Osmia bicornis bicornis (red mason bee): 114871841
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Entry
114871841 CDS
T06109
Name
(RefSeq) RNA exonuclease 1 homolog isoform X1
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
114871841
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
obb03009
]
114871841
Ribosome biogenesis [BR:
obb03009
]
Eukaryotic type
Pre-60S particles
RNases
114871841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
Motif
Other DBs
NCBI-GeneID:
114871841
NCBI-ProteinID:
XP_029034148
LinkDB
All DBs
Position
Unknown
AA seq
1331 aa
AA seq
DB search
MLPSTGYFKAIGCPFYESGSCDRPYCHFKHSKRVLEDVCVTAEATETVESGAVGQVQEAK
TCTMVSSGSDVLQKLVTEAVKKVLANQDATNADQFSCQNVVSQVVEGLTPTLTPGSSNTF
DTVATNTTENRVDASASASVSVSVSKAIPCVYNPTPIAELKKRHIPIVSYMPTRDSRVAV
KRKCSPDGIKAWLATGCESSESIETAGEIKYKPTVIVNSEIRDTTQSYVPTYKLDSAPTY
FYKDESSNEYLFKLRESYYPKCKKRREEYVPKRVKTPLKTVEGLNESALEQFNRGFGTVD
ESLVLSKSTSAIQSKELFQTSCMDLEAKFSDDDDDDDDDDDDDDDDENDNENENDDDVEE
EEEDENNHENINKIDSENANCTSVEENELYRNVRRFDCLNGKRGHDAVIEEWSQVKVENE
CDEERNCNGTVLRNSNVPKQVKLTSKEGRKPLLHEEKKVAKADTDQVGSVNSKEFKSRDK
NKEKDQKDCDRSHKRYKVSKRDSYETSRSATHSKSKTKSHVEREKEKESRSTKSDKDKSR
HKDRKKHRSKEREKERERERERGGSRHKTNKRDKREDYHESEKCNERESKNCSDSSKRRE
HIEKRNDESKRSKRNKKSDDKTSGKFRRHAKHREGRSSVDRSVSSLEGNTGWNPIDDDDD
EENNDYNDDNNMMNMGIDVTFSTSDSDHDVQEECLKIFQEYQVPERAKPMESSKELPLHE
KEEKEENEEVGRKRVAHPSAATCVTRLTQGVNKQGKKVIHPQQKMYERWRLMRDAVVEKS
ISTVAEGGSCGGGGGGGGGCSSSNNVIKDVRRNCVETAAATCNSELKLNGGNGRVRIAHV
PYAKSLAIEKKKVRENAVVAAAAAAAASASASASVSASVSSKLTESQKTAAQTAKSGVRI
AHVPQVVPQLIRPEPLQVATQKFPLNVRQYYVNMMHDVCVLIYTNAEDAAQRAVKEEHAC
HERCKALAVYKNSCMLAAHRLRKEVDQNQSAENNAATTSGNSMVSHEAVLAGKAKGSWSV
LKTKKSVTEFRGVALYGMLKKWIMTEQQLRDNGFPRPHPDGQKGRAKVYVINSRNQSVLS
KVPNERVCCRCGQTYMIDKQGFALQSQNCIYHWGRKFTIRGEGKYSCCQQYGSATGCCDA
KTHVWDYTDYENLRGYVKTLPKGTTIEEQGVYALDCEMCYTTQGLELTRITIIDEDCNVV
YETLVKPQNPIIDYNTRFSGITEESMKDVATTLLDVQATILTMFSEKTILVGHSLESDFK
ALRLLHETVVDTSVMFPHKNGYPQKRALKNLCSEYLRKLIQNDVGGHDSKEDAMACMELI
LWKVKEEAKLQ
NT seq
3996 nt
NT seq
+upstream
nt +downstream
nt
atgttgccttcgactggttactttaaagctatcggttgtccattttacgaaagtggaagc
tgcgatagaccttactgtcattttaagcattcgaaacgggttttagaagatgtctgtgtt
accgcggaagcaaccgagacggtggaaagcggtgctgtgggtcaggttcaagaggcaaaa
acttgtacgatggtatcgtccggttcagatgttttacaaaaattagtaacggaagctgtt
aaaaaagttctcgcaaatcaagatgccacgaatgcggatcaattttcttgtcaaaatgtt
gtttcccaagtcgtagaaggactaacgccaaccttaacgcctggatcatccaatactttt
gatactgtagcaactaatacaacggagaatagagtagacgcgtcagcgtcagcgtctgta
tctgtatcggtcagtaaagcaattccatgcgtttacaatccaacaccaattgcagaatta
aagaaacgtcatataccaatagtatcctacatgccaaccagagatagtagagtggcggtg
aaacgtaaatgttctccggatgggataaaagcttggttggctacaggctgcgaatccagt
gaatcaattgaaactgctggtgaaattaaatacaaacctaccgtgatagtcaattctgaa
attcgagatactacacaaagttacgtacctacgtacaagttagattcagctccaacatat
ttctataaggacgagagttcgaacgaatatctgtttaagctgagagaatcgtattatcca
aagtgtaagaaaagaagagaagaatatgttccaaagagggtaaagacgccgttaaaaact
gtcgaaggattgaatgaatctgcgttagagcaattcaatagaggctttggtacggtagac
gaatcactggttctctccaaatctacttctgcgattcaatctaaagagttgtttcaaact
tcttgcatggacttggaagcgaaattttccgacgacgacgacgacgacgacgacgacgac
gacgatgatgatgacgacgagaacgacaacgagaacgagaacgacgacgacgtcgaagaa
gaggaagaagatgagaataaccatgaaaatataaataagattgattctgaaaatgctaat
tgtacatcggtagaagaaaacgagctttatcgtaatgttaggagatttgactgtttaaat
ggaaagagaggtcacgatgcagtgatcgaagagtggtcgcaggtaaaggttgaaaatgaa
tgcgacgaggagagaaattgtaatggaacagtattgagaaacagtaacgttccgaagcag
gtgaaattaacgagtaaagaaggtagaaaaccgttgctacacgaagaaaaaaaagtagcg
aaagcagatacggatcaagttggcagcgtaaattcgaaagaatttaaaagcagggataaa
aataaagaaaaggatcaaaaggattgtgatagatctcataaacgatataaagtttcgaag
cgtgattcgtacgaaacatcacgttcagcgactcatagtaaaagcaaaactaagagtcac
gtggaacgggaaaaagagaaagaatcaaggagtacaaagagtgataaggataaaagtagg
cacaaggatcggaaaaagcatagaagtaaagagagagagaaggagagggagagagaaaga
gaaaggggtggaagtagacataaaactaataagagggataaacgagaagattatcacgag
tcggagaaatgtaatgaacgcgagtccaagaattgttcggattcgtcgaaaaggcgggaa
catatcgagaagagaaacgatgaaagtaagcgttcgaaaaggaataagaaatcggacgat
aagacaagtgggaaatttcgtaggcatgcaaaacacagggaaggaagaagttctgtcgat
agatcggtgagttcgctggaaggtaacactgggtggaacccgatcgatgatgatgatgac
gaagaaaacaatgattacaatgatgataataatatgatgaacatgggcattgacgtaact
tttagtacatccgattcagatcatgatgtacaagaggagtgcttaaaaatatttcaggaa
tatcaagtaccagaacgagcaaaaccgatggagtcgtcgaaagaattaccgttgcacgaa
aaggaagaaaaggaagaaaacgaagaggttggtaggaaaagagtggcgcatccttcagcg
gctacatgtgttaccaggttaacccaaggggttaataagcaagggaaaaaagtgatacat
ccacaacagaagatgtacgaaaggtggcgtttgatgcgagatgctgtagtagaaaaaagt
atttctactgtagccgagggaggtagttgtggtggcggtggtggcggtggcggcggctgt
agtagtagtaataacgttatcaaggatgtacgtcgtaattgcgtggaaacggcagcagcc
acgtgtaacagcgaactcaaattgaacggaggaaatggtcgcgtgagaattgctcatgtg
ccgtacgcaaagtctctagcgatagagaaaaagaaagtgagagaaaatgcggtagtagcg
gcagcggcggcggcggcagcatcggcatcggcatcggcatcggtatcggcatcggtgtct
tcgaaattgacagagtcacaaaaaacagcagcgcaaacggccaagagtggtgtacgaatc
gcgcacgttccacaagtggttcctcaattaatacggcctgaaccgttgcaagtggctact
caaaaattccccttaaacgttcgtcagtattacgtgaatatgatgcacgacgtgtgcgtg
ttaatttacacgaatgccgaggatgcagcacagcgtgcggttaaagaagaacacgcttgt
cacgaaagatgtaaagcgttagccgtttataaaaattcttgtatgcttgccgcgcatcga
ttgaggaaagaagttgatcagaatcagtcggcagaaaataatgcggcgacaacatcaggt
aacagcatggtatcccatgaagcggtacttgctggaaaagcaaagggttcttggagtgtt
ctcaagacaaagaaatccgttacggagtttaggggagtagcgttatacggtatgttgaag
aaatggataatgacggaacagcagcttcgagataacggatttcctcggccacatccggat
ggtcaaaagggccgtgccaaagtttatgtaatcaattctcgaaatcagagtgtcttgtcg
aaagtgcctaacgaaagagtttgttgccgttgcggtcaaacttatatgatcgataaacaa
ggatttgcattgcaatcgcagaactgtatatatcattggggtagaaaattcacgatcaga
ggagagggtaaatacagttgttgtcaacaatatggttccgcgactggttgttgcgatgca
aaaacacacgtttgggattataccgattacgaaaatcttcgcggttatgtaaaaaccttg
ccaaaaggcacaacgatcgaggaacaaggagtgtacgcgctcgattgtgaaatgtgttat
acgacacagggattggaattgactagaataacgatcattgacgaagattgcaatgtagtc
tacgaaacgttggtcaaaccgcaaaatcctataatcgattataatacaaggttttctggg
ataacggaagaaagcatgaaggatgtggcgactacgttattagatgtccaagcaacgata
ctaacaatgttttcggagaaaactatattagtcggtcacagtctggagagtgatttcaaa
gctttaaggttattacatgagaccgtggtcgacacaagcgtcatgtttccgcataagaac
ggatatccacagaagagagcattgaagaacctttgttccgaatatttgagaaaactcatt
caaaatgatgtcggtggacatgacagcaaagaagacgctatggcctgcatggagttgatt
ctttggaaagttaaagaagaagcaaagttgcaataa
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