Oreochromis aureus (blue tilapia): 116335648
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Entry
116335648 CDS
T07295
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116335648 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oau03041
]
116335648 (dhx8)
Enzymes [BR:
oau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
116335648 (dhx8)
Spliceosome [BR:
oau03041
]
Complex C
Other components
Step II factors
116335648 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_16
T2SSE
Flavi_DEAD
TsaE
PhoH
Sigma54_activ_2
ABC_tran
RSRP
Motif
Other DBs
NCBI-GeneID:
116335648
NCBI-ProteinID:
XP_031615257
Ensembl:
ENSOABG00000010832
LinkDB
All DBs
Position
LG8:6389212..6399078
Genome browser
AA seq
1213 aa
AA seq
DB search
MTDIGVDELSQLEYLSLVSKVCTELDNHLGINDKDLAEFVISLAEKQPSFDGFKALLLEN
GAEFTDSLISNLLRLIQTMRPPSKASTSKASESVAKPKSEKEKLREMFPALCRPNEPAPK
ALLDEDDVKVAADAMKELEMFMPSVSGTDSKGSKNRSEKNRRSRSRSREKDRHRDRDRDR
EKDRKRRHRSRSYSRSRSRSRDRDRHRDRDRDRGKRRDKSSRWSERSPSPRKDQERESDR
WRDKHVDRPPPEEPSVGDIYNGKVTSIMQFGCFVQLEGLRKRWEGLVHISELRREGRVAN
VADVVSKGQRVKIKVLSFTGSKTSLSMKDVDQETGEDLNPNRRRNVGPDGGEEISMRNPD
RPSNLNLGHAPELEQDDTLERKRLTKISDPEKWEIKQMIAANVLSKEEFPDFDDETGILP
KVDDEEDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERR
ELKQAAREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPNDIPEWKKHAFGGNK
ASYGKKTQLSILEQRESLPIYKLKEQLVQAVHDNQILIVIGETGSGKTTQITQYLAEAGY
TARGKIGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLL
RECLIDSELGQYAIIMLDEAHERTIHTDVLFGLLKKTVQKRTDMKLIVTSATLDAVKFSQ
YFYEAPIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEID
TACEILYERMKSLGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLT
IDGIYYVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERA
YRDEMLTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGAL
DDEGLLTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQAL
ADQKKAKFHQPEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMD
RHKLDVVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPE
WVVYHELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTRLSKQKKQQRLEPLYNRYEE
PNAWRISRAFRRR
NT seq
3642 nt
NT seq
+upstream
nt +downstream
nt
atgacagacatcggagtcgacgagctatcgcagctcgaatatctgtctttagtgtcgaaa
gtctgcacggagcttgacaaccatctgggaataaatgacaaagatttagctgaatttgtc
atcagccttgccgaaaaacaaccgagctttgatggattcaaagcacttttactcgaaaat
ggagccgaattcacagattctctcatcagtaatctgctcaggctcattcagacgatgcga
cctccatccaaagcatctacaagtaaagcatccgagtccgtggctaagccgaagtcagaa
aaggaaaagctgagggagatgtttcctgcactgtgtagaccaaatgagccggcaccgaag
gctctgctggatgaagatgatgtaaaagtagcagctgatgccatgaaggaactggaaatg
ttcatgcccagtgtcagcgggacagactcaaaagggagcaagaacagatcagaaaaaaac
aggcgaagtcgcagcagaagcagagaaaaagacagacacagagatcgagacagagatcgg
gaaaaggaccgaaagagacggcatcgttcccgatcctattccagatccaggtcacgctcc
agagaccgtgatcggcatagagatagagatagagaccgtggcaagagaagagacaaatct
tcccgctggtctgagcgctcacctagtccgagaaaagaccaagagagagagtctgaccgc
tggagggacaaacatgtggatcgccctccacccgaggagccttctgttggtgatatctac
aatggaaaggttaccagcatcatgcagtttggatgctttgttcagcttgagggactcagg
aagcgatgggagggtctggtccacatttctgagctgcgcagggagggccgtgtggccaac
gtggccgacgttgttagcaaaggccaaagagtcaaaatcaaggtgctctcattcacaggg
tccaagaccagcctcagtatgaaggatgtagaccaggagacgggagaagacctgaacccc
aacaggaggaggaacgtcggccccgacggaggagaggagatctccatgaggaatcctgat
cggccgagcaacctgaacctcggccacgcgccggagctggaacaggatgacacactggag
cgcaagaggctcaccaaaatctcagacccagagaagtgggagatcaaacagatgattgct
gccaatgttttgtccaaagaagaatttcctgattttgatgatgagacaggcatccttcct
aaagttgatgatgaagaagatgaagacttggaaattgagctggttgaagaggaaccaccg
tttctgagaggccacacaaagcaaagcatggacatgagcccagtcaagattgtcaagaat
ccagatggctcgctgtcccaggcagccatgatgcagagtgctctggcaaaagagagacga
gaactgaagcaggcggcgcgggaagcagagatggactccatccccatggggctgaacaaa
cactgggttgacccgctgccagacgttgatggtcgacagattgccgctaacatgagaggc
attggcatgatgcccaatgacatcccagagtggaagaaacatgcgtttggagggaacaag
gcatcctatggaaagaagactcaactctctatcttggagcagagagagagcttacccatc
tacaagctgaaagagcagctcgttcaggctgttcacgacaaccagatcctgatcgtcatt
ggagagacgggatctggaaagaccacacagatcacccaatacctggcagaggctggttac
acagccagggggaagattggctgtacgcagccccgtcgtgtggctgccatgtcagtggct
aagagagtttctgaggagtacggttgttgtctgggacaagaggtgggctacaccatccgt
tttgaggattgcacaagtcctgagactgtgatcaagtacatgacagacggtatgctgttg
agagagtgtttgattgactccgagttgggccagtacgccattatcatgttagatgaagct
catgagaggacaatccacactgatgttctttttggcctcctcaagaagactgtacaaaag
cgcacagacatgaagctgattgtgacatcagctacactggatgctgtgaagttctctcag
tatttctatgaagcacccatcttcaccatccctggcagaacgtatccagtagaggttctt
tacaccaaagaacctgagacggactacctggatgccagcctcatcactgtcatgcagatt
catctgactgagcctccaggagacatcctggtgtttttaactggacaggaggagatcgac
acagcctgtgagatcctttatgagagaatgaagtcacttgggcctgatgttcctgaactg
atcattctgccagtttattctgccctgcccagtgagatgcagaccagaatctttgaccca
gcacccccaggcagcagaaaggttgtcatcgccacaaacattgcagagacctctctgacc
atcgatggaatctattatgttgtagatccaggctttgtcaagcagaaagtgtacaactct
aagactggcattgatcagctggtggtgacgccaatctcacaggctcaggctaagcagagg
gcaggtcgtgccggcagaacaggtcctggaaagtgttacaggctgtacactgagagagcc
tacagagatgagatgctgacaaccaatgtacccgaaatccagagaaccaacttggccagc
actgtgctgtcgctgaaggcaatgggcatcaatgatctgctgtcttttgacttcatggac
gctcctcctatggagactctgatcacagccatggagcagctctacaccttaggagctctg
gacgatgaaggcttactcacacgactgggtcgaaggatggctgaattccctctggagccc
atgttgtgtaagatgctgatcatgtctgtccatctgggctgcagcgaagagatgctcaca
atcgtgtcgatgctgtctgtgcagaatgtcttttacaggcctaaggacaagcaggccttg
gctgaccagaagaaggcaaagttccaccaacctgagggcgatcacctcaccctgctagct
gtctacaactcctggaagaacaacaagttctccaacccctggtgctacgagaacttcatc
caggctcgctccctgcgcagagcccaggatatccgcaaacagatgctggggatcatggac
agacataaactggatgtagtatcttgtggtaaagccactgtgcgagtccagaaagccatc
tgcagtggtttcttcaggaatgcagccaaaaaggatcctcaggagggctacagaaccctg
atagaccagcaagttgtttacatccacccctccagtgctctgttcaaccggcagcctgag
tgggttgtgtaccacgagctggtgctgactaccaaggagtacatgcgtgaggtgaccacc
atcgaccctcgctggctggtggagttcgcacctgccttctttaaagtgtccgaccccacc
cgcctcagcaagcagaagaaacaacagcgcctcgagcccctctacaaccgttacgaagag
cccaacgcttggagaatctcacgcgccttcagacgccgataa
DBGET
integrated database retrieval system
