Oreochromis aureus (blue tilapia): 116336494
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Entry
116336494 CDS
T07295
Symbol
nup88
Name
(RefSeq) nucleoporin 88
KO
K14318
nuclear pore complex protein Nup88
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116336494 (nup88)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oau03019
]
116336494 (nup88)
Messenger RNA biogenesis [BR:
oau03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116336494 (nup88)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup88
HTH_32
HAUS-augmin3
PqqD
STX6_10_61_N
Motif
Other DBs
NCBI-GeneID:
116336494
NCBI-ProteinID:
XP_031616253
Ensembl:
ENSOABG00000017091
LinkDB
All DBs
Position
LG14:complement(6876640..6879314)
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AA seq
719 aa
AA seq
DB search
MAALNSEQWLNDLPNHTIFKIIREKLDLERTSSERGIAKNLTFCLGADFFVWDDSDRVFY
TTNLRQLNTEESSSSGKYQTLLCINPPLFEVCQVLVSPTQHHVALVGQRGVSVLELPLRW
GKRSEFEGGRSKINCKTIPVAERFFTSSPSVSLRQAAWYPSETDEPHMVLLTSDNTIRFY
GLKSPQTSAKILPVSQSEDESSLHPPVRSYAASLGEIAVAFDFGPISSPPRQLPGQVSKD
QLVYPLYILYENGETYVSYTSQVNGISLSKPVGPLPMYPAAEDNYGYDACAILCLPCVPS
ILVIATETGTLYHCVVLESEEEDDTGAVEKWIRGTETVPALYVFECVELELILKVATGED
EEPQEFDFTCPIKLHRDPLCQHRYHCTHEAGVHSVGLIWVNKLQRFLKSDEEDKDSLQEL
AAEKRCIVEHILCTRPLLTSQSAPIRGFLIVSDLALGATMICITSNYECILLPLLSSIRP
PSPPLLCSHPGLGSASSPLRGLAEDSFEQHIRNILARSSTNPLVLKAGDKDTSPPPPECL
ELLSRATQVFREEYILKQDMAREEMQRRVKLLTGQKNKQLEELSLCREERKSLREAAERL
ADKYEDAKYRQETIMNRVKKVLCSLQSQLPILSNSEKEMKKELQTINDQLKHLDNCIRQV
NMKMEYQKTQVDKDMPGTRARVSLNAPQKKVVQDVLKEQGQQIGDMMKQIKDIKNHFSF
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggcggcactcaattcagaacagtggctgaatgacttaccgaaccacacgatattcaaa
ataatacgcgagaagttggatttggagcgcacctcgagtgaaagagggatcgctaagaac
ctcacgttttgtttgggagcggattttttcgtgtgggacgattcagaccgcgtgttttac
acaaccaacctgcggcagttaaacacagaggagagctccagtagcgggaagtatcagacc
ttgctgtgcatcaacccgccgctctttgaagtgtgccaggtgctggtgagcccgacacag
caccatgtcgcgctggtcggtcaacgaggcgtctcggtcctggagcttcctctgcggtgg
ggcaagaggtccgagtttgaaggcggacgcagcaaaatcaactgcaagacaatccctgtg
gcggagcgcttcttcaccagctcaccgtcggtcagtctgcgacaggcggcttggtaccct
agcgagactgacgagccacatatggtgctgctcacttcagacaacacgatcagattttac
ggcttgaagtctccgcagacatcggccaaaatcctgccagtgtcgcagtcagaagatgag
agcagcctccaccctccggtgcgttcgtacgcagcttctctgggagagatagcagtggcg
tttgactttgggccgatttcatcccctcctcggcagctgccaggacaggtctccaaagac
cagctggtctaccctctctatattctttacgaaaatggggagacctatgtgagctacacg
agccaggtaaacggtataagtctaagtaaacccgttggacctctccccatgtatccagca
gcagaggataactatggctatgatgcttgtgccattctgtgcctgccatgtgttccgagt
atcttggtcatcgccacagaaacgggcacactgtatcactgtgtcgtgctggagtctgaa
gaagaggacgacacgggggcagtggaaaagtggatccgaggcacagagacagtgccagct
ctttatgtgtttgagtgtgttgagctagagctcatacttaaagtggcaacgggagaggac
gaggagccgcaagagtttgatttcacctgtccaatcaaactgcacagagaccccctctgt
cagcaccggtatcattgcacccatgaagcaggagtgcacagcgtggggctaatctgggtc
aacaagctgcagaggttccttaaatcagatgaggaggataaggacagtctccaggagctg
gctgctgagaagcgctgcatcgtagagcacattctttgcaccagaccgctcctgaccagt
cagtcggctccaattcgtggttttttgattgtgtctgacctcgccttgggcgccaccatg
atctgcatcaccagcaattacgagtgcattctgttaccccttctgagctccattcgccct
ccctcccctcccctgctttgctcccacccaggtctgggctctgccagctcccctctgcgt
gggctggccgaagactcctttgagcagcacattcgcaacatcctggcacggagctccacc
aatcctcttgtacttaaagctggagacaaggacacatcaccaccacctccagagtgtctg
gagctcctcagcagagccacacaggtgttccgtgaggagtacattctcaagcaggacatg
gctcgtgaagagatgcagaggagggtgaaactcctgacaggccagaagaacaagcagctg
gaggagttgtctctctgcagggaggagaggaagagtttgagagaagcagcagaaaggttg
gctgataaatacgaagatgcaaagtatcgccaagaaaccattatgaacagggttaagaaa
gtgttgtgtagcctgcaaagccagctacccatactgtcaaacagtgaaaaagaaatgaag
aaggagctgcagaccatcaatgatcaactgaaacacctggacaactgcatcagacaggtg
aacatgaagatggagtaccagaagacacaagtggacaaggatatgcccggaactagggca
agagtctctctcaacgctccccagaaaaaggttgttcaggatgtcctcaaagaacaagga
cagcaaattggtgacatgatgaagcagatcaaagacatcaaaaatcattttagtttctaa
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