Oceanicaulis alexandrii: ABWI01_07255
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Entry
ABWI01_07255 CDS
T10771
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
oax Oceanicaulis alexandrii
Pathway
oax03030
DNA replication
oax03410
Base excision repair
oax03420
Nucleotide excision repair
oax03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ABWI01_07255 (polA)
03410 Base excision repair
ABWI01_07255 (polA)
03420 Nucleotide excision repair
ABWI01_07255 (polA)
03440 Homologous recombination
ABWI01_07255 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oax03032
]
ABWI01_07255 (polA)
03400 DNA repair and recombination proteins [BR:
oax03400
]
ABWI01_07255 (polA)
Enzymes [BR:
oax01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ABWI01_07255 (polA)
DNA replication proteins [BR:
oax03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
ABWI01_07255 (polA)
DNA repair and recombination proteins [BR:
oax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
ABWI01_07255 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWI01_07255 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
HHH_2
NYN_YacP
Taq-exonuc
Motif
Other DBs
NCBI-ProteinID:
XHC18979
LinkDB
All DBs
Position
1490222..1492996
Genome browser
AA seq
924 aa
AA seq
DB search
MAVTRPVDSSSHVYLVDGSGYIFRAYHALPPLTRSDGTPVGAVQGFCNMLWKLLEDLKGE
DQPTHLAVIFDHSSKTFRNELYDQYKANRPEPPEDLVPQFKLIREATQAFELPCIEMEGF
EADDLIATYARLAAEKGARVTVASSDKDLMQLVNDHVTMLDPMKSKRIGHDEVVEKFGVA
PDRVIDVQSLAGDSVDNVPGVPGIGIKTAAQLINEYGDLDALLERAGEIKQPKRREKLIE
HAEDARISRTLVTLKLDVPITDELDVFGAAEPDAEKLVGFLKSMEFRTLTRRVEEGLGGP
VADETGDATAPIDRSKYETVQTVEALERWIEKSRAARIIAVDVETDALSAVASRLVGVSL
ATAPGEACYIPLGHEGGDLADGGGKPEQIDEGEALGRLKAILENDAILKVGQNFKYDLAV
FQRYGVRVAPYDDTMLISYVQAAGLHNHGMDELSERYIGHKCISFKEVCGSGKSQKRFSE
IDLQTATEYAAEDADVTLRLWEILKAGLAGKGLSTVYETLERPLPQVLTDMELAGVKVDV
AQLSRLSSDFAQKMAEAEETAHDLAGHKFNLGSPKQIGEILFGEMGLPGGKKTKSGAWST
DAAVLDELAEQGHDLPRALLTWRQFAKLKSTYSDALKDAINPNTGRVHTSFSLAATTTGR
LSSSEPNLQNIPIRTEEGRKIREAFTAEPGHVIVAADYSQIELRLLAHIADVEALKQAFR
EGQDIHALTASEMFGVPLEDMDPGTRRNAKAINFGIIYGISAFGLANNLGIGRDEAKRYI
DSYFEKFPGIKAYMDAMKEEAKAKGCVNTIFGRRIHLPGIKDKNPSVRQFTERQAINAPI
QGAAADIIRRAMVRMPAALADAGLKTRMLLQVHDELVFEAPESEADQVIKLVTEVMMGAA
APAQSLSVPLEVEAKAASTWGQAH
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atggccgttactcgtcctgttgattcatccagccatgtctatctggtggacgggtcgggc
tatatctttcgcgcctatcacgccctgccgccgctgacccggtcggacggcacgcccgtg
ggcgcggttcagggcttttgcaacatgctgtggaagctgctggaagatctcaagggcgag
gaccagcccacgcacctcgcagttattttcgatcattcgtcgaaaaccttccgcaatgag
ctttacgaccagtacaaggccaaccggcccgagccgcccgaagacctggtgccgcagttc
aaactgatccgcgaagccacccaggcgttcgagctgccctgcatcgagatggaggggttt
gaggcggatgatctgatcgccacctatgcccgtctcgccgccgagaagggcgcgcgcgtc
actgttgcgagctctgacaaggatctgatgcaactggtcaacgatcatgtgacgatgctc
gatccgatgaagtccaagcgcatcggtcatgacgaggtggtcgagaagtttggcgttgcg
ccggaccgggtgatcgacgtgcaatctttggcgggcgacagcgtcgataatgtgccgggc
gttccgggcatcggcatcaagaccgccgcccagctgatcaatgaatatggcgatctggat
gcgctgctggagcgcgcgggagaaattaaacagcccaagcgccgggaaaagctgatcgag
catgccgaggacgcccgcatctcacgcacgctggtcacgctgaaactcgatgttccgatc
acggatgagctcgacgtgttcggcgcggcggagccggatgctgagaagctcgtcggcttt
ctcaaatccatggagtttcgcaccctgacccgccgggtcgaggaagggctgggcgggccg
gtcgccgatgaaaccggcgacgccaccgcgcccatcgaccgctcgaaatatgaaaccgtg
cagaccgtcgaggcgctcgagcgctggatcgagaaatccagggccgcccgcatcatcgcc
gtggatgtagagacggacgccctctccgccgtcgcttcgcgccttgtgggcgtgtcgctc
gccaccgccccgggcgaagcgtgctacattccgctcggccatgaaggcggcgatctggcc
gatggcggcggcaagcctgagcagattgacgagggcgaggcgctgggccgcttgaaagcg
atcctggaaaacgacgccattctgaaagtgggtcagaacttcaaatacgatctggcggtg
ttccagcgctatggcgtccgtgtcgcgccttatgacgacaccatgcttatcagctatgta
caggcggcgggccttcataatcatggcatggacgagctgtcagagcgttatattggccat
aaatgcatttcgttcaaagaagtctgcgggtctggcaaatcccagaaacgcttttccgag
atcgaccttcagaccgcgaccgaatacgccgccgaagacgccgacgtcaccttgcgtctg
tgggagattttgaaagctggtctcgccggcaagggcctgtccaccgtctatgaaaccctc
gaacgcccgctgccgcaggttctgaccgatatggagctggcgggggtgaaggttgacgtc
gcccagctgtcgcgcctgtcgtcggactttgcgcagaaaatggctgaggccgaagagacc
gcacacgatctggcgggccataaattcaatctcggcagccccaagcagatcggcgaaatc
ctgtttggcgagatgggcctgcccggcggcaagaagaccaaatccggcgcctggtctacg
gacgccgccgtgctggatgagctggccgagcaaggtcatgacctgccgcgcgcacttctg
acctggcgacaattcgccaagctcaaatctacctattcggacgccctcaaagacgcgatc
aatcccaatacgggccgggttcacaccagcttctcgctggccgcgaccacgaccgggcgc
ttgtcgagctcggaacccaacctgcaaaacatccccatacggacagaagaaggccgcaag
atccgcgaggccttcaccgccgagcccggtcatgtgattgtcgcggcggactattcccag
atcgaactgcgtctgctggcccatatcgctgatgtggaagcgctgaaacaggccttccgc
gagggccaggacattcacgccctgacggcgtctgaaatgttcggcgtgccgcttgaggac
atggacccaggcacccgccgcaacgccaaggcgatcaatttcggcattatctacggcatt
tctgcctttggcctggccaataatctcggcatcgggcgcgatgaggccaagcgctatatc
gacagctatttcgaaaaattccccggcatcaaggcctatatggacgcgatgaaggaggag
gcgaaggcgaagggctgcgtcaacaccatcttcggtcgccgcatccatttgccaggcatc
aaggacaagaatccctcagtccgtcagttcacggaacgccaggcgatcaacgcgccgatc
cagggcgccgccgccgacatcattcgccgcgccatggtgcgcatgcccgccgccctggcc
gatgcggggctgaaaactcgcatgctgctgcaagtgcatgatgaactggtgtttgaagcg
ccggaaagcgaagccgatcaggtgatcaagctggtcaccgaggtgatgatgggcgccgcc
gcgccggctcagtccctgtccgtgccgttagaagtcgaagccaaggctgcgagcacctgg
ggccaggcgcactag
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