Oreochromis aureus (blue tilapia): 116336199
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Entry
116336199 CDS
T07295
Symbol
nfrkb
Name
(RefSeq) nuclear factor related to kappa-B-binding protein isoform X1
KO
K11671
nuclear factor related to kappa-B-binding protein
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
116336199 (nfrkb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
oau03036
]
116336199 (nfrkb)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
116336199 (nfrkb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NFRKB_winged
ASXH
Motif
Other DBs
NCBI-GeneID:
116336199
NCBI-ProteinID:
XP_031615862
Ensembl:
ENSOABG00000014591
LinkDB
All DBs
Position
LG10:14294954..14303959
Genome browser
AA seq
1274 aa
AA seq
DB search
MDALAHMLSDPLDPKEENDEQITEECMLGNCRVSLPEDLLEDPEIFFSVLSESTWREVLS
DSQRQHLRQFLPQFPENNSVEQGSTISDLFNDKNFNFGNPLHLAQKLFRDGYFNPEVVKY
RQLCAKSQRKRQVHCLQQYYHRLLKQILVSRKELLDFAVQNGQDFPHKRRLPTKTHAEMR
EARVRRRLSRIMKEVKTECGDSNASSDDDDISPWTPAPQSPSSPTPTVSIRVLPSLSTQD
MKSTEKIELGEQDLKVMLQNHREKRKRQPDHPDLITSDIHLGDILSRANMGRKGTMPLFD
LSLPKKKIRDERRKKKMRTIKVESEDTCDTIAPPDTPSAPPANIINSMPDTPSTPLTNIK
EEVVEECLSSPVPVEEIVASFFSLLENILRTEGPASTSVLEEKVQIWQSSPASPINAWFS
SASCWSDLVVQALQFLAGETKDGMMALPSGFSPFVEFSDECQQWKWIGPTQDTEKDLSAL
CQLWLDSKDFIVKTENEETLEMTSPTPRLSTDYVVRPSTGDERQVFQVQEQQRYNQPHKA
FTFRMHGFESVVGPVKGVFDKEMSLNKAREHTLLRSDRPPYVTILSLVRDAAARLPNGEG
TRAEICELLKDSQFLAPDVTSAQVNTVVSGALDRLHYEKDPCVKYDIGRKLWIYLHRNRS
QEEFERIHQAQAAAAKARKALQQKPKPAAKPKSGSKDGSNKTGFLEAGQDISSNPMSPIP
TTPTPNTPGTPKSPLPSTATTPTKTGVPDTIKTSPGVLLVSPPSLPQLGTILPTSQACPP
ASQPVTSHAARLVSHLAAGSLPQVRVVPAQPGLGSSAGSQQATLVHQTPHQIRMPVSVAA
KGISQQAVVSVPLRSQPASSPIQVPTTLSVSAVTVAKPQSGSPGSPANNPASPAVLQGVT
SPNIKQVSITGQLGVKSPGAGIPITATNLRIQGKDVLRLPPSSITTDAKGQTVLRITPDM
MATLAKSPVTTVKLTSDFLGSASTGGKSISATLHVTPPHPSPSSVSSAASCTGEVQTTKA
GHVASTLLKAAGDTTIRLMPTLAVTVADQKSRTFSTVTSPDKAGATIRIMPGLGVIPQKP
GQTITMTTTTGSKPLTATTCANVVTMPASVVAGAKGITVASGASGSALTLGTATAVRQVP
TTVVTTQTGKLPTRITVPLSVLNQPLKSKSVVTTPIGKTSLNTNISSLGRNIILTTMPAG
TKLIAGNKPVSFVTAQQFQQLQQQGQATQVRIQTVPAQQVQHMAAGSPKSVSTVVVTTAP
SPKCTPDTPPAPQQ
NT seq
3825 nt
NT seq
+upstream
nt +downstream
nt
atggacgcacttgcacacatgctttcggaccctcttgatccaaaagaagagaacgatgag
caaatcaccgaggagtgcatgctggggaactgcagagtgagccttccagaggacctcctg
gaggaccctgaaattttcttctctgtgctgagtgaaagcacctggcgtgaagtactgtca
gattcacagcggcagcaccttcgtcagtttctgccgcagtttcctgagaacaatagtgtg
gagcagggcagtaccatcagtgacctattcaacgataaaaattttaactttgggaacccc
cttcatcttgcacaaaaactattcagagatggttacttcaatcctgaggtggtcaagtac
agacaactgtgtgccaagtcccagaggaaacgacaggtgcactgccttcagcagtattac
cacaggctgctgaagcagatcctcgtctccagaaaggagctgctggactttgcagtacaa
aatggtcaggactttccacataaaagaaggttaccaaccaaaacccatgctgaaatgcgg
gaggcaagggtgagaagaagattgagccgcataatgaaggaggtcaaaactgagtgtggg
gacagcaatgcttcatctgatgatgatgatatatcaccatggactccggcacctcagtca
ccctcttctccaacacccacagtttcaatcagagtactaccaagcctctccacccaagac
atgaagagtactgaaaaaatagaacttggtgagcaggacttgaaagtcatgctgcagaat
catcgtgagaagaggaagcgacaaccggaccatccagacttgataacctctgatatccac
cttggagacatactttcaagagcaaacatgggtcgtaaagggactatgccactcttcgat
ctgtctttgcctaagaagaagatcagagatgagagaaggaagaagaaaatgaggacgata
aaagttgaatcggaggacacctgtgacactattgcacctccagacaccccatcagctcca
ccagcaaacataatcaactccatgccagatacaccgtctaccccgctaaccaacattaag
gaggaagttgtggaggagtgtctaagcagtcccgttccagttgaggaaatagtcgccagt
tttttcagcttgctggaaaacatcttgaggacagaaggtcctgccagtacttcagtgttg
gaggagaaagttcaaatatggcagtcatctccagcaagtcccattaatgcatggttttct
tcagcctcgtgctggtctgacttggttgttcaagccctgcagtttcttgcaggagagact
aaagatggcatgatggcactgcccagtggcttttctccatttgtggaattttctgatgaa
tgtcaacagtggaagtggatcggtcccactcaggatacagagaaggatttgagtgcactc
tgtcagttgtggttagactccaaagatttcattgtcaagacagaaaatgaagaaacatta
gagatgacctctcccacaccgagactttcaactgattatgtcgtgcgtcccagcactgga
gatgagagacaagtgtttcaagtccaggagcagcaacggtacaaccagccacataaggct
ttcacgtttaggatgcacggctttgaatctgtggtgggtccagttaaaggcgtgttcgat
aaggagatgtcactaaacaaagccagggagcacacgctgctgcgctcagaccgaccacca
tacgtcaccattctttctcttgtacgggatgcagcagccagattacccaatggggaagga
acgagggcagagatctgtgaactgctgaaagactcacagtttcttgctccagatgtcaca
agtgcacaggtgaatactgttgtcagtggggctctggatagacttcactatgagaaagac
ccctgtgtgaagtatgacattggccgcaaactgtggatttacctgcaccgcaatcgcagc
caggaagagtttgagaggatccaccaggctcaagctgcagctgctaaagccagaaaagct
ctacagcaaaaaccgaaaccagcagctaaacctaagtctggaagcaaagatggaagcaac
aaaactggatttttggaagcaggacaggatataagttctaatcccatgtcaccaatccca
acgacacccactccgaacacacctggaacccccaaatcacccttaccctccacagccacc
acaccaacaaaaaccggagtcccagatacaatcaaaaccagcccaggtgttcttcttgtg
tcccctccatcgttgccccagctgggaaccattttgcccacaagtcaggcttgtccacca
gcttcacagccagttacatcccacgcagctcgtttagtgagtcacctggcggcaggttct
ctcccacaagtacgagtcgttcctgctcagcctggccttgggtcatcggcaggaagtcag
caagccacactggtgcatcagacccctcaccagatccggatgccagtgtcagtggcagct
aaaggaatttcacagcaggctgtggtgtctgtgcctttaagaagtcaacctgctagcagt
ccaatccaagttccaaccacattgtctgtgtcagctgtgactgtggccaaacctcagtct
ggatcacctggtagcccagctaacaaccctgcttctccagctgtgctgcaaggagtcacc
agcccgaacatcaaacaggtgtctatcacaggacaactgggagtaaagtctccaggagca
ggaattcctatcacagctacaaaccttcgcatccagggaaaagatgtcctacgccttcca
ccatcatccataaccacagatgctaaaggccaaacagtgctgcggatcaccccagacatg
atggctacacttgccaaatccccagttacgactgtcaagctcacttctgactttctgggc
tctgcctccacaggcggcaagagcatatcagccactcttcacgtgacaccaccccaccct
tcaccttcttcggtgtccagtgctgcatcctgtactggggaagtacagaccactaaagca
ggacacgttgcctcgaccttgttaaaggctgcaggagacacaaccattcgtttgatgccc
acgttggccgtaactgtggccgaccaaaaatctaggactttctccactgtgacctcccca
gacaaggccggcgccactattcggataatgccgggcctgggtgtaattccacagaaacca
ggtcagaccatcacaatgaccaccaccactggcagtaaacctctcacagcaactacatgt
gctaacgtagtgaccatgcctgccagtgttgtggccggtgctaaagggatcacagtggct
tctggagcttcggggtcagctctgacgctaggaacagctacagctgtgcgacaggtccct
actacagttgtcaccacacaaacggggaagttacccacacggatcacagtccccctgtct
gtcctcaatcagccactgaagagcaagagtgttgtgacgacacccattgggaaaacaagc
ctgaacacaaatattagcagcctgggcagaaacatcattctcaccaccatgcctgctggc
acgaagctgattgcaggaaacaaacctgtcagttttgtcacagcgcaacagttccaacag
cttcagcagcaaggacaggccacacaggttcggatccagacagttccagcgcagcaggtt
cagcacatggctgcaggctccccgaaatctgtttcaacagtcgtagtcacaacagcacct
tcaccaaaatgtacacctgatactccaccggctccacaacagtga
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