Congregicoccus parvus: ASA1KI_01760
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Entry
ASA1KI_01760 CDS
T10563
Name
(GenBank) hypothetical protein
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
oba Congregicoccus parvus
Pathway
oba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASA1KI_01760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oba03019
]
ASA1KI_01760
03009 Ribosome biogenesis [BR:
oba03009
]
ASA1KI_01760
Enzymes [BR:
oba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ASA1KI_01760
Messenger RNA biogenesis [BR:
oba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASA1KI_01760
Ribosome biogenesis [BR:
oba03009
]
Prokaryotic type
rRNA helicases
ASA1KI_01760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
BET65258
LinkDB
All DBs
Position
complement(213912..215819)
Genome browser
AA seq
635 aa
AA seq
DB search
MDKLRFAELGLSPEVLKAVDKMGFEEASPIQTAAIPVILSGRDVVGQSSTGSGKTVAFAI
PAVERVDPKKRAVQALVLCPTRELALQVAEEVAKLASFKRGVMEVPIFGGQSYERQFRAL
AAGAQIVIGTPGRVIDHIERGTLKLDALQMLVLDEADRMLDMGFREDIERVVAATPAGRQ
LLFFSATMPRVIQEMIRRSAKDPAWVKVETHAQNAPKVDQVYYEIDRRSKLEVLTRLIDL
HDFRYGIVFCATKLAVDELDEHLHARGYAVDRLHGDITQAQRTRVMEKFKRRGFEFLIAT
DVAARGLDVDDLEVVFNFDLPNDAEDYTHRIGRTGRAGRSGRAITFVSGRELYHLQSMIR
YARLNIRRERVPSLDQVEEARENQFFERLRAVLDGGRFRKHDRMLDRLLDQGYQSTDIAS
ALIHLLQGGAVEGPDDASVPPPPAQAPAPAATQPVAPAPIAVSASTPVERPRPKTTTAPE
RAPEHEPAAATASKPERAVSRKGGYTPPPWTEAGRAAASVVGDAEEDAGSAAAKKVRNDR
PGRTGKQKGFTPLFFNVGRKQLVSPADIVGKIAGVTRQPASIVGAIDLHQRHAIVDVADA
AVQTVCAKLSGIRMKGQVLLVTLASETPAAGSDET
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atggacaagttgcgtttcgccgagttggggctgtcgcccgaggtgttgaaggccgtcgac
aagatgggtttcgaagaggcttcgcccatccagacggcggcgatcccggtcattctttcg
ggccgcgacgtcgtcggtcagtcttcgacgggttcgggcaagacggtggcgttcgcgatc
ccggcagtggagagagtggatcccaagaaacgggccgtgcaggcgctcgtcctgtgcccg
acgcgcgagttggcgctgcaggtggcggaggaggtggcgaaactggcgtcgttcaagcgc
ggcgtgatggaggtgccgatcttcggcgggcagtcttacgagaggcagtttcgcgccctt
gcggccggagcgcagatcgtgatcggcacacccgggcgcgtgatcgatcacatcgagcgc
gggacgttgaagttggacgcgctgcagatgctcgtgctcgacgaggcggatcggatgctc
gacatgggtttccgggaagacatcgagcgcgtcgtcgcggcgacgccggcagggcggcag
ttgttgttcttctcggctaccatgccgcgcgtgatccaagagatgatccggcgctccgcg
aaggatccggcgtgggtgaaggtggagacccacgcgcagaacgcgcccaaggtggatcag
gtgtattacgagatcgaccggcgttcgaagttggaggtgctcacgcgcctgatcgatctg
cacgacttccgttacggaatcgtcttttgcgcgaccaagctcgcggtggacgaactcgac
gaacacctgcacgcgcgtggttacgcggtggatcgtctgcacggcgacatcacgcaggcg
cagcgcacgcgcgtgatggagaagttcaagcggcgcggtttcgagtttctgatcgccacg
gacgtggcggcgcgcgggctcgacgtggacgacctggaggtggtcttcaatttcgatcta
cccaacgacgcggaggactacacgcaccgcatcgggcggaccggccgggccgggcgttca
gggcgggcgatcacattcgtctcgggtcgcgagttgtatcacctgcagtcgatgatccgc
tacgcccggctcaacatccggcgcgagcgggtgccgtcgctcgatcaggtcgaggaggcg
cgggagaatcagttcttcgagcggttgcgcgccgtgctcgacgggggacgcttccgcaag
cacgaccgcatgctcgatcgtttgctcgatcaaggttaccagagcaccgacatcgcttcg
gcgttgatccatctcctgcaaggcggcgcggtcgagggtccggacgacgcgtcggttccg
cctccgccggcacaggctccggcaccagcagctacgcagccggtggcacctgctccgatt
gccgtttccgcttcgactccggtcgagcgaccgaggccgaagacgacgactgcgccggag
cgcgcacccgaacacgagcccgccgccgcaaccgcgtcgaagcccgagagggcggtgtcg
cgaaaaggtggatacacgccgccgccgtggacggaggccggtcgggcggctgcgagcgtc
gtcggcgacgcggaggaggacgccgggtcggccgcggcgaagaaggtgcgcaacgatcga
ccggggcgcaccggcaagcagaagggtttcacgccgttgttcttcaacgtgggacgcaag
cagctcgtctctccggccgacatcgtgggcaagatcgcgggcgtcacgcgtcagccggcg
agcatcgtgggcgcgatcgatctgcaccagcggcatgcgatcgtcgacgtggccgacgcg
gcggtgcagaccgtttgcgcgaaactctccggcatacggatgaagggacaggtgctcctc
gtgacgttggcgagcgaaacgcctgcggccgggtcggacgagacgtga
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