Congregicoccus parvus: ASA1KI_41970
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Entry
ASA1KI_41970 CDS
T10563
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
oba Congregicoccus parvus
Pathway
oba03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
oba00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ASA1KI_41970 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oba03021
]
ASA1KI_41970 (rpoA)
03400 DNA repair and recombination proteins [BR:
oba03400
]
ASA1KI_41970 (rpoA)
Enzymes [BR:
oba01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ASA1KI_41970 (rpoA)
Transcription machinery [BR:
oba03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ASA1KI_41970 (rpoA)
DNA repair and recombination proteins [BR:
oba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ASA1KI_41970 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
BET69279
LinkDB
All DBs
Position
complement(5280126..5281127)
Genome browser
AA seq
333 aa
AA seq
DB search
MPKRLGKFELPSRLMKVEEGATPTYAKFIAEPFEAGYGHTIGNSLRRVLLSSIEGAAISS
VRIDGVNHEFQSIDGVVEDVTDIVLNLKKVLLVSHARDTVRLRLSVNREGAVTAADIEPD
SNIQVINPDQLICTLDKPVHFSAEIEIRTGRGYCPGEENKKEDQPIGVIPIDSLFSPVRL
VKYAVENTRVGQITDYDKLLLEVWTDGRITPEDALKQAGAILKHHLDVFDRVSEETYDFD
DQGSEVSEEQNKLRKLLNMSVNEIELSVRAANCLNNANITTVGELAMKTEQEMLKYRNFG
KKSLNEIKDKLEALGLSLGMKFDERLLEMKKEV
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgccttggcaaattcgaacttcccagccgtctcatgaaggtggaggagggt
gctacacccacctacgccaagttcatcgccgagcctttcgaggccggttacggacacacg
atcggcaactcgctgcgccgcgtcttgctcagctcgatcgaaggtgccgccatctcttcg
gtgcgcatcgacggagtgaaccacgagttccagagtatcgacggcgtggtcgaggacgtg
acggacatcgtcctcaatctcaagaaggtgttgttggtgtcgcacgctcgcgacacggtg
cggcttcgtctcagcgtgaaccgcgaaggtgcggtgacggcagccgacatcgagcccgat
tcgaacattcaggtcatcaacccggatcagttgatctgcacgctcgacaagccggttcac
ttctcggcggaaatcgaaattcgtactggtcgcggctactgccccggcgaggagaacaag
aaggaggatcagccgatcggggtgatcccgatcgactcgcttttcagccctgtgcgcctc
gtgaagtatgcggtggaaaacacgcgtgttggtcagatcaccgattacgacaagttgctg
ctggaggtctggacggacggacgcatcacgcccgaggatgcgctcaagcaggccggcgcg
attctcaagcaccatctcgatgttttcgatcgcgtttcggaagagacttacgacttcgac
gaccaaggctccgaagtcagcgaagagcagaacaaactgcgcaaactgctgaacatgtcg
gtgaacgagatcgaactctcggtgcgcgccgccaactgcctcaacaacgcgaacatcacc
accgtgggcgagttggcgatgaagaccgagcaggagatgctcaagtaccggaatttcggc
aagaagtcgctcaacgagatcaaggacaagttggaggctctcggcctttcgctcggcatg
aagttcgacgagcgtctcttggagatgaagaaagaggtctga
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