Oceanicaulis alexandrii: ABWI01_00875
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Entry
ABWI01_00875 CDS
T10771
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
oax Oceanicaulis alexandrii
Pathway
oax03030
DNA replication
oax03430
Mismatch repair
oax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWI01_00875 (dnaE)
03430 Mismatch repair
ABWI01_00875 (dnaE)
03440 Homologous recombination
ABWI01_00875 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oax03032
]
ABWI01_00875 (dnaE)
03400 DNA repair and recombination proteins [BR:
oax03400
]
ABWI01_00875 (dnaE)
Enzymes [BR:
oax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWI01_00875 (dnaE)
DNA replication proteins [BR:
oax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ABWI01_00875 (dnaE)
DNA repair and recombination proteins [BR:
oax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ABWI01_00875 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
Motif
Other DBs
NCBI-ProteinID:
XHC17761
LinkDB
All DBs
Position
165742..169194
Genome browser
AA seq
1150 aa
AA seq
DB search
MSDAPFVHLRVRSPYSLLEGAIRIKETAALCKTFSMPAAAITDSNNLFGALEFSEVLSGE
GVQPITGVTLSVQVEAPRPGERAKPDGTLVLLAQSQAGYANLMKLSSAAYLDVAATDEPH
VPIEKVLELSEGLICLTGGFDGALNRFLCTGREGQARALLDRLRASFPDRLYLELQRHGR
ADDVIAESWLVDQAYDLDLPLVATNEPHFSKPEFYQAHDALLCISEGAYVSMDDRRKLTA
EHDFKSGAAMAERFSDLPEAISNTLEIAKRCSFRPRTSKPILPRFPTQGDRNEAEELRAR
ATEGLEDRLSKIEMADTREAYFERLDYELGVIERMGFPGYFLIVSDFIQWAKSQDIPVGP
GRGSGAGSLVAWALTITNLDPLRFGLLFERFLNPERVSMPDFDVDFCQDRRGEVIRYVQE
RYGQDRVAQIITFGTLQARAVVRDVGRVLQLPFGLVDRIAKQVPNNPAQPVTLAEAVKTE
PKLQEMQRTDDMVDQLITVALQLEGLFRNASTHAAGVVIGDRPLTDLVPLYQDPRSDLPA
TQFNMKWVEPAGLVKFDFLGLKTLTVIARALSYIESAGLARPDMDAISLEDPATYELLGA
GSSIGVFQLESTGMRDTLRKLKPDSIEDIIALISLYRPGPMKNIDVYVDRKFGRKKPDYL
HTDLEPVLKETYGVIIYQEQVMQIAQILSGYSLGEADLLRRAMGKKKKEEMDKQRVRFNE
GAEKRGVSKDKANYIFDLVAEFAGYGFNKSHAAAYALIAYQTGWLKANHPAAFMAGLMSL
DSANTEKLAVFFQESKRIGLEVLPPDVNASEADFALEEGKIRYALGAIRNVGYSAMEHVA
EVRRTGGPYKDVFDFAERVDPRQVNKRAFENLARAGAFDTLEPDRAKALASAEMLLSVSQ
NAQSERDSAQASLFGGGGESGGAKLERPNLPDPEPWDPVRRLDEELAAIGFYLSGHPLDD
MMPALARRGVVVFADLPSKAAEGARAARLAAVVRRRQEKVSQRSGEKFAFVTLSDPSGEF
EALVPPKVLREIREVIEPGASVLVNAKIEAQDEGLRLIIDGADTIDPFAAEHIGQGLKIR
LGQSGALEPLRKRIDRADGREGAVKGSIHLIVPLSDGRLAEVRLPGRHAVDPAARAAVKA
VAGVLEVETL
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgatgcccccttcgtccatttacgcgtccggtcgccatactccttgctggagggg
gcgatccggatcaaggagacggcggcgctgtgcaagaccttctccatgccggcggcggcg
atcaccgattccaacaatctgtttggcgcgctcgaattttctgaagtcctctcgggcgag
ggcgtccagccgatcaccggggtgacgctgtctgttcaggtcgaggcgccgcgtccgggc
gagcgggcgaagcctgacggcacgctggttttactggcgcaatcccaagcgggctacgcc
aatctgatgaagctgtcttcggcggcgtatctcgacgtcgccgccaccgatgagcctcat
gtgccgatcgaaaaggtgcttgagctcagtgaaggcctgatctgtctgaccggcgggttt
gacggcgcgctgaaccgctttctttgcaccggccgggaggggcaggcgcgggcccttctg
gatcgtctgcgcgcgagttttccggaccggttgtatctcgagcttcagcgtcatggtcgc
gccgatgacgtcatcgccgaatcctggcttgtcgatcaggcgtatgaccttgatctgccg
ctggtggcgacgaacgaaccgcatttctccaagcctgaattttatcaggcccatgatgcg
ttgctgtgcatctccgaaggcgcctatgtcagcatggatgaccggcgcaagctgaccgcc
gagcatgatttcaaatccggcgcagccatggcggagcggttctctgatctgcctgaagcg
atctccaatacgcttgagatcgccaaacgctgctccttccggccgcgtacctccaagccg
atcctgccgcgctttcccactcaaggcgatcgcaacgaggccgaagaattgcgcgcccgt
gcgactgagggcctggaggaccggctctcaaaaatcgaaatggccgatacgcgagaggcg
tatttcgaacggctggattatgagctcggcgtcatcgagcgcatggggtttccgggctac
ttcctgatcgtgtctgactttatccaatgggcgaagtcccaggatattcctgtggggcca
gggcgggggtcgggcgcaggctcgcttgtcgcctgggcgctgaccatcaccaaccttgat
ccgcttcggttcggcctgctgtttgagcgcttcttgaaccctgaacgcgtctccatgcct
gactttgacgtggacttttgccaggatcgccgtggcgaggtgatccggtatgtgcaagag
cggtacggccaggatcgggtggcgcagatcatcactttcggcaccttgcaggcgcgcgcc
gtggtgcgcgatgtgggccgggtgctgcaattgccgttcgggctggtggaccggatcgcc
aagcaggtgcccaacaatcccgcccagcccgtcaccttggcggaagcggtgaagaccgag
cccaaattacaggagatgcagcgcaccgacgacatggtcgatcagctgattactgtggcc
ttgcaattggagggcttgttcagaaacgcctccacccacgccgccggcgtggtgattggt
gaccggccgctgacggatctggtcccgctttatcaggatccgcgctcggacctgccggcc
acccagttcaacatgaaatgggtggagccggccgggctggtgaaatttgactttctgggc
ctgaaaaccctcaccgtgatcgcacgggcgctgagttatatcgaaagcgcggggctggcg
cgtccggacatggacgcgatcagtctggaagatcccgcaacctacgagcttctgggcgcg
ggatcctccatcggcgtgttccagcttgaaagtacgggcatgcgcgacacgctgcgcaag
ctcaagcctgacagtattgaagacatcatcgcgctgatctcgctttatcggccgggcccg
atgaagaatatcgacgtctatgtggaccgcaaattcgggcgcaagaaacccgattacctg
cacaccgatctcgagcctgtcctgaaagagacctacggggtcatcatctaccaggaacag
gtgatgcagatcgcccagatcctgtccggctattctctgggagaggccgaccttcttcgc
cgcgccatgggcaagaagaagaaggaggagatggacaagcaacgcgtgcgctttaacgaa
ggggcggaaaagcgcggcgtgtccaaggacaaggccaattacatcttcgacctggtggcc
gagttcgccggctatggctttaacaaatcacacgccgccgcctacgccctgatcgcttat
caaacggggtggctgaaagccaatcaccccgccgccttcatggccggcctgatgagcctt
gatagcgccaacaccgagaagctcgctgttttcttccaagaatccaaacgcatcggtctt
gaggtcctgccgccggatgtgaacgcgtctgaggcggacttcgctcttgaggaaggcaag
atccgttatgcgctcggcgccatccgcaatgtgggttattcggcgatggagcatgtggct
gaggtgcgccggacgggcgggccttacaaggatgtgtttgatttcgccgaacgcgtggat
ccgcgccaggtgaacaagcgcgcgtttgaaaacctcgcgcgcgccggcgcgttcgacacc
ttggagcccgatcgcgccaaggcgctggcgtccgctgaaatgctgttgtccgtatcccag
aacgcccagtccgaacgcgacagcgcgcaagcgtccttgtttggcgggggcggggagtcc
ggcggcgccaaactcgagcgccccaatctgcctgaccctgagccttgggatccggtgcgg
cggctggatgaagagctcgccgccatcggcttttacctgtccggccacccgcttgatgac
atgatgccggccctggcccggcgcggcgtggtggtctttgcagacctgccctccaaggcc
gccgagggcgcccgcgctgcgcggctcgccgccgtggtgcgccgccgtcaggaaaaggtg
tcacagcggtcgggcgagaaattcgcctttgtcacgctttcagacccttcgggcgagttt
gaggcgctggttccgcccaaggtcttgcgcgaaatccgtgaagtgatcgaaccgggcgcg
tcggtgctggtgaacgccaagatcgaggcgcaggatgaagggcttcggctgatcattgat
ggcgccgacaccatcgacccctttgcggcggagcatattggtcaggggctcaagatccgt
ctggggcaatctggcgcgctcgagcccttgcgaaagcgtatcgaccgggccgatggccgg
gagggcgctgtgaaaggctccatccatctgatcgtgcctttgtcagacggacgtctggcg
gaagtgcgcctgccggggcgtcatgctgtcgacccggccgcccgcgcggcggtgaaggcg
gtcgctggcgttttggaggtggaaacgctgtaa
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