Congregicoccus parvus: ASA1KI_36730
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Entry
ASA1KI_36730 CDS
T10563
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
oba Congregicoccus parvus
Pathway
oba03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oba00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASA1KI_36730 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oba03019
]
ASA1KI_36730 (rnr)
03016 Transfer RNA biogenesis [BR:
oba03016
]
ASA1KI_36730 (rnr)
Enzymes [BR:
oba01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ASA1KI_36730 (rnr)
Messenger RNA biogenesis [BR:
oba03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ASA1KI_36730 (rnr)
Transfer RNA biogenesis [BR:
oba03016
]
Prokaryotic type
tRNA degradation factors
ASA1KI_36730 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
S1
OB_Dis3
OB_RNB
OB_HELZ2
Motif
Other DBs
NCBI-ProteinID:
BET68755
LinkDB
All DBs
Position
4611748..4614084
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AA seq
778 aa
AA seq
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MTLRDRILSRMRRADYVPEPSSVLLARLGLKRRERNRLEQELGTLESEGAIVRVKRDRYC
IPADADLVTGRIHFKQSGSAVLVPEAVAGQPEREPVDVAAEDTGVALHGDRVVVRLSDRR
RRKPERQRAGRPLPARADGRVIRILERASDTITGNLQRSRNFFVVAPDDPRIVHDIYVPD
PATMSVRPIPKVGDKAVVKLLAWEHRHVAPEGEIVGVLGRTHEPQAELKAILHKFRLEPE
FPEAVQREVARLPDAVRSADRKHRVDIRDVPTITIDPDDAKDFDDALSLEEFAGGDVRIG
IHIADVPAYVRPDTALDREAQKRGNSTYLVGVVVPMLPHALSSGVCSLKEGVERLTKSVF
LVFGRNGRVRETSFANTVIRSDKRLTYKQAYALLKEDDPAKIRRLPPPPAHQTGFAGRPL
SELSNSEIDRLRDMVRRFWSFASRLRQERMKRGSLDLDMPETKIFVDEEGYADRLEKITH
DESHQLIEEFMLAANEAVARALREAGLPCVYRVHDDPEEDRLDELREFLATFGVETGDLS
QRPELVRLLARLRDHPQGHLLRTQVLRSLKKACYRATPDGHFGLHKRDYLHFTSPIRRYA
DLIVHRVFAHHLAANLGQPMLPGAKADYTKSRIASLAEHISLTEVNSTDAERESVKVKLL
EFFERELRKKEPTRFAAVITETRNHGMFVELVESMAFGLVHVSALTDDLYLLSGDGTALV
GRRTKRAFEVGAKIEVCVARVDRFKRQIDFRLAGESGGPTRHPRRKGPRKDRERRRGK
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaccctgcgcgaccggattctctctcgcatgcggcgcgcggactacgttcccgaaccg
tcgtccgtccttctcgcccgcctcggcctgaaacgccgagagcgcaatcgcctcgagcag
gagctcggcacgctcgagtccgaaggagcgatcgtccgagtgaaacgagatcgctactgc
atcccagcggacgccgacctcgtgaccggtcgcatccacttcaagcagagcggttcggcc
gtgctcgtccccgaggccgtcgccggacagcccgagcgcgagcctgtcgacgtcgccgcc
gaggacaccggggtcgccctgcacggcgaccgcgtggtcgtgcgtctctcggaccgccgt
cgccgcaaacccgaacggcagcgcgccggacgccctttgcccgctcgcgccgacggtcgc
gtgatccgcatcctcgaacgcgcatcggacacgatcaccgggaatctccaacgctctcgc
aatttcttcgtcgtcgctcccgacgatccgcgaatcgtgcacgacatctacgtgcccgac
ccggccacgatgtcggtccggccgattccgaaagtcggcgacaaagcggtggtgaaactc
ctcgcttgggagcaccgacacgtcgcaccggagggcgaaatcgtcggcgtgctcggccgc
acccacgaacctcaggccgagctgaaggccatcctccacaagttccgcctcgaaccggag
tttcccgaggccgtgcagcgcgaggtcgcgagacttccggatgcagtccgttccgccgac
cgcaagcaccgcgtcgacatccgggacgtgccgaccatcacgatcgacccggacgacgcc
aaggacttcgacgacgccctttccctcgaagaattcgccggtggcgatgtgcgcatcggc
atccacatcgccgacgtgcccgcctacgtccgccccgacaccgctctcgatcgagaggcg
caaaaacgaggaaactccacctacctcgtgggcgtggtcgtgcccatgcttccgcatgcc
ctctccagcggcgtgtgcagcttgaaggaaggcgtggaacggctgaccaagagcgtgttt
ctcgtcttcggtcgcaacggtcgcgtccgcgaaacgtcgttcgccaacaccgtcattcgc
agcgacaaacgcctcacctacaagcaggcctacgcgctgctgaaggaggacgaccccgcg
aagattcgaaggcttcctccaccgcccgcccaccagaccggattcgcgggtcgccccctc
tccgagctgtcgaactcggagatcgatcggcttcgcgacatggtccggcgtttttggtcg
ttcgcgtcgcgcttgcgacaggagcggatgaaacgcggctcgctcgatctcgacatgccg
gagacgaagatcttcgtcgacgaagagggctacgccgatcgcctcgagaagatcacgcac
gacgagagccaccaactcatcgaagagttcatgctcgccgccaacgaagccgtcgcgcgc
gcgctccgcgaagccggcttgccgtgcgtctatcgcgtccacgacgaccccgaggaggac
cgtctcgacgaactgcgcgagtttctcgccaccttcggagtcgagaccggcgatctgtcg
caacgccccgaactcgtccgcctcctcgcgcggctgcgcgaccatccgcagggccatctc
ttgcgcacccaagtactgcgcagcctgaagaaggcctgttaccgagccacacccgacggc
cacttcggcctgcacaagcgcgactacctgcacttcacgtctccaattcgtcgatacgcc
gacctgatcgtccaccgcgtcttcgcccaccacctcgccgcgaatctcggccagccgatg
ctgccgggagcgaaagccgattacaccaagagccgcatcgcgtcgctcgccgaacacatc
agcctcaccgaggtgaacagcaccgacgccgaacgcgaaagcgtgaaggtgaaattgctc
gagttcttcgaacgcgagctgcgcaagaaggaaccgacccgcttcgccgccgtgatcacc
gagacccgcaatcacggcatgttcgtggaactggtcgagtccatggcgttcgggctggtg
cacgtgtcggcgctcacggacgatctgtatttgctttctggagacggcacggccctcgtc
ggacgcaggacgaaacgcgcgttcgaagtcggcgcgaagatcgaggtctgcgtcgcccgc
gtggaccgtttcaagcgccagatcgacttccggctcgcgggcgaaagcggaggtccgacc
cgacacccgcgacgaaaaggcccgcgcaaagaccgcgaacgtcgccgcgggaaatga
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