Congregicoccus parvus: ASA1KI_25990
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Entry
ASA1KI_25990 CDS
T10563
Symbol
hrpB
Name
(GenBank) ATP-dependent helicase HrpB
KO
K03579
ATP-dependent RNA helicase HrpB [EC:
5.6.2.6
]
Organism
oba Congregicoccus parvus
Brite
KEGG Orthology (KO) [BR:
oba00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oba03019
]
ASA1KI_25990 (hrpB)
Enzymes [BR:
oba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ASA1KI_25990 (hrpB)
Messenger RNA biogenesis [BR:
oba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ASA1KI_25990 (hrpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HrpB_C
Helicase_C
DEAD
HA2_C
HA2_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BET67681
LinkDB
All DBs
Position
3283927..3286419
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AA seq
830 aa
AA seq
DB search
MHGRVLVQAPTGSGKSTQIPQIALDEGLAADGEIVVLQPRRLAARMLARRVASERGVPLG
GEVGYQVRLESRVSAETRIRFVTEGILLRRMVSDPSLRGVGMVIFDEFHERHLHGDITLG
RALQLQRASRPDLRIVVMSATLQVSGLSGYLAPCAQVVSQGRTFPVRVRYVEKPLDFEKS
PVWDVAAEAAAALAAEIPDGDVLVFMPGAYEIARTCEALRHRLGARDFDVLPLHGELTTA
EQDRAVDESGRRKVIVATNVAETSLTIPGVRAVVDSGLARMARFDPNRGIDTLLIEKISQ
ASAEQRAGRAGRTAPGVCVRLWTEREHGNRASAETPEVKRMDLAEVVLTLKAAGVVDVAG
FPWLDAPDPKALLRAETLLADLGALDGRSLEITSAGRRMLRFPLHPRYARMLVEAGERGC
VAEAAAIAAITQGRPLLVRNVDRRIEEARERTFGEERVSDLFLALDGWRYAERTGFSVEE
CRRVGVHVQAARQVRSLAEQFVRIAREGGIDAAPLGEQRGEREALVRCVLAGFADHVAKR
LDRGTLRCELVHGRRGMLARDSVVQDAALFVAGEVSEIGGRSGEVTTLLGLCTRVDAALL
EEVFPGSVREEHTAELDPVAKRVSARRRVVFRDLVLEDREAGEATSDAAVRILLREVKEG
RLAIERWDETVELWMARVNLLARLFPEFEIAPISEDDRWVILEQVVHGARTLREVRERDP
WPTLRGWLSPEQLAALDRLLPERMEMANGRKARVTYAKDGTATLSARIQELYGVDRNVVI
AQGRLPVRIEVLAPNQRPIQVTDDLSRFWKETYPEIKHALSRRYPRHEWR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atgcacggtcgggtcctcgtgcaggcaccgacggggtcgggcaagtcgacgcagatccca
cagatcgcattggacgaaggcttggcggccgacggcgaaatagtcgtgctgcagcctcgc
cgtttggcggcgcgaatgttggctcggcgcgtcgcttcggagcgcggggtgccgctcggt
ggcgaagtgggttaccaagtgcgcttggagtcgcgggtgtcggcggagacgcggatccga
ttcgtgacggaaggcatcctgttgcggcggatggtatccgatccgtcactacgcggcgtc
ggtatggtgatcttcgacgagtttcacgagcgtcatctgcacggcgacatcacgctgggc
cgtgcgttgcagctgcagcgtgcttcgcgacccgacctgcggatcgtcgtgatgtcggcg
acgctgcaggtgtcgggactttccggatacttggcgccgtgtgcgcaggtcgtctcgcaa
gggcggacgtttccggtgcgagttcgctacgtcgagaagcctttggacttcgagaagtcg
ccggtttgggacgtggcagcggaggctgccgcggctctggccgccgagatacccgacggc
gacgtgttggtcttcatgcccggcgcgtacgagattgcgcgcacgtgcgaggcactgcga
catcgtctcggggcgagagatttcgatgtgctgcccctgcacggcgagttgacgaccgcg
gaacaggatcgagcggtcgacgaatcgggtcggcgcaaggtgatcgttgcgaccaacgtg
gcggaaacctcgctcacgattccgggcgtgcgtgcggtcgtcgattccggtctggcgcgg
atggcgcgcttcgatccgaaccgcgggatcgacacattgctgatcgagaagatcagtcag
gcgtccgcggagcaacgagccgggcgcgccggccggacggcgccgggcgtgtgtgtgcgc
ctctggacggagcgcgagcacgggaatcgcgcgtcggcggagacgcccgaggtcaagcgg
atggatctggcggaagtggtgctgacgctcaaggcggccggcgtggtggacgtggcgggt
ttcccgtggctggacgcgccggacccgaaagcgctgttgcgcgcggaaacgttgctcgca
gacctcggcgcgctggacggacgttccctcgagatcacgtcggcggggcgtcgcatgcta
cggtttcctctgcacccacgctacgcgcggatgctcgtcgaagcgggcgagcgcgggtgc
gtggccgaagcggctgcgatcgcggcgatcacgcaaggtagaccgttgctcgtgcgcaac
gtggaccgccggatcgaggaagcgcgcgagcggacgttcggagaggaacgcgtttccgat
ctgtttctggctttggacggttggcggtatgcggagaggacgggtttctcggtcgaggag
tgcaggcgcgtcggggtgcacgtccaagctgcgcgtcaggtgcgatcgctggcggagcag
ttcgtgcgtatcgcgcgcgagggtggaatcgacgcggccccgcttggcgagcagcgcggc
gagcgcgaggctctggtgcggtgtgttctcgcgggattcgccgatcacgtggcgaaacga
ctggaccgcggcacgctgcgttgcgagctcgtgcacggtcggcggggcatgctcgcacgc
gacagcgtggtgcaggacgcggcgttgttcgtcgcgggcgaggtgagcgagatcggaggg
cgtagtggcgaagtcactacgcttctggggctctgcacgagggtggatgccgcgttgttg
gaggaggtgtttcccggctcggtgcgcgaggaacacacggcggagttggatccggtggcg
aagcgggtctcggctcgtcgacgcgtggtgtttcgagacctcgtgttggaggatcgcgag
gcgggcgaggcgacttcggacgcggcggtgcgaatcttgttgcgagaggtgaaggaaggg
cgtctggcgatcgagcgctgggacgagaccgtcgagctctggatggcgcgcgtgaacctg
ctcgcgcgtctgtttccggagttcgagatcgcgccgatctcggaggatgaccggtgggtg
atcctcgagcaggtcgtgcatggagcgcggactcttcgtgaagtgcgcgagcgcgatccg
tggccgacgttgcgggggtggttgtcgcccgaacaactcgcggcgctcgatcgtctcttg
ccggagcgcatggagatggcgaacgggcgcaaggctcgcgtcacctacgccaaggacggc
actgcgacgctgtcggcgcgtatccaagaactctacggagtcgatcgaaacgtcgtgatc
gcgcagggccggttgccggtgcgcatcgaggtgctcgcaccgaatcagcgaccgatccag
gtgaccgacgatctttcgaggttctggaaggagacgtatccggaaatcaagcacgcgctc
tcgcggcggtatccgcgccacgagtggcggtga
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