Osmia bicornis bicornis (red mason bee): 114871693
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Entry
114871693 CDS
T06109
Name
(RefSeq) tRNA-splicing ligase RtcB homolog
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
obb03016
]
114871693
Enzymes [BR:
obb01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
114871693
Transfer RNA biogenesis [BR:
obb03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
114871693
Prokaryotic type
tRNA splicing ligases
114871693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-GeneID:
114871693
NCBI-ProteinID:
XP_029033725
LinkDB
All DBs
Position
Unknown
AA seq
506 aa
AA seq
DB search
MVVRKYQEELNYLEKISDVCWRIKKGFQPNMKVEGVFYVNDTLERLMFEELRNACRPGTV
GGFLPGMKQIANVAALPGIVWRSVGLPDVHSGYGFAIGNMAAFDMNDPKSIVSPGGVGFD
INCGVRLLRTNLFEEDVTPVKEQLAQSMFDHIPVGVGSKGIIPMNAHDLEEALEMGMDWS
LREGYIWAEDKEHCEEYGRMLNADSSKVSMRAKKRGLPQLGTLGAGNHYAEIQVVDEIYD
KWAACKMGIEEKGQICVMIHSGSRGFGHQVATDALVQMEKAMKRDNIETNDRQLACAHIK
SKEGQDYLKAMAAAANFAWVNRSSMTFLSRQAFAKQFQMSPDDLDMHVIYDVSHNIAKIE
EHMVEGKQKTLLVHRKGSTRAFPPHHPLIPVDYQLTGQPVLIGGTMGTCSYVLTGTEQGM
KETFGSTCHGAGRALSRAKSRRNLDYTDVLEKLERQGISIRVASPKLVMEEAPESYKNVT
DVVNTCHAAGISKKCIKLRPIAVIKG
NT seq
1521 nt
NT seq
+upstream
nt +downstream
nt
atggtagtcaggaagtatcaggaagaattaaattatttagagaaaatatctgatgtgtgt
tggagaataaagaaaggttttcagcctaatatgaaggttgaaggtgtattttatgtaaat
gatacattagaacgtttaatgtttgaagaactacgtaatgcatgtaggccaggtacagta
ggtggatttctcccaggtatgaaacaaattgctaatgtagctgctcttcctggaattgtt
tggagatcagttgggttacctgatgttcattctggatatggttttgccattggtaacatg
gcagcatttgacatgaatgacccaaaatcaatagtatcacctggtggagtaggttttgat
ataaattgtggtgttcgtttgttgagaactaatttatttgaagaggatgttacaccagtg
aaagaacaattggctcaaagtatgtttgatcatattcctgttggtgttgggtcaaaagga
attattcctatgaatgcacatgatttggaagaagcattagaaatggggatggactggtct
cttagagaaggctatatctgggctgaggacaaggagcactgtgaggagtatggtaggatg
cttaatgcagattcttcaaaggtatcaatgagagccaaaaaacgtggtcttccacagtta
ggaacattaggagcaggaaatcattatgctgaaattcaagttgtagatgaaatctatgat
aagtgggctgcttgcaaaatgggtatcgaagagaagggtcaaatttgtgttatgattcat
tctggtagcagaggatttgggcatcaagttgcaactgatgcacttgttcagatggaaaaa
gctatgaaaagagataatattgaaactaatgataggcagttagcttgtgctcatataaaa
tctaaagaaggtcaagactatctaaaagcaatggcagcagcagcaaattttgcatgggtt
aacagaagttctatgacgtttctcagtcgtcaggcatttgcgaaacagttccaaatgtct
cccgatgatttagatatgcatgttatatacgatgtttctcataatatcgcgaagatagag
gaacatatggtagagggtaaacagaaaacccttctagtacacagaaagggatctacaaga
gcatttccacctcatcatcctttgattccggttgattatcaattaacgggtcaaccagtt
ctaatcggcggtactatgggaacttgcagctacgttcttaccggtaccgaacagggtatg
aaagagacatttggatcaacgtgtcatggagctgggcgagctttgtctagagctaaatca
cgtaggaatttggattacacggacgtactagaaaaattagagcgacaaggaatatcaatt
cgggttgcttcgcctaaattagtgatggaagaagcacccgagtcttataaaaatgtaacc
gacgttgtaaatacatgtcacgcggccggtatctctaaaaaatgtataaaattacgacca
atcgcggttatcaaaggataa
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