Oreochromis aureus (blue tilapia): 116335958
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Entry
116335958 CDS
T07295
Symbol
si:dkey-37o8.1
Name
(RefSeq) elongation factor 1-alpha
KO
K03231
elongation factor 1-alpha
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116335958 (si:dkey-37o8.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116335958 (si:dkey-37o8.1)
03016 Transfer RNA biogenesis [BR:
oau03016
]
116335958 (si:dkey-37o8.1)
03012 Translation factors [BR:
oau03012
]
116335958 (si:dkey-37o8.1)
04131 Membrane trafficking [BR:
oau04131
]
116335958 (si:dkey-37o8.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oau04147
]
116335958 (si:dkey-37o8.1)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116335958 (si:dkey-37o8.1)
Transfer RNA biogenesis [BR:
oau03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116335958 (si:dkey-37o8.1)
Translation factors [BR:
oau03012
]
Eukaryotic type
Elongation factors
116335958 (si:dkey-37o8.1)
Membrane trafficking [BR:
oau04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116335958 (si:dkey-37o8.1)
Exosome [BR:
oau04147
]
Exosomal proteins
Proteins found in most exosomes
116335958 (si:dkey-37o8.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
116335958
NCBI-ProteinID:
XP_031615605
Ensembl:
ENSOABG00000018696
LinkDB
All DBs
Position
LG9:22275886..22278460
Genome browser
AA seq
456 aa
AA seq
DB search
MGREKTHVNVVIIGHVDSGKSTTTGHLVYKCGGIDQRRLEKFEKAANEMGKSSFKFAWVL
DKLKAERERGITIDITLLKFNTQKYIMTVIDAPGHRDFIKNMITGTSQADVALLVVSAAK
GEYEAGVSRSGQTREHALLAYTLGVKQIIVCVNKMDLTEPPYSQSRFEEVMRGVSGFLRK
IGYDTTAVPFVPVSGWTGENMITASQRMPWFQGWKVRRREGNKSGRTLLEVLDSIQPPVR
TVNKPLRLPLQDVYKIGGVGTVPVGKIETGVLKPGMMLTFSPAKLTAEVKSIEMHHQGLE
TALPGHNVGFNIKNVSVKNLRRGDVAGNAQQDPPSDVKSFDAQVIILNHPGKIKAGYSPV
LDCHTAHVTCRFAELKEKLDRRTGKKLEDNPQIVMSGDAATVKLVPIKPMCVESFFTYPP
LGRFAARDLKQTVAVGVIKSVEKNHGSKPHKAQVCK
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgggaagagagaagactcacgttaacgtggtgatcatcggccatgttgacagtgggaaa
tccaccaccaccggacacctggtctacaagtgtggaggaattgatcaaaggaggctggag
aaatttgagaaggctgcgaatgaaatggggaagagctcctttaagtttgcctgggtgctg
gacaagctgaaagctgagcgggagcgaggaatcaccattgatatcacgctgctgaagttc
aacacccagaaatacatcatgactgtaattgacgctccaggccaccgtgacttcatcaaa
aacatgataactgggacgtcacaggctgacgttgccctcctggtggtctccgcagccaaa
ggcgagtacgaggccggcgtgtctcggagtggtcagaccagagagcatgccttgctggct
tatactctaggtgtgaagcaaatcatagtctgtgtaaacaagatggacctgactgagcca
ccttacagccagagccgcttcgaggaagtgatgcgaggggtgagcggcttcctcaggaag
attggctacgacaccacggctgtgcccttcgttccggtttcgggctggactggggagaac
atgatcaccgcatctcaaaggatgccgtggtttcaaggctggaaggtgagacgaagggaa
gggaataaaagtgggaggacgctgcttgaagtcctggactcaattcaaccacctgtgcgc
acagtcaacaagccactacgattacctctgcaggatgtctacaaaattggaggagttggg
acggtgccagtgggtaaaattgaaactggtgtcctgaagcctggcatgatgctgacgttc
tcccctgccaagctcactgcagaggtcaagtctatcgagatgcaccaccaggggctggag
acggctctgccaggccacaatgttggctttaacatcaagaacgtgtccgtgaagaacctg
cggcgtggggacgtggctgggaacgctcagcaggatcctccttcagatgttaaaagcttt
gatgctcaggtgataatcctgaaccacccagggaagatcaaagcaggctactccccagtt
ctggactgccacacagcccacgtcacctgccgcttcgccgagctgaaggagaagcttgac
cgccgcacgggcaagaagctggaggacaacccgcagatcgtcatgtctggagatgcagcc
acagtcaaactggtccccatcaagcccatgtgtgtggagagcttcttcacataccctcct
ttaggtcgcttcgcggcgagagacctgaagcagacggtcgctgtaggagtcatcaagtca
gtggagaagaaccacggctcaaaacctcacaaagctcaagtttgtaaataa
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