KEGG   Oreochromis aureus (blue tilapia): 116336006
Entry
116336006         CDS       T07295                                 
Name
(RefSeq) WD repeat-containing protein 82-like
  KO
K14962  COMPASS component SWD2
Organism
oau  Oreochromis aureus (blue tilapia)
Pathway
oau03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:oau00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    116336006
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oau03019]
    116336006
   03036 Chromosome and associated proteins [BR:oau03036]
    116336006
Messenger RNA biogenesis [BR:oau03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     116336006
Chromosome and associated proteins [BR:oau03036]
 Eukaryotic type
  Histone modification proteins
   HMT complexes
    COMPASS/SET1 complex
     116336006
    COMPASS/SET1 complex (yeast)
     116336006
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_SPT8 Beta-prop_RIG_2nd Beta-prop_IFT122_1st NBCH_WD40 WD40_RFWD3 Beta-prop_EIPR1 Beta-prop_Vps41 Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_NWD2_C Beta-prop_NUP159_NUP214 Beta-prop_HPS5 VPS8_N Beta-prop_SCAP PSCyt3
Other DBs
NCBI-GeneID: 116336006
NCBI-ProteinID: XP_031615663
Ensembl: ENSOABG00000021279
UniProt: A0A668V6D5
LinkDB
Position
LG5:complement(20150790..20154202)
AA seq 315 aa
MKITDGVLRSFRVARTHRKNEEKVNCVDYSPNGENVITSSDDDRILLYDMRDGKCKSNLF
SKKYGVDLIRYTHGDTNTVVYSSNKLDDTIRYLSLTDNKYIRYFPGHTKRVTALSMSPVD
NTFISGSLDKTIRIWDLHCQNCQGVINPLGTPLCSFDPDGLIFAAGVDSKTVKLYDFRAF
DKGPFACFETRFNRVCDWTGLKFSSDGKQILISTNKGIIGVLNAFNGSVLHTFSGYNNSK
GISLEACFTPDSQFVMIGSEDGRVHVWSTESGMKVAVLDGKHPGPISALQFNPRFMTFVS
ACSNTTFWLPCLDDF
NT seq 948 nt   +upstreamnt  +downstreamnt
atgaagatcacagacggtgtgttacgaagtttcagggtggccaggactcatcggaaaaac
gaagagaaggtcaactgcgtggactacagcccaaatggtgaaaatgtgataacaagcagc
gacgatgatcgcatactgctgtatgacatgcgagatggaaagtgcaaaagcaaccttttc
agcaaaaagtatggagtagacctcatccgctacacgcatggagacacaaatacagtggtc
tacagctccaacaaactggatgataccatcagatacctttcgctcactgacaacaagtac
atccgatatttcccaggtcacactaagagggttactgctctctccatgtctccggtggat
aacacatttatctctgggtcgttggacaagactatccggatctgggacctccactgtcaa
aactgtcaaggtgtgataaatccactggggacacctctgtgttcgtttgaccctgatggg
ctgatatttgctgcaggagtggattcaaagacggttaaactgtacgactttcgtgctttt
gacaagggcccgtttgcctgttttgaaacgaggtttaatcgcgtttgtgactggactgga
ctcaaattcagtagtgatgggaagcagatcctcatatctacaaataaagggattattgga
gtcttgaatgctttcaatggatctgtgctgcacactttttccggctacaacaacagtaaa
ggcatctcactggaggcctgcttcacacctgactcgcagtttgtcatgattggttcagaa
gacgggagagttcatgtttggagcacagagagtggaatgaaagtggccgtgctggatggg
aagcatccaggacccatcagtgcgctccagttcaaccccagattcatgacgtttgttagt
gcctgctctaacacgactttttggctcccgtgtcttgatgacttttaa

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