Oreochromis aureus (blue tilapia): 120434838
Help
Entry
120434838 CDS
T07295
Name
(RefSeq) transforming growth factor-beta receptor-associated protein 1-like
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
oau
Oreochromis aureus (blue tilapia)
Pathway
oau04140
Autophagy - animal
oau04148
Efferocytosis
oau05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
oau00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120434838
04148 Efferocytosis
120434838
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120434838
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oau04131
]
120434838
Membrane trafficking [BR:
oau04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
120434838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
TPR_Vps41
zf-Vps39_C
Clathrin
Stc1
Motif
Other DBs
NCBI-GeneID:
120434838
NCBI-ProteinID:
XP_039459215
LinkDB
All DBs
Position
LG19:complement(14153785..14156548)
Genome browser
AA seq
378 aa
AA seq
DB search
MNDGEKLQQLVAFPNKCSLDLCVPVLEQHHRFFALGSLYESHGMHTDAVKTWVKITDGLC
KDSSCSDVYGHIVATLSQLRDKDTVWAFADWTLQRNQETGVQIFIKRPPDGQFETQDVLT
FLETFPLALIFYLEYLIHDLNSEEESHHNRLALAYVTQMLQKEDERVRVTRGKLQQLLWE
SKFYNISTVYDRLKSTTLHPEKAILLGRSGEHYQALQMLVHEEKDLQAAEAYCCKAAQDQ
DSQFRQVLLLTLLQIYLSSKDLTGAAVDLLNSQPQVFALEKVLQLLPESWSVQLVSQFLV
VSLRETFHQRQMVRLQQALARAELLRHKVTWMQASKTKFRVDKEQKCRVCQGDLTDPHFA
RNLRGEVVHVSCMGYSAL
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatggtgaaaaactccaacagcttgttgcttttcccaataagtgcagtctggac
ctctgtgtccctgttctggagcaacaccacagattttttgctttaggttccctctatgaa
agccacgggatgcacactgatgcagtaaagacttgggtgaagattacagatggcttgtgt
aaagactcttcctgctcagacgtatatggacacatagtggcgactctcagtcagctcaga
gacaaagacaccgtgtgggcatttgcagattggactttacaaagaaaccaagagacaggt
gtgcagattttcatcaagcgcccaccagatggtcaatttgaaacacaagatgtcctcaca
ttcttggagacgtttccactggcgttgattttctatcttgagtacttaatccatgattta
aatagcgaggaagagagccatcacaaccgtctggccctggcatatgttactcagatgctg
caaaaggaagatgaaagagtgagggtgaccagagggaagctgcagcagctgctatgggag
tccaaattctataacatctccacagtgtatgatagattaaagtcaacaaccctacaccca
gagaaggccattctccttggtaggtctggtgaacactaccaagcactgcagatgcttgta
cacgaggagaaagacctccaggctgcagaggcctactgctgcaaggctgcccaggaccag
gactcacaattcaggcaggtcctcctgctcactcttctccaaatctacctgagctccaag
gatctcacaggtgcagctgtggatctacttaacagccaacctcaggtttttgcactggag
aaggtactccagctccttcctgagtcctggtctgttcaactggtctctcagtttttagtc
gtatccctcagggaaaccttccaccagaggcagatggtgagactgcaacaggctttggcc
cgggcggagctcctgaggcacaaggtcacttggatgcaggcctcaaaaacaaagttcaga
gtggacaaggagcagaaatgtagagtttgccagggagaccttacagacccacactttgcc
cgtaacctgcgaggtgaggtggtgcacgtaagctgcatgggctactctgcattataa
DBGET
integrated database retrieval system
