Osmia bicornis bicornis (red mason bee): 114872346
Help
Entry
114872346 CDS
T06109
Name
(RefSeq) vacuolar protein sorting-associated protein 8 homolog isoform X1
KO
K20178
vacuolar protein sorting-associated protein 8
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
114872346
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obb04131
]
114872346
Membrane trafficking [BR:
obb04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
114872346
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_VPS8
TPR_Vps8
VPS8_N
zf_RING_Vps8
WD40_CDC20-Fz
TPR_Vps41
Beta-prop_WDR5
ANAPC4_WD40
zf_RING_Vps8_fungal
WDR55
TPR_VPS8_2
Beta-prop_WDR36-Utp21_1st
zf-RING_Vps41
Beta-prop_EML_2
Beta-prop_WDR3_1st
Beta-prop_THOC3
PQQ_2
Clathrin
zf-RING_11
zf-RING_UBOX
Beta-prop_EML
Beta-prop_IP5PC_F
Beta-prop_WDR90_POC16_2nd
VPS18_RING_C
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
114872346
NCBI-ProteinID:
XP_029035275
LinkDB
All DBs
Position
Unknown
AA seq
1300 aa
AA seq
DB search
MAENGLGSDAGSQEYLATEIINLDIEELDNTEYAIPAVEELPSLESILTEPDCASLSGTD
NDFGLTPGEKLGSSETTSVGSHLSLNSLNKSNKTSQSSSSGTILRHVILKGISSQIVSAS
EKVNAGLASAVAAGGNMLVVGTSHGLILGFDSSQTLRWCDQEARHQGSVSALCFNYDGSR
VLAGFARGHILMIDSSNGKVLRTLTDVHPLDTAVLHVKFTDSPKVALCSDSGGSVFELIF
TRVMGVRGCDSRCLFSGSRGEVCTLEPLLLNHLPSHPLKNYTLVAMATLSKVIVVCIRPR
MRVVLTHPLSGAPIAPPQLSWQLVVIQAADASRVIDPVLALARDDVVHFYQVCTEAGSRV
KLFPLRRMTFPYTISNLRWLNPRSLAVLDTQERLHLVDVRAQDNLETLDMSRVRISYASS
HFKGLSTGGNVSKAMALAGERACYNTVVTFGTQLLLLGTKSLHVVCIRTWTERLRHLTIQ
RRFPEALALGLSFYQDKGKAVVGLRGSKQRRKQIARDKVCQVLIQYMEELNHCCSDETSE
FEIVTTCVDYCIQLENTDLLFGKLWDLVSESEGLKASYLHALESPLLDGSLRPRLPPLIA
QQLVTLYDQEEKIDSLQAIIVLLDVDCLDIHQVTTVCRQRCLWEALIHLQTTALGDFTAP
IHQLVPILHNLLTNSKDGLTRDSIQLGNALLVYASCCLAGRGFPRDELPEGMSQRAKTDV
LRALLSQHSSLANDTERQYPYLRTLLQFDAKGFLDVIAIAFQEPEFTSEMGLRQRQRLID
ILLNIVMPSTPLSPRNPDYINDEHRNLVLIFIANEVAENTVNLEPSMLNKMIEILCTDSS
MGSSKELNADKEDAILGLLRSKKIRNISDNTLLNLAERANFTRVAELLYSAREDWISVCK
CMISHSSRHHDIWVWLKNLPANSLQSVIMANVEALVGINASQFAILIATHMPNRVDEILE
KLESIPNLQYALLEALYQIVQYKEEDITFELKTELFEKYLELMCELRPDRVIEHIQGFHG
CRLNEALKIVQKTNHKDAEAVMLEKLGNYQDAFDILIKEFQNHLELYCQNKSLENTSIHT
AIQLAGLCRRSAGNLDWMPLVEIILQTHSNSKDEKVEKLSGKLLRITLEFLSGTTALSTV
LEQILKHPLATSGTIGDIRQLLSGVLTHSRYEQTLVETTARLVSLELHKALKKSLRNAGR
ACASASIICAICRQLLSQCTDYIIVFSCGHGFHSECLEEPKCCYKCLNTKGWASLVTNTV
YTTKSFHETKQILPPEFMRNKDLSLRLAPPTSLPDLEGIF
NT seq
3903 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaatgggttggggtcggatgctgggtctcaagaatatcttgcaacagagatt
attaatttagatattgaagagttggacaatacagaatatgctatacctgctgtggaggaa
ttaccttcattagaaagtatattaacagaacctgactgtgcttcattatctggaacagac
aatgactttggtttaacaccaggtgaaaaattaggtagtagcgaaacaacgagcgtcgga
agtcacttatcgttaaattctttaaataaatcgaacaaaacttcgcaatcatcatcttct
gggactattttaagacatgtcatattaaaaggaatatcatcacaaattgtgtccgctagc
gaaaaggtgaatgctggcttagcgagtgcagttgcagctggagggaatatgctagtagtt
ggaactagtcatggactgatattaggctttgattcgtcgcaaacgttacgatggtgtgat
caagaagcaagacatcagggatcagtgtctgctttatgttttaattacgatggaagtaga
gttctagcaggttttgctagaggtcacatattaatgatagatagctctaatggaaaagta
ttaagaacacttaccgatgttcatccgcttgatacagccgtattacacgttaaatttaca
gattcacctaaggtagcattatgcagcgacagcggtggatcggtttttgaattaatcttt
acgagagttatgggagtacgaggttgtgatagtagatgtttatttagtggatccagaggt
gaagtgtgtacattggaacctttgttattaaatcatctgccgtcgcatcccttgaaaaat
tatacattagtagcaatggcaacattatcaaaggtaatagtagtttgcataaggccacga
atgcgtgttgtgttaactcatcctttatctggtgctcctatagcaccaccacaattatct
tggcaacttgttgtcatacaagcagcagatgcttctcgtgtaattgatccagttttggct
cttgcaagagacgacgtagttcacttttatcaagtatgtaccgaagctggttcaagagtg
aaattatttcccttaagaagaatgacttttccatacacgataagtaatttacgatggttg
aatccaagatctttagcagtattggatacccaagaaagattacatttagttgatgtaaga
gcacaggataatctggaaactttagatatgagtcgtgttcgtatttcgtatgcatccagc
cattttaaaggtttatctaccggtggaaacgtttcaaaggcaatggcattggctggtgaa
cgagcatgttataataccgtggtaacatttggtacccaactattattattaggtaccaaa
agtctacatgtagtttgtattcgaacgtggacagaacgattgagacacttgacgatacag
agaagatttccagaagctttagcattgggactctctttttatcaagacaaagggaaagca
gttgtcggtcttcgtggttcgaaacaacgtcgtaaacaaatagctcgtgataaagtgtgt
caggttttaattcagtacatggaagaattgaatcattgctgttcagatgaaacttcagag
ttcgaaatagtcaccacttgtgtggattattgtatacaactagaaaatactgatttattg
tttggaaagttatgggatttagtctcggaatccgaaggattaaaggcgagttatttacac
gctctcgaaagtccattattagacggaagtttgcgtcctcggttaccaccattgattgct
caacaattagttactctttatgatcaagaggaaaaaatagactcacttcaagcaattata
gtgttattagacgttgattgtttagatattcatcaagtaacaacagtttgccgtcagcgg
tgcctttgggaagctctaatacatcttcaaacgacggcgttaggcgatttcactgctcct
attcatcaattagtgccgattttacacaatttattaacaaattcgaaagatggactaact
cgagacagtatacaacttggtaatgcacttctagtatatgctagctgctgtcttgccggt
cgtggttttcccagagacgaacttcctgaaggcatgtctcaaagagcgaaaacagacgtg
ttgagagctttactttcacaacactctagcttagctaatgacacagagaggcagtatccg
tacctaagaactttacttcaatttgatgcaaaaggattccttgatgtgattgcgattgcc
ttccaagaaccagaatttacatctgaaatgggtcttagacaacggcaaaggcttatagat
atattattaaatattgttatgcctagtacaccgttaagcccaagaaatcctgattacatc
aacgacgaacatagaaatctagttcttatattcatagctaacgaagtcgcagagaatact
gttaatttagagcctagtatgttaaataaaatgatagaaatattatgtactgattcaagc
atgggatcttcgaaagaacttaacgctgataaagaagacgcaatattgggattgttgcgt
tcaaagaaaatacgcaatatatcagataatactttacttaatttggcagaaagagctaac
tttacgcgagttgcggagttactgtacagtgcgagggaagattggatttcagtttgcaaa
tgcatgatatcgcattcatccagacatcatgacatttgggtctggttaaagaatcttccc
gcgaactcattgcaatcagttataatggccaatgtggaagctcttgtagggatcaatgcg
agtcaatttgctattcttatagcaacgcatatgccaaacagagtcgacgagatattagaa
aagttggaaagtattccaaacttgcaatatgctctgctagaagctttatatcaaatagta
caatacaaagaagaggatatcacgtttgaactgaaaactgaattatttgagaaatattta
gaactaatgtgtgaattacgaccggatcgtgtaattgagcatattcaagggtttcatggt
tgtagattgaacgaagcgctgaagattgttcagaagacaaatcataaagatgctgaagca
gtaatgttagaaaaattaggaaattatcaagatgcatttgatattcttataaaagaattt
caaaatcatcttgaattgtattgtcaaaataagagtttagaaaatacatcaatccatact
gcaattcagcttgcgggattgtgtagacggtctgctggaaatttagattggatgccactt
gtggaaattatacttcaaacacactcgaatagtaaagatgaaaaagtcgaaaaattaagt
ggaaagttgttgagaattacattagaatttcttagtggtacaacagcgttgtcaactgta
ttagaacaaatactgaaacatccattagcaacaagtggaacgataggtgatatcagacaa
ttattatccggagtacttacgcattctcgttacgaacaaaccttagtcgaaactacagca
cgtttggtcagtctggaacttcataaagcattaaaaaaatcactaaggaacgcgggtaga
gcgtgtgccagtgcatcaataatttgtgcaatatgtagacaattgttatcacaatgtaca
gactatataatagttttcagttgtggtcatggatttcattctgaatgtttggaagaacct
aaatgttgttataaatgtttgaatacaaaaggatgggcatcacttgttacgaatactgta
tatactactaaatcattccatgaaactaaacaaattctgcccccagaatttatgcgtaat
aaagatctttctttaagacttgcaccacctacttctttaccagatcttgagggtattttt
taa
DBGET
integrated database retrieval system
