Oreochromis aureus (blue tilapia): 116335961
Help
Entry
116335961 CDS
T07295
Symbol
smarcd3b
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3b isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116335961 (smarcd3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116335961 (smarcd3b)
03036 Chromosome and associated proteins [BR:
oau03036
]
116335961 (smarcd3b)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
116335961 (smarcd3b)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
116335961 (smarcd3b)
PBAF complex
116335961 (smarcd3b)
GBAF(ncBAF) complex
116335961 (smarcd3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
TFIIA
SWIB_eIF2D
Motif
Other DBs
NCBI-GeneID:
116335961
NCBI-ProteinID:
XP_031615609
Ensembl:
ENSOABG00000015983
UniProt:
A0A668UEI4
LinkDB
All DBs
Position
LG9
Genome browser
AA seq
518 aa
AA seq
DB search
MAMEETAGGARKATKSKLFEFLVHGVRPGMPSGARMPHQGAPMGPPGPPYGGSPAVRPGL
PSPVMEPSRKRPAPSQQVQQQQQQQQQQQQQQQAVQNRARKKPVGFPGANEMPARQMDMR
EPQSDPTLGSNAKRRKMADKILPQRIRELVPESQAYMDLLAFERKLDQTIMRKRVDIQEA
LKRPMKQQKRKLRLYISNTFNPARPDADDSDGSIASWELRVEGKLLDDPGKQKKKFSSFF
KSLVIELDKDLYGPDNHLVEWHRTPTTQETDGFQVKRPGDVSVRCTLLLMLEYQPPQFKL
DPRLARLLGIHTQTRSCIIQALWQYVKTNKLQDSHDKEYINCDKYFQQIFDCPRLKFSEI
PQRLTNLLLPPDPIVINHVISVDPNDQKKTACYDIDVEVDDPLKSQMSSFLLSTANQQEI
ASLDNKIHETIESINQLKIQRDFMLSFSRDPKGYIQDWLKSQSRDFKLMTDVVGNPEEER
RAAFYHEPWSQEAVSRYFYCKIQQRRQELEQALAVRNT
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggctatggaggagacggcggggggagccaggaaagccaccaagagcaaactgtttgag
ttcctggtccatggagtgcgtcccggcatgccgtctggagcgaggatgccccaccaggga
gctcccatgggcccccccggcccgccgtacggagggagcccggcggtgcggcccggcctg
ccctccccggtgatggaacccagccgtaagaggcctgccccctcccagcaggtccagcag
cagcagcagcagcagcaacagcagcagcagcagcagcaggccgtccagaaccgtgccaga
aagaagccagtcggattccccggagccaatgagatgccggcgaggcagatggacatgaga
gagccccaatcagatcccacgctcggatcaaatgctaagagaaggaaaatggcagacaag
attcttccgcaaaggatccgtgagctggtccctgagtctcaggcctacatggacctgctt
gcatttgagcgcaagctggaccagaccatcatgcgcaaacgcgtggacatccaggaggcc
ctgaagaggccaatgaagcagcagaagcgtaaactgaggctttacatttccaacaccttc
aaccctgccagacctgacgcagatgactctgatggcagcattgcgtcatgggaactgcga
gtagaagggaagttgctggatgatccggggaagcagaagaagaaattctcttcgtttttc
aagagcctggtgatcgagctggataaagacctgtacggtcccgacaaccacctggtcgag
tggcaccgcacgcccaccacccaggagacggacggcttccaggtgaagcggccaggagac
gtgagcgtgcgctgcactctgctgctgatgctggaataccagcctccccagtttaagctg
gaccctcgcctggctcgcctgctcggtattcacactcagactcgctcctgcatcatccag
gccctctggcagtacgtgaagaccaacaagctgcaggactcgcatgacaaggagtacatc
aactgtgacaagtatttccaacagattttcgactgccctcggctgaagttctctgagatc
cctcagcgcctcaccaacctcctcctgccccctgaccccatcgtcatcaaccatgttatc
agcgtggatcccaacgaccagaagaagacggcctgctacgacattgacgtggaggtggac
gaccccctgaagagccagatgagcagcttcctcctctccaccgccaaccagcaggaaatt
gcctcactcgacaacaagatccatgagaccatcgagtccatcaaccagctgaagatccag
agggacttcatgctgagtttctccagagatcccaagggctacatccaggactggctcaaa
tcccagagccgagactttaagttaatgacagacgtggtggggaaccctgaagaggagcgg
agggcggcgttctaccacgaaccctggtcccaggaggccgtcagccgctatttctactgc
aagatccagcagaggagacaggagctggaacaggccttagcggtccgcaacacctaa
DBGET
integrated database retrieval system
