Oceanicaulis alexandrii: ABWI01_09040
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Entry
ABWI01_09040 CDS
T10771
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
oax Oceanicaulis alexandrii
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oax03016
]
ABWI01_09040
Enzymes [BR:
oax01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
ABWI01_09040
Transfer RNA biogenesis [BR:
oax03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ABWI01_09040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
XHC19315
LinkDB
All DBs
Position
1874540..1875154
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AA seq
204 aa
AA seq
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MTIHFHREDLPDGLDLGKRVAIDTETQGLSLVRDGLCLVQLSAGDGDAHIVQPDRSTYDC
PNLKALLADTSVEKLLHFARFDLAIVERDLGVTMTPVYCTKIASKLVRTYTDRHGLKDVC
REIAGVELSKQQQSSDWAAYDLSEAQLNYAASDVLYLHAIADGLSAMLEREGRMDIARAC
FDFLPNRARLDLMGWDETDIFAHS
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccattttcatcgcgaggatttgccggacgggctggatctgggcaagcgggtc
gcgatcgatacagaaacccagggcctgtctctggtgcgcgatggtctgtgcctggtgcag
ctctcggcgggtgatggcgacgcccatatcgtccagccggatcgcagcacctatgactgc
cccaacctcaaggcgctactggcggatacaagcgttgaaaagctgttgcactttgcgcgc
tttgatctggcgatcgtcgagcgcgatctgggcgtcaccatgacgccggtctattgcacc
aagatcgcgtcaaaactggtgcgcacctataccgaccgccacggcttgaaagacgtctgc
cgcgagatcgccggcgtagagctgtccaaacagcagcaaagctcggactgggcggcctat
gatctgagcgaggcccagctcaattacgctgcgtccgacgtcttgtatctgcacgctatc
gcagatggtctcagcgccatgctggagcgcgaaggccggatggacatcgcgcgggcatgt
tttgactttctgcccaaccgtgcgcgtctggacctgatgggctgggatgaaaccgatatc
ttcgcgcactcctga
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