Oreochromis aureus (blue tilapia): 116336242
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Entry
116336242 CDS
T07295
Symbol
taf6
Name
(RefSeq) transcription initiation factor TFIID subunit 6
KO
K03131
transcription initiation factor TFIID subunit 6
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116336242 (taf6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oau03021
]
116336242 (taf6)
03036 Chromosome and associated proteins [BR:
oau03036
]
116336242 (taf6)
Transcription machinery [BR:
oau03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
116336242 (taf6)
Coactivators
SAGA/TFTC/STAGA complex
116336242 (taf6)
Chromosome and associated proteins [BR:
oau03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
116336242 (taf6)
STAGA complex
116336242 (taf6)
TFTC complex
116336242 (taf6)
SAGA complex
116336242 (taf6)
SLIK complex
116336242 (taf6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF6_C
TAF
Histone
TFIID-31kDa
CENP-S
CBFD_NFYB_HMF
Bromo_TP
Motif
Other DBs
NCBI-GeneID:
116336242
NCBI-ProteinID:
XP_031615935
Ensembl:
ENSOABG00000016429
LinkDB
All DBs
Position
LG10:complement(12688457..12696918)
Genome browser
AA seq
638 aa
AA seq
DB search
MAEERRQKHCSVVLPTESMKAMAESVGVGQLQEDSCVALSEEVSYRIKEIAQDALKFMHH
GKRRKLTTSDIDNALKLKNVEPLYGFQSQEFIPFRFASGGGRELHFYEEKEVDLSDIINT
PLPRVPLDVSLKAHWLSIEGMQPAIPENPPPATKEQQKAESTEPLKVVKPGQEEEGTIQG
KSQGTTTPDGKGKEKGLIRLKPRSTHELSVEQQLYYKEITEACVGSCEAKRAEALQSIAT
DPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMVKALMDNPTLYLEKYLHELIPAV
VTCIVSKQLCLRPDVDNHWALRDFAARLMAQSCKTFSTTTNNIQSRITKTFTKSWLDDKT
QWTTRYGCIAGLAELGSDVIKTLIIPRLAVEGARIKAVMEGPVVSNIDKIGAEHVQSLLL
KHCASVIAKLRPQPDNVDQYRTDYGYLGPMLCSHVMKARTQAALQAQQVNRTTLTITQPR
PTLSVSQSGLSGSSGPRTPSIIKVPSSLTLMSPRPGTPSQPSPPATKYIVMATSAGAAST
QQVITLSSSQSASPVTSTVPSATSTLQPLVKLESGSGAGLTASRPLQKYIVVSLPSSASS
SLETKSSVLPTSISSSSLDGGMKLERSESPGASTQSPH
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaacgtcggcagaagcactgttcggtcgtcctgcctacagagtcaatgaag
gccatggcagagtctgtgggagtggggcagttacaggaggacagctgtgtagccctaagt
gaagaggtcagctacagaataaaagaaattgcacaggatgctttgaaatttatgcaccat
gggaagagacgtaaactaactaccagcgatatagacaatgctctcaaattaaaaaatgtg
gaacccctgtatggcttccagtcgcaagagtttatcccttttcgttttgcgagtggcggt
ggaagagagcttcatttctacgaggaaaaggaagttgacctcagtgacattataaacaca
cctcttcccagagtcccactagatgtgtctcttaaagctcactggttaagtattgagggg
atgcaaccagctattccagaaaatccaccaccagcaacaaaagagcaacagaaagctgaa
tctacagagcctctcaaagtagtcaaacctggtcaggaggaggaaggtacaattcaaggc
aagagtcagggaacaacaactcctgacggtaaaggaaaggaaaagggtctaataaggttg
aaaccacgcagcactcatgagctttctgttgaacagcagctctactacaaggaaatcaca
gaagcatgtgttggatcctgtgaagctaagagagctgaagccttacagagtattgctact
gatcctggactttatcagatgcttccaagattcagcacatttatttctgaaggcgtgcgt
gtaaacgtggtgcaaaacaacttggctcttctgatttatctgatgcggatggtcaaagct
ctgatggataaccccaccctgtatctggaaaaataccttcatgagctcatcccggctgtg
gtcacctgtattgtgagtaagcagctgtgtttgcgaccggatgttgacaaccactgggct
ttacgggactttgctgctcgtcttatggcccaaagttgtaaaaccttcagtacaacaacc
aacaacattcagtctcgtattaccaagacttttaccaagagttggctggatgataaaaca
cagtggacgacacggtacggctgcatcgctgggcttgcggaactgggatcagatgtgata
aagacattgataattcctcggcttgctgtagagggtgctcgcatcaaagcagtgatggaa
ggaccagtggtctctaatattgataagataggagctgaacatgttcaaagcctcctactg
aaacattgtgccagtgttattgccaagttacgacctcagcctgacaacgtggaccagtat
cgcacagactatggttatctcggacccatgctttgctcccatgtaatgaaggccaggact
caagcagcactgcaagctcagcaagtcaacagaaccacattaacaatcactcagccgcgt
cccaccctttcagtctcgcaaagcgggctaagtgggtcatcaggtcctcgcactcccagc
atcattaaggtcccaagctccctcacactgatgtcgccacgacctggtactccatcacag
ccatctcccccagctactaagtacattgttatggcaaccagtgcaggagccgcatcaact
cagcaggtcataacgctcagctcttcacagtcagcttcaccagtaactagtactgttccc
agtgctacatctaccttgcagcctttggtaaaactggagtctggcagtggcgctggactc
acagcttcacgacctctgcagaagtacatagtcgtgtctctgccctcatctgcctcttca
tctttggagactaagagctctgtgctacccacctcaatttcctcaagttcactagatgga
gggatgaagctggagcggtccgagtctcctggagcaagcacacagtcgccacactga
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integrated database retrieval system
