Oceanicaulis alexandrii: ABWI01_12905
Help
Entry
ABWI01_12905 CDS
T10771
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
oax Oceanicaulis alexandrii
Pathway
oax03420
Nucleotide excision repair
oax03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABWI01_12905
03430 Mismatch repair
ABWI01_12905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oax03400
]
ABWI01_12905
Enzymes [BR:
oax01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABWI01_12905
DNA repair and recombination proteins [BR:
oax03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABWI01_12905
MMR (mismatch excision repair)
Other MMR factors
ABWI01_12905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
XHC20056
LinkDB
All DBs
Position
complement(2668668..2670968)
Genome browser
AA seq
766 aa
AA seq
DB search
MSSVPLSQQAAPRAPRADAAYLDGLNPEQRAAVEAIDGAVLVLAGAGTGKTRVLTTRLAH
ILATGKAQPWNILSVTFTNKAAREMKDRVGKIIGEQVEGLPWLGTFHSIAAQILRRHAEL
VGLKSSFTILDTDDQLRLLKQILEAEGIDTKRWTPRHLASLIDGWKNRAQTPERIPEEDK
WSFADGKAQKLYKLYQDRLSVLNACDFGDLLLHNITIFQTQDDVLAEYHKKFRYLLVDEY
QDTNVAQYLWLRLLARGSGNVCCVGDDDQSIYGWRGAEVDNILRFEQDFPGATVIRLERN
YRSTGHILGAAAGLITANKARLGKTLWTEDDPGQKVQVSGLWDGEAEARFVADEIEGHVR
SGGQHSDIAVLVRASWQMRAFEDRFIMLGLPYKVIGGPRFFERAEIRDALAYLRLVRSLD
DDLAFERVVNTPKRGVGDTSVQKIAMAARGAEVSMAAAARLMTQTDEIRGKGRTGLIAFL
RDLDRWAEQSQTMRHDELAEVILDESGYTAMWREDKSPQAAGRLDNLKELVRSMGEFDSL
EAFLEHIALVSDADRTEDGDEVSIMTLHAAKGLEFPLVFLPGWEETVFPSQRSMDEGGTA
ALEEERRLAYVGITRARQRAIISFTANRMIFGRWQSVLPSRFIDEMPHEHCEAQSETGYY
DAGPGFEGVAESADPFKSSYESPGWKRFQASKASGRRPDPGVIEGQATLLDTSSVGGTSK
WKPGDRVFHQKFGYGTVKTADGAKLSVAFDKAGLKKVVASFVEAAP
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcagttcccctttcccagcaggcggccccgcgggcgccgcgcgccgacgccgcc
tatctggacgggctgaaccccgaacagcgcgccgcagtcgaggcgattgacggcgccgtc
ttggtgctggcaggcgcgggcacgggcaagacgcgggttctgaccacccggctggcgcat
attctggcgaccggcaaggcgcagccctggaacatcctgtcggtgaccttcaccaacaag
gccgcccgcgagatgaaagaccgcgtgggcaaaatcatcggcgaacaggtcgaaggcctg
ccctggctggggactttccactccatcgccgcgcagatcctgcgccgccatgccgagctg
gtgggcctgaaatcaagcttcaccattctcgacaccgatgaccagctacggcttctcaaa
cagatccttgaagccgagggcattgataccaaacgctggacgccgcgccatctggccagc
ctgatcgacggctggaagaaccgcgcccagacgcccgagcgtattcccgaagaggacaaa
tggagcttcgcggacggcaaggcgcaaaaactctacaaactctatcaggaccgcttgagc
gttttgaacgcgtgtgatttcggcgatcttctgctgcacaacatcaccatcttccagacc
caggacgatgtgctggcggagtatcacaagaagttccgctatcttctggtggacgaatac
caggacaccaatgtcgcccagtatctctggctgcggcttctggcgcgcggctcgggcaat
gtgtgctgcgtgggtgatgatgatcagtcgatctatggctggcgcggcgcggaagtggac
aacatcctgcgctttgaacaggactttcccggcgcgacagtcattcgcctcgagcgcaat
taccgctcgacgggccatatcctcggcgcagcggccgggctgatcaccgccaacaaggcg
cggcttggaaagaccctgtggaccgaggatgatcccggccagaaagttcaggtgtccggg
ctttgggacggcgaggccgaagcgcgctttgtcgctgacgagatcgaaggccatgtgcgc
tcgggcggccagcattcagacatcgccgtgctggtgcgggcctcctggcagatgcgagcg
tttgaagaccggttcatcatgctgggcctgccttacaaggtgattggcggaccgcgcttt
ttcgagcgcgccgagatccgcgacgccctcgcctatttgcggctggtgcgcagcctggat
gatgatctggcgtttgagcgcgtggtgaacaccccgaaacgcggggtgggcgacacgtcg
gttcagaagatcgccatggccgcccgcggcgccgaagtgtccatggccgccgccgcaagg
ctgatgacccagactgacgagataaggggcaagggccgcaccgggctgatcgcttttctg
cgcgatctggatcgctgggccgagcagtcgcagaccatgcgtcatgacgagctggctgaa
gtcatcctcgatgaaagcggctatacggccatgtggcgcgaggacaagagccctcaggcc
gcaggccggctcgacaacctcaaggaactcgtccgctccatgggcgagtttgacagcctg
gaagccttcctcgaacacatcgcgctcgtctctgacgcggatcgtaccgaggatggcgac
gaggtctccatcatgacgctgcatgcggccaagggcctcgagttcccgctcgtcttcctg
ccgggctgggaagaaaccgtcttcccctctcaacgctcaatggatgaaggcggcacggcg
gccttggaagaagaacgccgcctcgcctatgtgggcatcacccgcgcgcgccaacgcgcc
atcataagcttcaccgccaaccggatgatcttcggccgctggcaatcggtgctgccgtcg
cgcttcatcgacgaaatgccgcatgagcattgcgaagcgcagtcagagaccggctattat
gacgccgggccgggatttgaaggcgtggcggaaagcgccgaccccttcaaatccagttat
gagagccccggctggaaacgcttccaagccagcaaggcctcgggccgccgccccgatccc
ggcgtcattgaaggccaggccaccttgctcgacaccagctcggtgggcggaacctccaaa
tggaagcccggcgaccgcgtcttccaccagaaattcggctatggcacggtgaaaaccgcc
gacggcgccaagctcagcgtggcgttcgacaaggcgggcctgaagaaagtggtggcgagc
tttgtggaagcggcgccttag
DBGET
integrated database retrieval system
