Oreochromis aureus (blue tilapia): 116335512
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Entry
116335512 CDS
T07295
Symbol
polr2b
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03020
RNA polymerase
oau03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
116335512 (polr2b)
09124 Replication and repair
03420 Nucleotide excision repair
116335512 (polr2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116335512 (polr2b)
03400 DNA repair and recombination proteins [BR:
oau03400
]
116335512 (polr2b)
Enzymes [BR:
oau01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
116335512 (polr2b)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
116335512 (polr2b)
DNA repair and recombination proteins [BR:
oau03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
116335512 (polr2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
116335512
NCBI-ProteinID:
XP_031615083
Ensembl:
ENSOABG00000019220
LinkDB
All DBs
Position
LG2:complement(329827..357302)
Genome browser
AA seq
1200 aa
AA seq
DB search
MYDQDEDNQYDEDDDEITPDLWQEACWIVIRRSLWRVGLLLTWQIALQQSQLVCRHNSYF
DEKGLVRQQLDSFDEFIQMSVQRIVEDAPPIDLQAEAQHTSGEVEEPPRYLLKFEQIYLS
KPTHWERDGAPSPMMPNEARLRNLTYSAPLYVDITKTIIKEGEDQLQTQHQKTFIGKIPI
MLRSTYCLLSGLTDRDLCELNECPLDPGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSK
YAYTAECRSCLENSSRPTSTIWVSMMARGGQGVKKSAIGQRIVSTLPYIRQEVPIIIVFR
ALGFVSDRDILEHIIYDFDDPEMMEMVKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKER
RIKYAKEVLQKEMLPHVGVSDFCETKKAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLD
LAGPLLAFLFRGMFKNLLKEIRIYAQKFIDRGKDFNLELAIKTRIISDGLKYSLATGNWG
DVKKAHQARAGVSQVLNRLTFASTLSHLRRVNSPIGRDGKLAKPRQLHNTLWGMVCPAET
PEGHAVGLVKNLALMAYISVGSQPSPILEFLEEWSMENLEEISPAAIADATKIFVNGCWV
GIHKDPEQLMNTLRKLRRQMDIIVSEVSMIRDIREREIRIYTDAGRICRPLLIVEKQKLL
LKRRHIDQLKEREYNNYSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYT
HCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYP
QKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSY
KEQESKKGFDQEEIFEKPTRETCQGMRHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLP
ENDDELDSTNRRYTKRDCSTFLRTSETGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDK
FASRHGQKGTCGIQYRQEDMPFTCEGITPDIIINPHAIPSRMTVGHLIECLQGKVSANKG
EIGDATPFNDAVNVQKVSNLLSEYGYHLRGNEVLYNGFTGRKLTSQIFIGPTYYQRLKHM
VDDKIHSRARGPVQILNRQPMEGRSRDGGLRFGEMERDCQIAHGAAQFLRERLFEASDPY
QVHVCNLCGLMAIANTRTHTYECRGCRNKTQISLVRMPYACKLLFQELMSMSIAPRMMTS
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaccaggatgaagataatcagtatgatgaagatgatgatgagatcactcctgac
ctgtggcaggaagcgtgctggatcgtcatcagacgatctttgtggcgtgtcggtcttttg
ctaacctggcagattgcgctgcagcagtcccagctggtttgtagacacaactcttatttt
gacgagaaagggctggtgcggcagcagctagattccttcgatgagttcattcagatgtct
gttcagaggattgtggaagacgctccgcccatcgacctgcaggctgaagctcagcacacc
tcaggggaggtggaggagccgcctcggtacctcctgaagtttgagcagatctacctgtct
aagcccacccactgggagagagatggagcaccatctcccatgatgcccaacgaggcgcgg
ctgaggaacctgacgtactctgcgccactgtatgtggacatcacaaagacaatcatcaag
gagggagaggatcagttgcagacgcagcaccagaagaccttcattgggaaaattcccatc
atgcttcgctccacgtactgcctgctaagtggcctgactgaccgagacctgtgcgagctc
aacgagtgcccattggaccccggaggttacttcatcatcaatgggtcagaaaaggtgctg
atcgctcaggaaaagatggccaccaacacagtgtacgtgtttgccaagaaggactcgaag
tacgcgtacaccgcagagtgccgatcctgcctggagaattcatcccgcccaaccagcaca
atctgggtcagcatgatggctcgaggagggcagggagtgaagaagagtgccataggtcag
aggatcgtctccacgcttccctacatccgacaggaagttcccatcatcatcgtgttccgg
gcactgggcttcgtatcggacagagacatcctggaacatatcatttatgactttgatgac
cctgagatgatggagatggtgaagccctctctggacgaagcttttgtgatccaggagcag
aacgtggcgttgaacttcattggctcacgaggcgcaaaacccggtgtgacgaaggagcgg
cggattaaatacgcaaaggaagtcctgcaaaaggagatgctgccacatgtcggcgtaagc
gatttctgcgagaccaagaaggcctacttcttagggtatatggtgcacaggttgctgctc
gccgctctcggcaggcgggaactggatgacagagatcactatggcaacaagaggctggac
ctcgccgggccattactggccttcctgttccgaggcatgtttaaaaacctgctgaaggaa
atcaggatctatgctcagaagttcatcgaccgcgggaaggatttcaacctagagctcgcc
attaagacgcgtatcatctctgacgggctcaagtactctcttgccacaggtaactggggc
gacgtgaagaaggctcaccaggcccgagccggcgtgtcacaggtgttgaaccgtctcacc
ttcgcatccacactgtctcacctgcgccgggtcaactctcctatcggtcgagatggaaaa
ctggcgaaacctcgacagttgcacaacacgctgtgggggatggtgtgtccggccgagacg
cccgagggtcacgctgtggggctggtgaagaacttggccctgatggcctacatctctgtg
ggctcgcagccatcgcccatcctggagtttctggaggagtggagcatggagaacctggag
gagatctcacctgcggccattgcagatgccactaaaatctttgtgaatggctgctgggtg
ggaatccacaaagatccagaacagctgatgaatacactgaggaaactccgcagacagatg
gacatcatcgtctctgaggtgtcaatgatcagagacattagagagcgtgagatcagaatt
tacacggacgctggacgaatctgccgaccgctgctgatcgtcgagaaacagaaactgctg
ctgaagagacgccacatcgaccagctgaaggagcgcgagtacaacaactacagctggcag
gacttagtggccagcggtgtggtggagtacatagacaccctagaagaggagaccgtcatg
ctcgctatgaccccagatgacctccaggagaaaggcgtggcctattgttccacctacacc
cactgtgagatccatccatctatgatccttggagtgtgcgcgtccatcatcccgttcccc
gatcacaaccagtctcccaggaacacgtatcagtccgccatggggaagcaggccatgggt
gtttacatcaccaacttccatgttcgaatggacacgctcgctcacgtactgtactaccct
cagaaaccactcgtcaccactcgctccatggagtacctgcgcttcagggagctccccgca
ggtatcaactcgattgtggcgatcgcctcatacaccggctacaaccaggaagactctgtg
atcatgaacaggtcagctgtggatcgaggattcttcaggtctgtgttctatcggtcatac
aaagagcaggagtctaagaaaggctttgatcaggaggagatctttgagaagccgacacgt
gaaacctgtcaagggatgcgacatgccatctatgacaagctggatgacgatggactcatc
gcacctggcgtccgtgtttctggcgaggacgtgatcattgggaagacggtgacactgcca
gagaatgacgacgagctggatagcacgaaccgccgctacacgaagagagactgcagcacg
tttctgaggaccagtgagacgggcatcgtggaccaggttatggtgaccctgaatcaggag
ggctacaagttctgcaaaatcagggtacgctctgtccgaattcctcagatcggcgacaaa
ttcgccagccgacacggacagaagggaacctgtgggatccagtacagacaggaggacatg
ccattcacctgtgaggggatcactcctgacatcatcatcaaccctcacgccattccgtcc
agaatgacagtcggccatttgattgagtgtctgcaggggaaggtgtctgccaacaaaggt
gagatcggtgacgccacgccatttaacgatgccgtcaacgtgcagaaggtgtcaaacttg
ctgtctgaatatggataccatctcagaggaaatgaggttctgtataacggcttcactggg
aggaagctgacatctcagatctttatcggcccgacatattaccagcgcctgaagcacatg
gtggacgataagatccactcgagagcccgcggcccggtccagatcctcaaccgacaaccc
atggaggggcgctcacgtgatggtggtttgcggtttggcgagatggagcgtgactgtcag
attgctcacggagcagctcagttcctgagggagcgtctgttcgaggcgtctgatccctac
caggtgcacgtttgtaacctgtgcggactgatggccatcgccaacacgcggacacacacg
tacgaatgtcgtggttgccgcaacaaaacccagatctctctggtgcggatgccgtacgcc
tgtaagcttctgttccaggagttgatgtcaatgagcattgctcctcgtatgatgacatca
taa
DBGET
integrated database retrieval system
