Oceanicaulis alexandrii: ABWI01_08050
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Entry
ABWI01_08050 CDS
T10771
Symbol
rpsA
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
oax Oceanicaulis alexandrii
Pathway
oax03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
ABWI01_08050 (rpsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
oax03011
]
ABWI01_08050 (rpsA)
Ribosome [BR:
oax03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
ABWI01_08050 (rpsA)
Bacteria
ABWI01_08050 (rpsA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
XHC19126
LinkDB
All DBs
Position
1682068..1683765
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AA seq
565 aa
AA seq
DB search
MSDTQTSAPSRDDFASMLEASLAGRDLMEGAVVRGTVTAVLHDTVVIDVGLKTEGRVALR
EFTGPGSEAPKLGEQVDIYLERIENALGEAVLSRDKARREEAWDRLETTFESKEPVNGAI
VGRVKGGFTVDLGGASAFLPGSQVDIRPVRDVAPLMNKEQPFAILKMDRPRGNIVVSRRA
VLEESRAEQRAELVGQLAEGEVREGVVKNITDYGAFVDLGGIDGLLHVTDMSWSRVGHPS
EVVEVGQTVQVQIIKINKETQRISLGMKQLQSDPWDGVALKYPNGAVFKGRVTNIAEYGA
FVELEPGVEGLVHVSEMSWTKKNVHPGKIVSTSQEVDVMVLDVDPDKRRVSLGIKQTQRN
PWEVFAEAHPVGAEVEGEVKNITEFGLFIGVDEEIDGMVHLSDLDWDRSGEDAIQDYKKG
DSVRAKVLDVDVEKERVSLGVKQLGGDPMDEGGFKRGETVTCTVTEITTGGVEVSLGPDN
LVKAFIRKSDISRDRAEQRPERFAVGDKVDARVTNIDKASRRVSVSIKALEMAEEKEAVE
QYGSSDSGASLGDILGAALKGQDEE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacacccaaacctcggccccgagccgcgatgatttcgcgtcaatgctggaagcg
agcctcgccggccgcgacctgatggaaggcgctgtcgtgcgcggcaccgtcaccgccgtg
ctgcacgacaccgtcgtcatcgacgtcggtttgaaaaccgaaggccgcgtggccctgcgc
gaattcaccggtcctggctcggaagcgccgaaactgggcgaacaggtcgacatctacctt
gagcgcatcgaaaacgcgctcggtgaagccgtcctgtcgcgcgacaaagcccgtcgcgaa
gaagcctgggaccgtctggagacgacgttcgaatccaaagagccggtcaacggcgcaatc
gtgggccgcgtcaaaggcggcttcaccgtggatctgggcggcgcttcggccttcctgccg
ggctctcaggttgacatccgtccggtgcgcgacgtcgcgccgctgatgaacaaggaacag
ccgttcgcgatcctgaaaatggaccgtccgcgcggcaacatcgtggtctcccgccgcgct
gtcctggaagaatcccgcgccgagcagcgcgctgagcttgtcggtcagctggccgaaggc
gaagtgcgtgaaggcgtcgtcaagaacatcaccgattacggtgcgttcgtggatctgggc
ggcattgacggcctgctgcacgtcaccgacatgagctggtcgcgcgtgggccatccgagc
gaagtggtcgaagtcggccagaccgttcaggtgcagatcatcaagatcaacaaagagacc
cagcgcatctcgctcggcatgaagcagctgcagtccgatccgtgggacggcgtggcgctg
aaatacccgaacggcgctgtgttcaaaggccgcgtgacgaacatcgccgaatacggcgcg
ttcgtggagctggagccgggcgtcgaaggtctggtgcacgtctccgagatgagctggacc
aagaagaacgtccatccgggcaaaatcgtctccacctcccaggaagtggacgtgatggtg
ctcgacgtggatccggacaagcgccgcgtttcgctgggcatcaagcagacccagcgcaat
ccgtgggaagtgttcgcggaagcgcacccggtcggcgctgaagtcgaaggcgaagtcaag
aacatcaccgaattcggtctgttcatcggcgtcgacgaagaaatcgacggcatggtgcac
ctgtccgatctcgactgggatcgttcgggcgaagacgccatccaggactacaagaaaggc
gactccgtgcgcgccaaggttctggacgtcgatgtcgagaaagaacgcgtctccctgggc
gtcaagcagctgggcggcgatccgatggatgaaggcggcttcaagcgcggcgagaccgtg
acctgcaccgtcactgaaatcaccactggcggcgtggaagtcagcctgggcccggacaac
ctggtcaaggcgttcatccgcaagtccgacatctcccgcgatcgcgccgagcaacgtccc
gagcgctttgcggtcggcgacaaggtcgacgcacgcgtcaccaatatcgacaaggcctct
cgccgtgtttccgtatccatcaaggcgctggaaatggcggaagagaaagaagccgtcgaa
cagtacgggtcttctgactccggcgcgtccctgggcgatatcctgggcgccgcactgaaa
ggtcaggacgaggagtaa
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