagttggtatcgtctgccgat
ggtaagcagaccaccatcctcagcacggcacaggctggatcctcagcagggaaacccacc
atcctgggcgtcgcgccggcagcctccaaacccggaaccaccatcattaagaccatccca
gtgtcagctttgcagggaggcgcaggtggaaacagtccaatcaccatcctgactaccaag
atggtgactccagggaccgctggaaaaatcatcaccaccgtgccaaaagtgtctgcaggt
ggccagcagggggtcacacaggtggtgttgaaaggagctccaggtacgccgggcacaata
ctcaggaccgtcccgatgagcggagtcagactggtgtcaccaggaggtgttggcagcaag
cccggcacagtaaccacgctggttgtcaagggaaccacaggtgtctccagtctggggacg
gttacaggaaacgtctccactaccgtggcaggagccgccgggactcaggttaacgcctcc
ttggcaacaccaatcaccaccctggcaactattgccacactggctagccaggtcacgaca
gccacagctgctgctggacctaagcaggtgactctgatcacaacaccaagcggtgcagag
gctcagccggttgtccaggatctgccagtctctatcatggcttctcctacttcagaggaa
cctggaagtactacgattacgagtacaacaactactgcacagggagagactggggaaagt
gcagttgctgcagtgacaatggtctgctccaacccgccctgtgagacgcacgagacaggg
acgaccaacaccgccactgtcgctagcgcaaacatcggcggtagcaaccaggtgtgctca
aaccctccctgtgagacacacgagacgggaacgacaaacaccgctaccgttgccagcgcg
aacatcggcggtagcaaccaggtgtgctcaaacccgccctgcgagatgcacgagacagga
acaactaacactgccacggtcgccactgcaaatatcctcggtaataaccaggtgtgctca
aaccctccctgtgagacgcacgagacgggaacgaccaacaccgctaccgttgccagcgcg
aacatcggcggtagcaaccaggtgtgctcaaacccgccctgcgagatgcacgagacagga
acaactaacactgccacggtggcctcagcaagcatgagacaggagctgcagatgagttca
aaccagcctgcagctcagcagtcagctccacctgctgtcattctgaacacctgctcaaat
ccaccgtgtgagacccacgagactggaaccaccaacaccgccaccactgctggagttggt
gggctccaacaggtgtgttcgaatccaccatgtgagacccacgagaccgggaccaccaac
actgccaccactgctggagctggagggctccaacaggtgtgttcgaatccaccatgtgag
acccacgagactggaaccaccaacacagccactactgctacagctcagcagggtggagac
agccaacagggagagtccacagaaccttccacatctgagcccccctccacagcagccaat
cagagcagagctgttactactgttacacaggccacgcccacaccaggaccatccataccc
gagatctcctcgttggtcggacagccacgcgaggagtcctcagaggctgttgctatggat
acggcagcagcagatgagggggaggagcctatgcagacagacagccaagcagaggatgtg
atgtcatcagcggcagtgttacacgttcatgttgagggcggtgatacggcagcacagatt
gcgtcctcagacggtggtcttcctcaggagctgatgtcgtccgaaggggacggaggcgag
gatgtctctgggacgacgacaaccctgatggtgacgggggcgctgacgccggatcagctg
gctgttaccacggcaacagaggaagcagcccagcaggcgacgatacaggcagtactgcag
gcagcggggcatatcggtgacgctgagggctcagagcagtctattcccatcgttctgacc
cagcaggagctggcagcgctcgtccaacagcagcagcaactgcagggcatccaccaacca
gaacctgagcctgagccagaaccggagccacagcacagcagcatccctacagagggcctt
gctcccgcagacagcctcaacgacccggcagccgacacgagtaacggacacgagctggca
tcatcggcggtaacgagcgctgttgcacgactggccagcacgtttggtcccgcccccact
ctgacatcagggcaggtgaagaatgaagcacctgctgcactgccagaggcacccaacggc
atcgcaccgcctgcgccggtgaagacgtcggtgaaggaggatcggtggttcgacgtcggc
atcgttaaagtcaccaatatggtggtctcacattactacgtcccctacgacgacaacaca
cctgacgacgactcgggcgcggtcccagactacagtcgaatgagaaaggtggagctacag
ccggggacagcctacaagttccgtgtggcgggcatcaacatctgcggccgcggcgcattc
tcagaggtgtcggcgtttaaaacgtgcctgcccggtttccccggagcgccctgcgccatc
aagatcagcaagaacctggacggggcccagctgacttgggagcctcctgccgtcacgtcg
gggaagatcacggagtactccgtctacctggccatccactccagccaggcttcctcctcc
tcctcatccagttcaggttctggtgccacccagctggccttcatgagggtctactgtggc
cccaacccgtcctgcctggtccagtcctccagcctcgccaacgcacacatcgactacaca
accaaacccgccatcatcttccgcatcgcagctcgcaaccagaagggctatggtcccgcc
acgcaggtccggtggctgcaagaaaccagtaaagaccccaaagcagcggtgaagagacca
ggatcaggacccgctgcagaccttaaatctgccggaccaaagaagttcagaaccgaccaa
tag
DBGET
integrated database retrieval system
