Oceanicaulis alexandrii: ABWI01_00135
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Entry
ABWI01_00135 CDS
T10771
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oax Oceanicaulis alexandrii
Pathway
oax03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ABWI01_00135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oax03021
]
ABWI01_00135
03400 DNA repair and recombination proteins [BR:
oax03400
]
ABWI01_00135
Enzymes [BR:
oax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ABWI01_00135
Transcription machinery [BR:
oax03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ABWI01_00135
DNA repair and recombination proteins [BR:
oax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ABWI01_00135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
DUF211
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
XHC20358
LinkDB
All DBs
Position
13748..14767
Genome browser
AA seq
339 aa
AA seq
DB search
MIEKNWQELIRPMKPEIQPGFDPVRQAKIIAEPLERGFGMTLGNALRRILLSSLQGASIT
AVQIDSVLHEFSSIKGVREDVTDIILNLKQVALRMHGEGPKRLTLKKQGPGEVTAADIEE
TADVEIINKDHVICTLDEDADVRMVLTVNTGKGYVPADRNRPEDAPIGLIGVDALYSPVK
RVAYRVENTREGQVLDYDKLILEVETNGAVTPEDAVAYAARILQDQFQIFVNFEEPSEAR
AAEDDKPELDFNPALLKKVDELELSVRSANCLKNDNIVYIGDLIQKSEAEMLRTPNFGRK
SLNEIKEVLAQMGLHLGMDAPNWPPENIEDLAKKYEDQI
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
gtgattgagaagaactggcaggaactgatccgcccgatgaagccggaaattcaacctggc
tttgatccggtgcgccaagccaaaatcattgctgagccgctcgagcgcggcttcggcatg
actttgggtaatgcgctgcgccgtattctgctgtcctcgctgcagggcgcgtcgatcacg
gccgtgcagattgattccgtgctgcacgagttctcgtccatcaagggcgtgcgcgaagat
gtcactgacatcatcctgaacctcaagcaggtcgctctgcgcatgcatggcgaaggtccc
aagcgtctgaccctgaaaaagcagggcccgggcgaagtgaccgccgccgacatcgaagag
accgccgacgtcgagatcatcaacaaggatcacgtcatctgcaccctcgacgaggatgcg
gacgtgcgcatggtcctgaccgtgaacaccggcaagggctatgtccccgctgaccgtaac
cgtcccgaagacgccccgatcggcctcatcggcgtggatgcgctctacagcccggtcaag
cgcgtggcctatcgcgtggaaaacacgcgtgaaggtcaggtgctcgactatgacaagctg
atcctggaagtcgaaaccaacggtgctgtgacccctgaagacgccgtggcgtacgccgcg
cgcatcttgcaggaccagttccagatcttcgtgaacttcgaagagccctctgaagcccgt
gcggccgaagatgacaaacccgagctggacttcaacccggccctcctcaaaaaggtggac
gagctggaactgtccgtgcgttcggcgaattgcctgaagaacgacaacatcgtctatatc
ggcgaccttattcagaagtccgaggcggaaatgctccgcaccccgaacttcggtcgcaaa
tcgctcaacgagatcaaggaagttctcgcacagatgggtctgcatctgggcatggacgcg
ccgaactggccgccggagaacatcgaagatctcgccaaaaaatatgaggatcaaatctag
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