Osmia bicornis bicornis (red mason bee): 114871194
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Entry
114871194 CDS
T06109
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03022
Basal transcription factors
obb03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
114871194
09124 Replication and repair
03420 Nucleotide excision repair
114871194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obb03021
]
114871194
03400 DNA repair and recombination proteins [BR:
obb03400
]
114871194
Enzymes [BR:
obb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
114871194
Transcription machinery [BR:
obb03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
114871194
DNA repair and recombination proteins [BR:
obb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
114871194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
114871194
NCBI-ProteinID:
XP_029032634
LinkDB
All DBs
Position
Unknown
AA seq
789 aa
AA seq
DB search
MGPPKRFKKDNDRGKWKKRKEDLEEFNDDDSLDDNEASGIPDAAKNDVEKQDETALEDEF
GAKDYRSQMVLKPDCASRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEY
KLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPDGIIKFIKLCTLSYGKVKLVLKHNKYF
VESPYPEVLQKLLKDPKIQECRLKKSVENEKEEIITNVQSKTKVLQFGAKAMTNVPPGTT
KITETSNDQVPAETATVPEDISTFYDKMDKEDEEEEEEQELKTVSFEVNQEKIEVIQKRC
IELEHPLLAEYDFRNDSVNPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGA
GKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCE
ILITTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKL
GLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLG
CKMSKKLLLYVMNPNKFRCCQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPT
SQSERIQILQNFKFNTKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRIL
RAKKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMDEEPDLMY
TSREEQGHLLQQVLSASDMDADEERIPGEGPRPIIRKAGNMTSMSGADDAVYSEYKKANK
HPLFKKFRA
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctcctaaacgttttaaaaaagataatgataggggtaaatggaaaaaacgaaaa
gaagatcttgaagaattcaatgatgatgattccttagatgataatgaagcatcaggtatt
cctgatgcagcgaaaaatgatgtcgagaaacaagatgaaactgcattggaagatgaattt
ggcgcaaaggattatcgttcacaaatggttctgaaacctgattgtgcttcaagacctctt
tgggtggcaccaaatggacatatctttttagaatccttttcaccagtatataaacatgct
catgatttcttaattgctatctcagaacctgtatgccggccagaacatattcatgagtac
aaactaactgcttattcattatatgctgctgttagcgttggtcttcaaacacatgacata
atagaatatttaaaaagacttagtaaaactagtattcctgatggtattataaaatttatt
aaattatgtacattatcgtatggcaaggtaaaactggtattgaagcataataaatatttt
gttgaatctccatatccagaagtattacaaaagttattaaaggatccaaagatacaagaa
tgtagattaaaaaagagtgtagaaaatgagaaagaggaaataattacaaatgttcaaagt
aaaacaaaagttctacagtttggggcaaaagcaatgaccaatgttccacctggaactacc
aaaataactgaaacatctaatgatcaagttccagcagaaacagcaactgttcccgaagat
atatctactttctatgacaaaatggataaagaggatgaagaggaagaagaagaacaagaa
ttaaaaacagtcagttttgaagtaaatcaggaaaaaattgaagttatacaaaagagatgt
atagagttagaacatccattgttagcagaatatgatttccgcaatgatagtgtaaatcct
gatatcaatattgatttaaaaccatcagctgtattaagaccatatcaggagaagagttta
agaaaaatgtttggtaatggacgtgccagatctggtgttatagtattaccttgtggtgcc
ggtaaaagtttagtaggagtgacagcttgttgtacagttcggaaacgtgcattggtatta
tgtaattccggagtgtcggtagaacaatggaaacaacaatttaaaatgtggtcgaccgcg
gacgattcgatgatatgccgatttacaagcgaagctaaagacaaacccatgggctgtgaa
attttaatcactacatactctatgattacgcatacacaaaagcgttcatgggaagctgaa
caaactatgcgatggcttcaagaacaagaatggggaataatggttttggatgaggtccac
acaattccagcaaaaatgttcagaagggtcttaactattgttcagtctcattgtaaattg
ggtttgaccgcaacgttattacgagaagatgacaagattgctgatctcaattttctgatt
ggtcctaaattgtacgaagccaactggttggaattacaaaagagaggctttattgcaagg
gtacagtgtgctgaagtttggtgtcctatgacgccagaattttatagggaatatcttggt
tgcaaaatgagtaaaaaactgttgctttacgtaatgaatcctaacaaatttcgttgctgc
caatatttgatacggtaccacgaaaggcgaggtgataaaacgattgttttctcggataac
gtttttgctttaaaacattatgctattaagatgaataaaccatatatttatggtccaact
agtcaaagtgaacgaatacaaattttgcaaaatttcaaatttaataccaaagtaaatacg
atattcgtgagtaaagtggctgacacttccttcgatttaccggaagcaaatgtattaatt
caaatatcctcacacggtggttcaagaagacaagaagcacaacgattgggacgtatttta
agagctaagaaaggcgctattgcggaagagtacaatgcatttttctataccttagtatca
caagacacaatggaaatgaattattcaagaaagcgtcaacgtttccttgtgaatcaagga
tacgcttataaagtgatcacgaaacttgcaggaatggatgaagaaccagacttgatgtat
acatcaagggaagaacagggtcatttattgcaacaagttctgtctgctagcgacatggat
gcagatgaggaaaggataccgggtgaaggaccaagaccaattatacgtaaagctggaaac
atgacatccatgtctggtgcagatgatgcagtttattctgagtacaaaaaggcaaataag
catcctttgtttaagaaattcagagcatga
DBGET
integrated database retrieval system
