Oreochromis aureus (blue tilapia): 116336376
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Entry
116336376 CDS
T07295
Symbol
lrrc7
Name
(RefSeq) leucine-rich repeat-containing protein 7
KO
K24055
leucine-rich repeat-containing protein 7
Organism
oau
Oreochromis aureus (blue tilapia)
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116336376 (lrrc7)
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
116336376 (lrrc7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_14
LRR_4
PDZ
LRR_1
LRR_LRWD1
PDZ_6
PDZ_2
LRR_NXF1-5
LRR_5
LRR_At5g56370
LRR_EndoS
LRR_Zer-1
Motif
Other DBs
NCBI-GeneID:
116336376
NCBI-ProteinID:
XP_039457392
LinkDB
All DBs
Position
LG17:complement(32649715..32732207)
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AA seq
1663 aa
AA seq
DB search
MRSSPPSSGFGGTKDAADSAVQCLEMTTKRKLIGRLVPCRCFRGEEEVISVLDYSHCSLQ
QVPKEIFSFERTLEELYLDANQIEELPKQLFNCQALKKLSMPDNDLSNLPTTIASLVNLK
ELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFTQLLNLTQLFLNDAFLEYLPA
NFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLD
NNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGML
KKLTTLKVDDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAADENFLS
ELPREIGNCKNVTVMSLRSNKLEFLPDEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAA
LWLSDNQSKALIPLQTEAHPETKQKVLTNYMFPQQPRHDEDYQSDSDSFNPTLWEEQRQQ
RMTVAFDFEDKKEEEDNSGKVKVEINLKRYPTPYPEDLKNMVKSVQSLVGKSVHAGHGHQ
HQLSTGTATSAGTNMEHTHLSKEPYEPPWPLPPKEVTDREMQDFSQTQLMDQGPMHNSGI
DIPKRKDKEDLTESSEDSMGGSPNDIRISDMRPTLVEPPMYKPKVVLLGKDKKESTDEEV
DKLHCLNHSGSSATYSDYSPSQGSSGSSNPPGNTHSHTLSHGHPHNPALPPPSKDQGPQT
HWTNRLAQSFPKPIDSKPLLSQRETPPSGTLQQRGDRRPLSEPFDWVDAPHYDNTGFDAE
ESPLDPPSSTTSQGNPPLGSKPRSSSAHGRRPLLRQDRIVGVPLELDTQTLPFHGNQRPN
QDNDSSGHPPQNPWQNWTRTPSPLEDRTAFPSKLDLTPTSSPNPDRKDMDSRLQQSTVPL
PGSWTYHDNEGEQNRKDQLSVGGVNKVTVVMSKSSDRLSPMMKETRSKFKKSQSIDEIDI
GSYKVYSIPMDSYSSSIEQQTSLDRPELPGSMEQTNMSRSQSAPMLDEEMGYPGHGSGDQ
NQRQNQKPAIPQKAYHFDHNYNPQVRWSCEPLVTMDRRVPPPFPNTPDYVNHSSKALEYL
NQPGKTLPKELVSPRYRAYPPLEMFSFPQSPINQDGPPSQQQQPIPSQRSRPGFLRRADS
LVSSTELALFRRVHEAQQEALQESQYRQQADPPLYGRAVYSTPMEHSAMSNMADNQSQML
HNKRNGRYDDDYPTYQEQKKPMIGYPTKSLTQRRPLSARSYSTETYGASQARPVSARPTM
AALLEKMPPDYTLATCPEKPPDDTIKVRPVVPQKPEDITSKMPADWRQQLLRHIEAKRLD
RSGVLKHNTLTLGMLCQGGGHGQGRSSTLNFNLYNNTKHEPPAGRWLPLPPPPSANATPS
QQGGVLDNDQEGVSGSNQWAPYSLGRRDVPPDNMLKKSAHSHNPSHQSHNTMIVTSSSSS
SATTPHRVVGQQGYDGMMSKGGQYNQGMQLSVVPSGGPGQYQGNMSQAPGQAYPSGGLPM
ALSQSGNQPQYNPHTSHTSHQPATNPQYHVNQGMGHSNQVVMTTHTNPRPQSARCLLQTK
GQKSTDGFQEQLCVRIEKNPGLGFSISGGISGQGNPFKPSDMGIFVTRVQHDGPAASALQ
PGDKILQANGHSFLHMEHETAVSLLKSFPRTVDLVVLRDSSTC
NT seq
4992 nt
NT seq
+upstream
nt +downstream
nt
atgcgctcatctcctccgtcttctggattcgggggcactaaagatgcggctgatagcgcg
gtgcagtgtctggaaatgaccactaaacggaagctgattggccggctggtgccgtgccgt
tgtttccgtggtgaagaggaagtgatctcagtgttggactactcccactgcagcctgcag
caggtccccaaggaaatcttcagctttgagagaactctggaggagctctacctagatgcc
aaccagattgaggaattacccaagcaactcttcaactgccaggccttgaagaagctgagc
atgccagataacgacctgtccaacctgcccaccaccatcgccagcctggtgaacctaaaa
gagctagacatcagtaaaaacggaatccaggagtttccagacaatataaaatgctgtaaa
ggcttgtctgtggtggaagccagtgtcaaccccatcaccaaactcccagatggttttacg
cagctcctgaatctgacccagctctttttaaacgatgccttcctggagtatctgcctgct
aactttgggagactctccaaactacggatcctggagctgagggagaaccacctgaaaaca
atgccaaagtccatccacagactgacacagctcgagaggctggatctgggtagcaatgaa
ttttctgaagtgccggaggtgttggaacagatccacaatctgaaggagctatggctggat
aataactctctgcagactataccagggtcaatagggaagcttcgtcaattgcggtacttg
gacttggctaagaatcgtatcgagacgttggacgcggacatttcgggctgcgaggccttg
gaagacctgctgctatcctccaacatgctgcagcaccttcctgactctataggaatgtta
aagaagctgacaacactaaaggtagatgacaaccagctgacctcactgcctaacaccatt
gggagtctgtctctactggaggagttggactgtagttgtaatgagttggagtcgctgcct
cccaccatcggctacctgcacagcctgagaaccttcgctgccgatgagaacttcctctca
gagctgccccgcgagatcggtaactgcaagaacgtgaccgtcatgtcactgcgctccaac
aaactggagtttcttcctgatgagatcggacagatgaccaaactgcgagtccttaacctc
agtgacaacaggttaaagaatctaccgtttaccttcactaagctgaaggacctggcagct
ctgtggctctctgacaatcagtccaaggctctgatcccactgcagacagaagcccaccca
gaaaccaaacagaaggttttgaccaactacatgtttccccagcagccgcgacatgatgag
gattatcagtcggacagcgacagctttaatcctacgctgtgggaggagcagcgacaacag
aggatgactgtggccttcgactttgaggacaagaaagaagaggaagacaactctgggaag
gtcaaggtggagataaacctaaagcgctatccaacgccctaccctgaggacctgaagaac
atggttaagtcagtgcaaagtcttgtgggcaaaagcgtacacgccggacacgggcaccag
caccagctgagcacaggcaccgccacctctgcaggaaccaacatggaacatacacacctc
agcaaagagccatatgaaccaccgtggcccctgcctcctaaagaggtgacagacagagag
atgcaggacttctctcagactcagctaatggatcagggaccaatgcataactctggcatc
gatattcctaagaggaaggacaaagaggacttgacagagagctctgaggattcaatgggc
ggctctccgaacgacatccgtatctctgacatgaggcccaccctggtggagccaccaatg
tacaaaccaaaggtggtgttgctggggaaggataagaaagagtctacagatgaagaggtt
gataaactccactgtctgaaccacagcggctcgtcggccacctactccgactactctccc
tcacagggctcctcgggctcctccaacccacccggcaacacgcactcacacacgctgtcg
cacggacacccccacaatcccgccctaccgcctcctagcaaggaccagggccctcagacg
cactggaccaacagacttgcccagtcatttcccaagcccattgactccaagcccctgctg
tctcagagagaaactcctccatcaggaaccctgcagcaacgtggggatcggcgtccactt
agcgagccttttgactgggttgacgcacctcactacgacaacacaggtttcgatgcagag
gagtctcctctggaccctccttcatctaccaccagtcagggaaaccctccgctgggctct
aaacctcgcagctcatcagcacacggccgccgccccctcctcaggcaagaccgaatcgta
ggggtcccattggaattggacacccagacactccccttccatggcaaccaacgaccgaac
caggacaatgactcctccggacatcctccccagaatccctggcagaattggaccaggacc
ccgagccccctggaggacagaaccgcttttccttccaagctggaccttacacctacttcc
agccccaatcctgatcgcaaggacatggattcaaggcttcagcaaagcacagtgcctttg
cccggcagctggacatatcacgacaatgagggggagcagaacaggaaggatcagctcagt
gtaggcggggtcaacaaggtgaccgtggtgatgagtaaaagctcagatcgcctgtccccc
atgatgaaggagacgagatccaagtttaagaagtcacagagcatagacgagattgacatc
ggctcctacaaggtctacagcattcccatggacagctatagttcatccattgagcagcaa
actagtttggaccgtccagagcttcccggttctatggagcagaccaacatgtcacggtca
cagtctgcccccatgttagatgaggagatgggataccccggacacggatctggcgaccaa
aaccagagacagaaccaaaaacctgccatcccacaaaaggcttaccactttgaccacaac
tacaacccgcaggttcgatggagttgtgaaccattggtgaccatggatcgccgggtccct
ccccctttccccaacacaccagattatgtcaaccactcatcgaaggctttggagtacctc
aaccaaccagggaagacactacccaaagagctagtgagccctcggtatcgtgcttatcca
cccttggagatgttttctttcccccagtcgccaatcaaccaagatggtccgcccagccag
cagcagcaaccaatcccaagtcagcgctccagaccagggtttctaagaagagcagactca
ctggtgagctctacggagctcgccttgttccgacgggttcatgaagctcagcaggaggcg
ctccaagagtctcagtacagacaacaggcggatccccctctttatggccgggctgtctac
tccacccccatggagcactccgcgatgagtaatatggccgacaaccagagtcagatgctg
cacaacaagagaaacggtcgttatgacgacgactaccccacttaccaggagcagaagaag
cccatgattggttatccaaccaagagcctgactcagcggcgtcccctgtctgccagaagt
tatagcactgagacctacggagcatctcaggcacgtccagtgtccgcccgtcccaccatg
gccgctctgctagagaagatgccacctgactacaccctggcaacctgccccgagaagcca
cccgatgacaccatcaaagtaagacctgttgtaccccagaaacctgaagacatcacctcc
aagatgcctgccgactggagacaacagctactcaggcacatagaggcgaaacgactggac
aggagtggtgtcctaaagcacaacacgctcacgctgggcatgctctgtcagggcgggggt
cacggccaggggcgcagcagcactttgaactttaacctttacaataacactaagcatgag
ccccctgctggccgctggctgccactacctccacctccgtctgctaacgctaccccgtct
cagcagggtggcgtgctggacaatgaccaggagggggtgtcaggaagcaaccagtgggct
ccctattcactaggcaggagggacgtcccacctgacaacatgttaaaaaagagcgcccat
tcccacaacccttcccatcaatcacacaacaccatgatcgtcacttcctcttcctcctcc
tcggccactacacctcatcgtgtggtgggtcagcagggctacgatgggatgatgagcaaa
ggaggccaatacaaccaagggatgcagctgtcggtggtcccatccggggggccgggacag
taccaaggcaacatgtctcaagcccctggacaagcttaccccagcggtggcctgcctatg
gccctgtcccaatccggaaaccaaccccagtacaacccccatacctctcacacctcccat
cagcccgctaccaatcctcagtaccatgtcaaccagggcatgggccatagcaaccaggtc
gttatgaccacccacaccaacccacggcctcagagcgctcgctgcctgttgcagactaaa
ggccagaagagcacggatggttttcaggagcagctgtgcgtgagaatagagaagaaccct
ggtctcggtttcagtatctctggtggcatcagcggccaggggaaccccttcaaaccctcc
gacatgggtatctttgttactagggtacagcatgacgggcctgccgcctccgccctgcag
cccggagacaagatactgcaggctaacggacatagttttttacacatggagcacgagaca
gccgtctctctgctgaagagtttcccgcggacggtggacttggtggttctgagagacagc
agcacatgctaa
DBGET
integrated database retrieval system
