Oreochromis aureus (blue tilapia): 116335892
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Entry
116335892 CDS
T07295
Name
(RefSeq) E3 ubiquitin-protein ligase Topors-like
KO
K10631
E3 ubiquitin-protein ligase Topors [EC:
2.3.2.27
]
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oau04121
]
116335892
03036 Chromosome and associated proteins [BR:
oau03036
]
116335892
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oau03037
]
116335892
Enzymes [BR:
oau01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
116335892
Ubiquitin system [BR:
oau04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116335892
UBL E3 ligases
116335892
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
116335892
Cilium and associated proteins [BR:
oau03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116335892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_2
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
zf-ANAPC11
Baculo_IE-1
Motif
Other DBs
NCBI-GeneID:
116335892
NCBI-ProteinID:
XP_031615534
Ensembl:
ENSOABG00000005090
LinkDB
All DBs
Position
LG3:complement(58140694..58155130)
Genome browser
AA seq
1574 aa
AA seq
DB search
MPLKARSSTRRRRKNPDEEQPAEPAASSARVMAPTRMKLRVRRRDNAATGAAGRGAALAV
PAEDEEQRSRESGSRRKNASRSSTAATSSSSLSPPASSASTSARPHLMAAEEASPDSKCP
ICLDRFNNLAFLDRCKHRFCFPCIQEWSHKKPECPLCKQPFASIFYRNQAEDDFKEYTLR
SAPPSSSVAATVAMVAAMASAARSSHQMRLMLRRHRVSEAGETTTRRRRRERGARRAEER
AGGWEWYLDSPPLPLPPLPHPPVVAEDSEDGEEQRIRGGADLAERGVIFEGLTGLGGAVA
PVAPNDRASRRLMTRLAARQRLQREGGTVRRLRERETVAFRRGLYRCGIRVRGVAGVHGN
EGQRDITADSFRRNPAHLNRLRPWLRRELTVLYGSHTSLVDIVQRIIMARLARHGLENTP
NIEEELRPFLLARTEHFLHELISFARSSLSLENYDLQAVYEPPDAAVELDGMSSSSDGSS
VIAISEGEDEERAAGGGSEERLGREVGAQDDPIQTASVLSLSGWDDETPGPSYSTAEPSS
SFSPALPEAANQDGGERQEEEDECLIVGYKKPIAERTPELVQLSSDTEEEEVEKKKEEEA
PPPPSATPPLSYLPTIPPSTSGTYREEQDKGQKIGEAAGQRSRARSWSGSSGRSRSSVCT
LSPATPGETERRQEMGSWRDRKSTSEAAREKRRKRRRERSSNRHRKSGTLFNPNRSIYPA
MMQHRSSPPFDSSADSSSPPSPSPPDSSWEYPCAQVSPLTSSASSPSLSSSSPRPPPPPP
RTPPTPTLSPSGSAHHGEKPGGKRKCKSRHLDNNVKDPTWRPSGSGGSRKEKRKERRKRR
ERDRGRRRERHRRASSGYGGESSRRSRQDRSPSVEIIYEGTITADGAQPPAHKRRRKRHR
KAQQSSSPVIITLDSDSTHDDANNKNSGSISSSPLSSQQTVDFSDLPPLPLVHSASVSGV
LDAEIGELPVDILDRAYDGSDTEPVGRSKAARLIAIDNSDHEVDVENLDVDVEGPIKATD
LKTPDADSHRNMGTVSVGSRPMGEQDAARVMTDLLHKRRTEASTSDSHLLASILSDLDRI
AAPKREAALDIDASCSSDSKKRRDRDLCGVSQAHQQQDSWKSTFPEEPPVQNQDATSINS
PSPLKQWKEGRDAPPLLRQASPVQSYNRNTPPPLKHKDAGSPRRSPIFNKDLHSDHTSAE
PILHSLNPIDSHLPVKLPDDSESIPPISTLKRHLTSTLALSSEPANTSSVSAALSKVRAL
TTDFDHSGHKPPVAPSSSSFVSESTPVASRYYSLNSSALHSTRESTMGISSNLSPVDLNP
VNSLSDIDFHSAAGWSKEKPAPAHSTSAGCRNKTHNFWASPVDFHRFSSAAGGPLAGSGM
YSGVSSHDTSLPVSVSDSRTQNDISPPNSPFSSNLTLIGSTTAAPPSTVNLHPVDFHSSS
PASGGRTGEETLSVVNCEGKPLSVGLVPPANLHSSCLINRNLNHTAFSSSSTPSKHSITF
NASHRKSELGMDPNLFRPPNHVDPDSKHNLPPDSKPPPPKYAQRNFEPHTDNHIISEYNS
TSTTDTHPYERSAT
NT seq
4725 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgaaagcgcgaagctcgacccggaggaggagaaagaatccggatgaggagcaa
cccgcggagcctgctgcttcctcagctcgggtgatggcgccgacgcgaatgaagctgcgc
gttcgccgccgtgacaatgcagccacaggtgctgctggacgcggcgctgcactggcagta
cctgcggaagatgaagagcagaggagtcgagagagtggcagcaggaggaaaaacgctagc
agatcttctactgcggccacatcctcctcgtccttgtctccacccgcgtcctctgcctca
acgtcagcacgcccgcatctgatggcagcagaggaggcgtcgcccgactcaaagtgcccc
atctgcctggaccgtttcaacaacttggcgttcctggaccgttgcaagcaccgcttctgc
ttcccgtgcatccaggaatggtctcacaaaaagccagagtgtccactttgcaagcagccc
tttgcctcaatcttttaccggaaccaagctgaggatgacttcaaggaatatacgctgcgc
tcagcaccccccagcagcagcgtggccgctactgtggcaatggtagcagcgatggcgtcg
gctgcgagaagcagccatcaaatgaggctaatgctgaggcggcaccgggtgtcagaggct
ggcgagacaacaacaaggaggcggcggagggagaggggggccagaagggcggaggagagg
gcagggggttgggagtggtacctcgattcccctcctcttccactccctcctcttcctcac
cctccagtcgtcgctgaggacagtgaggatggggaggaacagaggataagaggaggcgct
gatttggcggagcgcggtgtgatatttgaaggactaacaggccttggaggggcagtggca
cccgttgctcccaatgaccgggcatcacggcgactgatgactcgcctagcggcgaggcag
cgtttgcagcgtgaaggtggaaccgtgcggcgacttagggagagagagacggtggctttt
cgccggggactctatcgctgtggtattcgggtccgtggggttgccggagtacacggcaac
gagggacagcgtgacatcacggcagatagcttccgtcggaaccctgcccacttgaacagg
ctccgcccctggctgcgaagggagctcacggtgctgtatggctcgcacacctcgttggtt
gacatcgttcagcgcatcatcatggcaaggcttgctcgccacggcctggagaatacaccc
aacatagaagaagagctgcggccattcttgctggcgcgcactgagcacttcctgcatgag
ctcatcagcttcgcccgctcgtcgctcagcctggagaactacgacctgcaggcagtgtac
gagccaccggatgccgcagtggaactggatgggatgagcagctcgtccgatggcagctcc
gtcatcgccatctccgagggggaggatgaagagagggcagcagggggagggtccgaggag
aggctggggagggaggtgggagctcaagatgaccccatccaaacagcgagtgtccttagc
ctttcaggttgggacgatgaaaccccaggcccctcctactccactgctgagccttcatct
tcgttcagtcctgccctgccagaggcagccaatcaggatggaggagaaaggcaggaggaa
gaggacgagtgtctcatcgttgggtacaagaagccgattgcagaacggacgccggagttg
gtgcagctctcctctgacacagaagaagaggaggtagagaagaagaaagaggaggaggct
cctcctcccccctctgcaacacctcccctctcttacctacccaccattcctccctccaca
tcaggtacttacagagaggagcaggacaaggggcagaaaattggcgaggcggcaggacag
cgctcacgtgcacgctcatggtcagggagctctggtcggagcaggagctctgtgtgcacg
ctcagcccagcgacacctggagagactgagcggcggcaggagatggggagctggagagac
aggaagtccaccagtgaggcagcaagagagaagaggaggaagagaaggcgagagcgcagc
agcaaccggcacaggaagagtggcactctgttcaaccccaatcggtccatttatcctgcc
atgatgcagcaccgctcctcgcctccgtttgactccagcgctgactccagctctcctccg
tcgcccagcccgccggactccagctgggagtacccctgcgcccaggtgtcccctctcacc
tcctctgcctcttcaccatccctctcctcgtcctcaccacgtcctcccccgccaccaccg
cgaacgccaccgacgcccacgctgtcccccagcggcagcgctcatcacggagagaaaccc
ggtgggaaaaggaaatgcaagagccgccacctggacaacaatgtcaaggatcccacgtgg
aggccaagcggcagtggcggcagtcgcaaggagaagaggaaagagaggaggaagaggagg
gagcgagatagaggaaggagaagggagaggcacaggcgggcgagcagtggctacggtggc
gagagcagccggaggtccagacaagaccgcagccccagcgtggagatcatctacgagggc
accatcaccgccgacggggcgcagcctcctgcccacaaacggcgccggaaacgtcatcgc
aaggctcagcagagcagctctccggtcatcatcaccctggacagtgacagcacccacgac
gacgccaacaacaaaaatagcggcagcatcagcagcagcccgctcagcagccagcagacc
gtcgacttctcagaccttcctccgcttccattggtgcattcggccagcgtgagtggcgtt
ttggacgctgaaatcggagagcttcctgttgacattctagaccgagcatatgatgggtcg
gacacagagccagtgggccgttccaaggcagctagactgatcgccattgacaacagcgat
catgaggtggacgtggagaacctggacgttgacgtagaaggaccaatcaaagcgactgat
ctaaagacaccagacgccgacagtcacagaaacatgggcactgtgagcgtgggctcgcga
ccaatgggagagcaggatgctgcccgcgtaatgacggatcttcttcataaaagacgtact
gaagcttcaacctctgacagccacctcttggcctccatcctaagtgacctggacaggatt
gctgcacctaaacgtgaagctgctttggacattgacgcaagctgctcctcagactccaaa
aaaaggcgcgaccgagatctgtgtggcgttagtcaggctcatcaacagcaggacagttgg
aaatccactttccctgaggagccgccggtccagaatcaggacgctacctccataaactcg
ccatctccactcaagcaatggaaggaggggagggatgcccctccgctcctcagacaggcc
agcccggttcagtcatacaacaggaacacgccgccaccactaaaacacaaagatgctggg
agtccacgccgctctcctatctttaacaaagacctccactcagatcacacctctgctgaa
ccaattctgcatagtttgaatcccatcgactcccatttgcccgtgaagctgcccgatgac
agtgagtccatcccgcccatttctacactgaagagacatctgaccagcacgttggcactg
agcagcgagccggccaacacgagcagcgtttcagctgctctctctaaagtccgagcactg
acaactgactttgatcactccggtcacaaacctcctgttgctccctcttcctcttctttt
gtgtctgaatcgactcccgtggcttctcgttattactccttaaactcctcagctttacat
tccaccagggagagcacgatgggaatatcttccaacctctcacccgtcgacttaaatcct
gtgaattctttatcggacattgatttccactcagctgctggctggtccaaagagaagcca
gctcctgctcactctacctccgctggctgcaggaataagactcacaacttctgggcatca
cccgttgatttccatcgattcagcagtgctgctggagggcccctggcaggtagcggcatg
tactcaggagtcagctctcacgacacatcacttcctgtttctgttagtgattccaggact
cagaatgacatctcaccccctaactcccccttttccagtaatctgactctaattggctcg
acaacggctgcccctccgtccaccgtgaatctgcatcctgttgacttccactcctccagt
ccggcctcaggaggacggacaggcgaggagacgttgtcggtggtcaactgcgagggaaag
ccactctctgtgggtcttgttccacctgctaacttgcattcgtcttgtttgattaacaga
aacttgaaccacacagccttctcctcctcctctactccctctaaacacagcattaccttc
aacgcctcgcacagaaagtccgaactcggcatggacccaaatctcttccggccccccaac
catgttgatcctgattcaaaacataacctcccccctgactctaagcctccaccaccaaaa
tacgctcagaggaactttgagccccacacggacaatcacatcatctcggagtataactcc
acttccaccactgacacccacccatacgaacgctccgccacgtag
DBGET
integrated database retrieval system
