Osmia bicornis bicornis (red mason bee): 114872752
Help
Entry
114872752 CDS
T06109
Name
(RefSeq) pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114872752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
obb03041
]
114872752
Enzymes [BR:
obb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114872752
Spliceosome [BR:
obb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
114872752
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
DEAD
AAA_22
AAA_19
nSTAND3
Flavi_DEAD
ResIII
AAA_30
SLFN-g3_helicase
T2SSE
Cas3-like_C_2
nSTAND_NTPase5
TsaE
Motif
Other DBs
NCBI-GeneID:
114872752
NCBI-ProteinID:
XP_029036160
LinkDB
All DBs
Position
Unknown
AA seq
886 aa
AA seq
DB search
MSKYRRKESSSEDSDSEEERRRRDIKERDEFANRLKAKDESKIRKVAMPAGSGAAEAAKR
LKIMETDMREKLLPKLRVESRRKYLEKRKEDKVAELEADIIDDEYLFEEEVLTDREKKER
DHKKQLLQLAKEHEKARELERVQRYHMPLEKGKLEPEPDVHENEPPQSEQSKWESDQMSS
AVFRFGAKDRKAQQDYDLLLEDEVEFVQALRMPGSERDRKREISPPPQVKALQTIQETKK
SLPIYPFRNDLIQAIKDHQVLIIEGETGSGKTTQIPQYLYETGFAENNKIIGCTQPRRVA
AMSVAARVAHEMAVKLGNEVGYAIRFEDCTSHRTRIKYMTDGTLHREFLSEPDLASYSVM
IIDEAHERTLHTDILFGLVKDITRFRTDLKLLISSATLDATKFSEFFDDAPIFRIPGRRF
PVDIYYTKAPEADYIDACVVSILQIHATQPHGDVLVFLTGQDEIETCQEMLQERVRRLGS
KLAELLILPVYANLPSDMQAKIFQPTPPGARKVVLATNIAETSLTIDNIVYVIDPGFAKQ
NNFNSRTGMESLMVVPISKASANQRAGRAGRVAPGKCFRLYTAWAYQHELEDNTVPEIQR
INLGNAVLTLKALGINDLVHFDFLDPPPHETLVLALEQLYALGALNHRGELTKLGRRMAE
FPLDPMMAKMLLASEQYRCSEEIATIAAMLSVNGAIFYRPKDKIIHADTARKNFHVPGGD
HLTLLNVYNQWQQSDFSTHWCYENFIQHRSMKRARDVREQLVGLMQRVEMDLVSGISETV
NVRKAITAGYFYHVARLSKGGHYKTAKHNQTVSIHPNSSLFQELPRWLLYHELVFTTKEF
MRQVTEIESKWLLEVAPHYYKPKELEDSTNKKMPKVAGRSRPDGTN
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatacagaaggaaagaatcctcaagtgaggatagtgatagcgaagaggaacga
cgcaggagggatatcaaggaaagagatgagtttgctaatagactcaaagctaaggatgag
agcaagatacggaaggttgctatgcctgctggctctggagcagctgaggcagcaaagagg
ctcaaaatcatggaaacagatatgagagagaagctgttaccgaaactacgtgttgaatct
cgcagaaaatatttggaaaagcgtaaagaggacaaagttgctgaattggaagctgatatt
atcgacgatgaatatctattcgaagaagaagtattaacagatcgtgaaaagaaagaaaga
gaccataaaaaacaactgctgcaattggcaaaggaacatgagaaagctagggagctcgag
agggtgcaaagataccatatgcccttggaaaagggcaagctggaaccagaaccagatgta
catgaaaatgaaccaccacagtctgaacagagcaagtgggaatctgatcagatgtcatct
gctgtttttcgttttggcgccaaggatcgaaaagcccaacaggattacgatcttctattg
gaggatgaagtggaatttgttcaagcattacgtatgcctggcagcgaaagagacaggaaa
cgagaaataagccctcctcctcaagtaaaagctttgcaaactatacaagaaacaaagaag
agtctcccaatttatcctttcaggaacgatcttattcaggccatcaaagatcatcaggta
ctgatcatcgagggagagacgggctcgggaaaaacaactcagattccccaatatttatac
gaaacagggttcgcagaaaacaataaaataattggctgtactcaacccagaagggtggca
gctatgtcggtcgcggcgagagtcgctcatgaaatggctgtgaaattgggaaacgaagtc
ggttacgcgattcgtttcgaggattgcacttcccatcgtactcgtattaaatacatgacc
gacggtacactgcatcgtgaatttcttagcgaaccagatttagcttcctacagcgtgatg
atcatcgacgaagctcacgagcgtaccttgcatacggatatacttttcggattggtaaaa
gacatcaccagatttcgtacagacttgaaacttctgatttcatcggccactttggacgcg
acgaaattcagtgaattcttcgacgatgctccgatatttcggatacctggccgacgtttc
cccgttgatatttattatactaaagctcccgaggcggactatatcgacgcttgtgtggtt
tccatccttcaaatccacgcgactcaaccgcacggtgatgttctcgtattcttaacaggg
caagatgaaatagaaacgtgtcaggaaatgttacaagaaagggtacgtcgactgggatcc
aaattggcggagttattgatattacccgtttatgcgaatctcccgagtgacatgcaggcg
aagatatttcaaccaactccgcccggagcaagaaaagtggttcttgctaccaacatagca
gagacctcgttaaccatagacaatatagtgtacgtgatagatcctggattcgcgaagcag
aataattttaattctcgcacaggcatggagagtttaatggtggtaccgatcagcaaagcc
tctgctaatcagagagccggtcgagccggaagagtggcaccagggaagtgtttccgactc
tatacagcttgggcttatcaacacgaattggaagacaataccgtgccagaaattcagaga
atcaatcttggaaacgcggtgctgacgttgaaagcgttaggaataaacgatctagtgcac
tttgacttcctggatccaccaccgcatgaaactctggttctagcattggaacaattatac
gcattaggtgctttgaatcatcgtggagagttaacgaaactcggccgaagaatggccgaa
tttcctttagatcctatgatggctaaaatgttactggctagcgaacagtaccgctgttcg
gaggaaatcgccaccatcgcggctatgctgtcggtgaacggagcgattttctacaggccg
aaggataaaattattcacgcagacacggcacgcaagaatttccacgtccctggtggcgat
catctgaccttgttgaacgtgtacaatcaatggcagcaaagcgatttcagcacccattgg
tgctacgaaaatttcattcaacatcggtcgatgaaacgagccagagacgtgagggaacaa
ttagtcggtctgatgcaaagggttgaaatggatcttgtttctgggatttcggaaacggtg
aatgttcgaaaggcaatcacggcgggttacttttatcacgtggcgcgattatcaaaaggg
ggacattataaaactgcgaaacataatcagacagtatcaatccatccgaatagttcgttg
tttcaagagttaccacgttggctactttatcacgagctggtgtttaccacgaaagaattc
atgcgacaggtaactgagatcgaaagcaaatggctcttagaagtagctccacattattac
aaaccgaaggagttggaagattctacgaacaagaagatgccgaaagtcgcgggaagatca
cgtccagatggaaccaattag
DBGET
integrated database retrieval system
