Osmia bicornis bicornis (red mason bee): 114872114
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Entry
114872114 CDS
T06109
Name
(RefSeq) protein kinase 4 isoform X1
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114872114
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obb03000
]
114872114
03019 Messenger RNA biogenesis [BR:
obb03019
]
114872114
04121 Ubiquitin system [BR:
obb04121
]
114872114
Enzymes [BR:
obb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
114872114
Transcription factors [BR:
obb03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
114872114
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
114872114
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
114872114
Ubiquitin system [BR:
obb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
114872114
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_4
RRM_1
Nup35_RRM_2
zf-C3HC4_2
Baculo_IE-1
zf-UDP
Motif
Other DBs
NCBI-GeneID:
114872114
NCBI-ProteinID:
XP_029034757
LinkDB
All DBs
Position
Unknown
AA seq
1045 aa
AA seq
DB search
MSVLNQSGEDAVECPLCMEPLDVNDLNFFPCTCGYQICQFCWHRIRTDENGLCPACRKAY
SENPADFKPLSEEDFARLKAEKRLKDQQRKQRVTENRKHLANVRVVQKNLVFVVGLPLRL
ADADVLKRHEYFGKFGKIHKVVINQSTSYAGSQGPSASAYVTYQRPEDALRAIAAVNNVV
MDGRTIKTSLGTTKYCSHFMRNQPCPKPDCMYLHDLGDQEASFTKEEMHQGKHQEYERKL
VQSLHASHASAQRKPTPSPAVTGSSIVRENGTSNSQAKEAWPSLQTGQTNSTQTNCKELS
PPSQTTSQLNNVTNGSGTINQQNHVPSTGTTQQQTNNNKGENMNLRRGKSNSESKAQAAR
NKHKNCQNKEKHSTRTTSRSESSSIGTQNNVQSQMNGQKDIRNYSSETNSDVLQKLGNKC
KSEQQQQSPPQQQQQQSSQPQQQSQPQQNNKGSKLVQQQQQQSQDLKVNGIVQNGERRHS
DSETDQQREGSTPASTISSSEDSNVNNQMEHLAESSEENSGAAILGSSPASTNSSQGANQ
QPPPGLHNGSQMQLNHRSIFQTDNNSFFSSNNFQKISTTIVPPTSLTANPNLKWTSTGLT
SIPDSLPSVQSSEDWQAAFGFQPESSRTNHVVQKSSPSSSPGVTFNSDGFVDEEVYANLQ
YTTLSESSATFTSSLLVNSPASKFMADFQQNSLQQRLALQAQQNQENCDYIKQNGHATLE
EVRNHKESGSDIKADDDLGFDPFHETQKALAELMENEMQLQQQRLFQQQQQQQREREEQN
RVQHQQNIANLGQQHFPPVAHIAHLQQQAQQLQNLQVLQQSHPLLSRLPQNLLQSGTQSP
AQSTVTAANLGQRSRLPPPGFPGSTPNHMNSFGLGIPRPAPTNNALSGAQPPQQNAYLPN
GNPLLNTQGISKCAGDAVYTLKDWCDINNQQQQQQFHHQALHQKGGWNNFGPIADWTSID
PAIVSSRPLPFQTTSTWQFPHVHPTHTVSHNAQQEQNGPTQHWAMQPPPGFAAPATTGQL
SNQQPSTTAQPHTKLISAGSEIENL
NT seq
3138 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtattgaatcaaagcggagaggatgcagtggagtgtcctttgtgtatggaacca
ttggatgtgaatgatttgaatttttttccatgcacttgtggctatcaaatatgtcagttt
tgttggcacagaattcgtaccgatgaaaatggtttatgccctgcttgtcggaaggcctac
tctgaaaatcctgccgatttcaaacctctaagtgaggaggatttcgccaggttaaaagca
gaaaagagattaaaagatcagcagcgtaagcagagggttaccgaaaaccgtaaacatcta
gcaaatgtgagagtagtacaaaaaaatctagtatttgtagtaggattaccattgcgactt
gcggatgctgatgtattaaagcggcatgaatattttggaaaatttggcaaaattcacaaa
gttgtaataaatcaaagcacttcctatgcagggtctcaaggtcctagtgcttcggcttat
gttacctaccaacgtccggaagatgcattacgtgctatagcggctgtgaataatgttgtc
atggatgggcgaacaattaaaacctcattaggaacaacaaagtactgttcacattttatg
cgtaatcagccttgtccaaaaccagattgtatgtatttacatgatcttggggaccaggag
gcatcgtttacaaaggaagagatgcatcaaggcaaacatcaagagtacgagcgtaaactt
gtgcaatcgttacatgcctcgcatgcatctgcgcaacggaaaccaacaccatcaccagcc
gtaacaggtagtagtattgttcgagaaaatggaacttcaaattctcaagccaaagaagct
tggccgtcgttgcaaactggacagacaaatagtacacaaacaaattgtaaagaattatca
ccaccgtcgcaaacaacatcacaactaaataatgtaacaaacggaagtggtacaataaat
caacaaaatcacgtaccgtcaactggtacgacgcaacagcagacaaacaataacaaaggt
gaaaatatgaatttacggaggggcaaaagtaatagtgaaagtaaagcacaggccgcgcga
aataaacataaaaattgtcaaaataaagaaaaacatagtacacggacaacttctcgatct
gaatcaagctctattggtacacaaaataatgtgcaatcgcaaatgaatggacaaaaagat
attagaaattattcttccgaaacaaatagtgacgtattgcaaaagttgggtaataagtgt
aaatcagaacaacagcagcagtcaccgccgcaacaacagcaacaacagtcgtcgcaaccg
caacagcaatcccagccgcaacaaaataataaaggatccaaattagttcaacagcagcag
cagcagtctcaagaccttaaagtaaatgggatagtgcaaaatggagaacgtcgacattcg
gatagtgagacagatcaacaacgtgaaggtagtacaccggctagtacaatttcaagctca
gaagattcaaatgtgaataaccaaatggaacatttagcagaatcaagtgaggagaacagt
ggtgctgctattttgggttcctctccagctagcacaaattcatcacaaggtgccaatcaa
cagccaccacctggactgcataatgggtctcaaatgcaactcaatcatcggtcgatcttt
caaacggataataatagcttcttcagttcaaacaatttccagaaaatctctactaccata
gtaccacctacttccttaacagcaaatccaaatttgaagtggacaagcacggggttaact
tcaattccagactcattgccatcggttcagtcaagcgaagattggcaagcagcttttggt
ttccaacccgaatcttcacgaacaaatcacgttgtacaaaagtccagtccttcaagttca
ccaggagtgacattcaattctgacggttttgtggatgaagaagtttacgctaatttacag
tatactacattatcagaatcctctgctacttttacatcaagtttgcttgttaactcacca
gcatcaaaatttatggcagactttcaacaaaattcattacaacaaaggcttgccttacaa
gcacaacaaaatcaagagaactgtgattatataaagcaaaatggtcatgctaccctggag
gaagttagaaatcacaaagaatctgggtcggatataaaagctgacgatgacttaggtttc
gatcctttccatgaaacacagaaagcactggctgaacttatggaaaacgaaatgcaactt
caacaacaaaggttatttcaacaacagcagcaacaacaaagagaacgggaagagcaaaat
agggtacagcatcaacagaatattgcaaaccttggtcaacaacattttccaccagttgcc
catatagcacatttacaacaacaggctcagcaactgcaaaacctccaagttcttcaacaa
tcgcatcccctgctgtctcgtcttccacaaaatttattacaaagtggtacgcaaagtcct
gctcagagtactgtgactgctgcaaatttgggacaacgtagtcgccttccgccaccaggt
ttccctggttctacaccaaatcacatgaattcttttggtcttggtataccgcgaccagct
cccacgaacaatgctctttcgggagcacagccaccacagcaaaatgcctatcttccaaat
ggaaatcctctgttgaatacgcaaggtattagtaaatgcgcgggcgatgcagtttatacg
cttaaggattggtgtgatattaataatcaacaacaacaacaacaatttcatcatcaagca
ttgcatcaaaaaggaggatggaacaattttggacctattgcagactggacttcgattgat
ccagctattgttagttctaggcctcttccattccagactactagtacatggcaatttcca
catgttcatcctacacatactgtatcacacaatgcgcaacaggaacagaatggaccgact
caacattgggcaatgcaaccacctccaggttttgctgcgccagcgactacaggacaattg
agtaatcaacaaccaagcacaactgcacagccgcacaccaaacttatctctgcaggatcg
gaaattgaaaatctataa
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integrated database retrieval system
