Oceanicaulis alexandrii: ABWI01_14020
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Entry
ABWI01_14020 CDS
T10771
Symbol
serS
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
oax Oceanicaulis alexandrii
Pathway
oax00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oax00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ABWI01_14020 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oax01007
]
ABWI01_14020 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oax03016
]
ABWI01_14020 (serS)
Enzymes [BR:
oax01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ABWI01_14020 (serS)
Amino acid related enzymes [BR:
oax01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ABWI01_14020 (serS)
Transfer RNA biogenesis [BR:
oax03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ABWI01_14020 (serS)
Prokaryotic type
ABWI01_14020 (serS)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Uds1
Wbp11
DUF6779
DUF2203
HALZ
CLZ
Motif
Other DBs
NCBI-ProteinID:
XHC20270
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All DBs
Position
2892231..2893505
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AA seq
424 aa
AA seq
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MHDIRLIRDEPAAFDAAMALRGVEPQAQRLIDLDARRREATSRLQEIETERNSKSKEIGK
AKAQGDEDRFNALRSEVESLKSEMERLTEEARTAEEVLNQHLAALPNRPADDVPEGKDES
ENEEVRGWGEPREFEFEPADHVTVGERLGLDFERAAAMSGARFAVLQGPLARLERALGQF
MLDLQTTENGYRETSVPYMVRDEALFGTGQLPKFAEDLFRTTDDRWLIPTAEVPLTNLVR
DSIHAEASFPIRTTALTPCFRSEAGSAGRDTRGLIRMHQFLKVELVSITTPEQSEEELER
MTQCAEMVLRRLELPYRVMKLCTGDMGFSARRTYDLEVWMPSQDTYREISSCSTCGDFQA
RRMNARYRKEGEKKPDFLHTLNGSGLAVGRALVAILENHQQADGSVRIPEALQPYMGGVE
AIQP
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacatccgtctgatccgcgatgagccggcggctttcgacgccgccatggccctg
cgcggcgtggagccgcaagcccagcgcctgattgatctggacgcgcgccgccgtgaagcg
acctcgcgccttcaggagatcgagaccgagcgcaactcaaagtccaaggaaatcggcaag
gcgaaagcccagggcgatgaagatcgcttcaacgcgctgcgctccgaggtggagagcctc
aaatcggaaatggagcgcctgaccgaagaggcgcgcaccgccgaggaagtgctcaaccag
cacctcgccgcgctgcccaaccgccccgctgacgacgtgcccgagggcaaagacgagagc
gagaacgaggaagtgcgcggctggggcgagcctcgcgaatttgagtttgaacctgccgac
catgtgaccgtgggcgagcgcttggggcttgatttcgagcgcgccgccgcgatgtccggc
gcgcgctttgcggtgctgcaaggcccgctggcgcggctggagcgggcgctgggtcagttc
atgctcgaccttcagacgactgagaacggctatcgcgaaacgtccgtgccttacatggtg
cgcgatgaagcgttgttcggcacgggccagctgcccaaattcgccgaagacctgtttcgc
accaccgatgatcgctggctgatcccgacggccgaagtgccgctgaccaatctggtgcgc
gattccattcacgcggaagccagcttcccgatccgcacgacggcgctgacgccatgcttc
cgctcggaagcgggctcggcagggcgcgatacgcgcggcctgatccgcatgcaccagttc
ctgaaagtcgagctggtgtcgatcacgacccccgagcagtcagaagaagagctcgagcgc
atgacccagtgcgcggagatggtgctgcgccgcctggagctgccctatcgggtgatgaag
ctttgcaccggcgatatgggcttctcggcgcgccgcacctacgaccttgaggtctggatg
cccagccaggatacctatcgcgagatcagctcgtgctcgacctgcggcgatttccaggcg
cgccgcatgaatgcgcgctaccgtaaagagggcgagaagaagcctgacttcctgcatacg
ctcaatggctcgggcctggcggtgggccgggcgctggttgcgatccttgaaaaccatcag
caggccgacggctccgtgcgcattcccgaggcgctgcagccctatatgggcggcgttgag
gcgatccagccatga
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