Congregicoccus parvus: ASA1KI_08630
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Entry
ASA1KI_08630 CDS
T10563
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
oba Congregicoccus parvus
Brite
KEGG Orthology (KO) [BR:
oba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oba03016
]
ASA1KI_08630
Enzymes [BR:
oba01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
ASA1KI_08630
Transfer RNA biogenesis [BR:
oba03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
ASA1KI_08630
Prokaryotic type
tRNA splicing ligases
ASA1KI_08630
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
BET65945
LinkDB
All DBs
Position
complement(1101433..1102617)
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AA seq
394 aa
AA seq
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MSERATPAPWRQWGTDIDAESIRQMENACMLPVAVRGALMPDAHVGYGLPIGGVLATDSA
VVPYAVGVDIACRMKLTVLDLDLDWLQRKQEWLRRAIEDETRFGIGASFKHPRTHAVMDD
DWTVSRVTRVNKDKAWSQLGTSGSGNHFVEFGELILDAPAPELRLAPGRYLALLTHSGSR
GTGAAVCDHYSKVARARHPDLPKQLAYLAWLDLDSADGREYWAAMELMGRYAAANHALIH
KHIAKHLGAHVLADIENHHNFAWKEWHLGRELVVHRKGATPAGLGALGIIPGSMATPGFV
VRGKGAPDSLHSASHGAGRVMSRKKATETFNWKHARTVLEERGVTLISAGLDEVPMVYKD
IRAVMAAQSDLVEVLARFEPRLVKMAPGGERAED
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacgcgcgacaccggccccgtggagacaatggggcaccgacatcgacgccgaa
tccatccggcaaatggaaaacgcctgtatgctgcccgtggccgtgcgcggtgcgctcatg
cccgatgcccacgttggttacggcctgccgatcggtggcgtgctcgccaccgacagcgca
gtcgtcccctacgccgtcggggtcgacatcgcttgccggatgaagctcaccgtgctcgac
ctcgacttggactggctccagcgcaaacaggaatggttgcgacgcgcgatcgaggacgag
acacgcttcggcatcggtgcctcgttcaagcacccgcgcacccacgccgtgatggacgac
gactggacggtgagtcgcgtcacccgagtcaacaaggacaaggcgtggtcccaactcggg
accagcggcagcggcaaccatttcgtggaattcggagaactgatcctggacgcgcccgct
ccggaactccgactcgcaccgggccgctacctggcactactcacccacagcggcagtcgc
ggcaccggggctgccgtgtgcgatcactacagcaaagtcgcccgcgctcgccatccggac
ctacccaaacaactcgcataccttgcttggctcgacctcgactccgccgacggcagggaa
tactgggccgcgatggagttgatgggccggtacgccgccgccaaccacgctctcatccac
aagcacatcgcgaagcacctcggcgcgcatgtgctcgccgacatcgaaaaccatcacaac
ttcgcgtggaaggagtggcatctcggtcgcgagctcgtcgtccaccgcaaaggtgccacg
cccgccggtctcggcgcgctcggcatcatcccgggctccatggcgactccgggcttcgtc
gtgcgtgggaagggcgcacccgactccctccactccgcctcgcacggtgcaggtcgcgtc
atgagtcggaaaaaggccaccgagacgttcaattggaaacacgcccggaccgtgctcgag
gaacgcggcgtaacgctgatctccgccgggctcgacgaggtcccgatggtctacaaagac
atccgtgccgtgatggccgcgcagtcggatctggtcgaagttctcgctcgtttcgaaccc
cgcctggtcaagatggcaccgggtggtgaacgcgcggaggactga
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