Oreochromis aureus (blue tilapia): 116336443
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Entry
116336443 CDS
T07295
Symbol
pdlim5a
Name
(RefSeq) PDZ and LIM domain protein 5a isoform X1
KO
K19867
PDZ and LIM domain protein 5/6/7
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116336443 (pdlim5a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oau04990
]
116336443 (pdlim5a)
Domain-containing proteins not elsewhere classified [BR:
oau04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
116336443 (pdlim5a)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
PDZ
DUF4749
PDZ_6
zf-C3HC4_3
LIM_FHL2-3_N
zf-FPG_IleRS
Motif
Other DBs
NCBI-GeneID:
116336443
NCBI-ProteinID:
XP_039476835
Ensembl:
ENSOABG00000007849
ENSOABG00000021689
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All DBs
Position
LG12:17768319..17850906
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AA seq
585 aa
AA seq
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MTSNYNVTLIGPAPWGFRLQGGKDFNMPLTISRLTDGGKAAKGGIAVGDMVLSIDGISTD
GMNHLEAQNKIKSCTGNLSLTLQKAPSVSKPPPVAPKGNRSDIIKPVAIAHPPLPPHPHD
HSSSHSAVSNNKAPRPYGDCKSESEHPPLQSPFATSIPSPSSAFTPASFHTSPRPPSLSP
PPVSYPSSASSSPPVLVPPQPSVYNTPINLYSTENACEVAMGQRRGLLESQGGALPLQFN
GGPQSILKKPPPPRVPRKHVVDTDIHFYHVPSHADASRKRIMEDTEDWRPRTGTTQSRSF
RILAQITGTENVQNEEADTAKKTNEEYVEPELNSHESAVVKTMIKGPATTYGPQTGLITP
SFGMKGNGSASVPRGPAPARPVPQPHPKDEDTLVQMAEHIPAGTRTPMCAHCNMVIRGPF
LVAMGKSWHKEEFNCAHCRTSLADIGFVEERGSVYCEHCYEDFFAPTCSRCQSKILGEVI
NALKQTWHVYCFLCAYCQQPIRNNTFHLEDGEPYCEPDFYSLFGTGCHGCEFPIEAGDKF
LEALGYTWHDTCFVCAVCCTTLEGQTFFSKKDKPLCKKHAHTLKI
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgaccagcaactacaatgtcactctcataggtcctgccccctggggcttcaggctgcag
ggaggaaaagacttcaacatgcccctcaccatctcgaggctgacggatggtggaaaggca
gcgaaaggtggtattgctgttggagacatggttctttccattgatggcatctccacggac
ggcatgaaccacctggaggcccagaacaaaatcaagagctgcactggcaacctcagcctc
actctgcagaaggcccccagtgtttctaaacctcctcctgttgcaccaaagggcaacaga
tcagacatcataaaaccggtagccattgcccatcctcctcttccaccccatcctcacgat
cattcatccagccactctgctgtgtccaacaacaaggcccccagaccttacggggactgc
aaatcagagagtgaacaccctcctttacagtccccttttgccacttccatcccctctccg
tcctctgcctttacacctgcatccttccatactagtcctcgtcctccttctctttctcca
cctcctgtttcttatccatcctctgcctcctcctccccccctgtcctcgtcccgcctcag
ccttcggtgtataacacaccaatcaacctgtactccactgagaatgcgtgtgaggtggcc
atggggcagaggcggggcctgttggagagtcagggtggagccttaccactgcagtttaat
ggtggacctcaaagtattttaaaaaaacccccgccaccaagagtgcctaggaaacatgtt
gtggatacagacatccatttttaccatgttcccagtcacgctgatgccagcagaaagcgc
ataatggaggacaccgaggactggcgcccacgtactggcaccacccagtccagatctttc
aggattctggctcagatcactggcactgagaatgttcaaaatgaagaagctgacacagcc
aagaagacaaatgaggaatatgtggaacccgaactcaacagccatgagtctgcagttgtt
aagactatgatcaaaggacctgcgacaacctatggtccacagactggtttgattacccca
tcttttggtatgaagggtaacggcagtgccagtgtcccaaggggtcctgctccggcccga
cctgttcctcagccccaccctaaagatgaggacaccctggtacagatggcagaacatatt
cctgctggcactcgtacgccaatgtgtgcccactgcaacatggtcatcagaggacctttt
ttggtagcaatggggaaatcgtggcataaggaagaatttaactgtgcacactgccgaaca
tccctggcagatataggctttgttgaagaacggggatccgtctactgtgaacactgctat
gaagacttctttgctccaacatgcagccgctgccagtctaagatactaggggaggtgata
aatgccctcaagcagacttggcatgtctactgctttctgtgtgcttactgtcagcaacca
atcagaaacaacactttccacctggaggatggagaaccatactgtgaaccggacttttac
agcttgtttgggactggctgtcatggctgtgagtttcccatcgaggctggagacaaattc
ctggaagcccttggttacacctggcatgatacctgctttgtatgtgctgtgtgctgtacc
acactggaaggccagaccttcttctccaaaaaggacaaacctctttgcaagaagcatgct
cacacactgaagatatga
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