Osmia bicornis bicornis (red mason bee): 114873288
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Entry
114873288 CDS
T06109
Name
(RefSeq) transcription factor SOX-5-like isoform X1
KO
K09269
transcription factor SOX5/6/13 (SOX group D)
Organism
obb
Osmia bicornis bicornis (red mason bee)
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
obb03000
]
114873288
Transcription factors [BR:
obb03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
114873288
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
HVO_2142
NOCA1_C
Motif
Other DBs
NCBI-GeneID:
114873288
NCBI-ProteinID:
XP_029037300
LinkDB
All DBs
Position
Unknown
AA seq
845 aa
AA seq
DB search
MSTLGRLRMSSKRKSPPTKLSEGGGGTGTVIGANEEEEDTTSSVTGGPGGEVAVGEEGST
TPVDIEECYPHQRGGDCESSGCSSPATTSEPDLRDSPSPSSNSLRPSKGQRIGLSGQETL
APYHYPHHHHHHHHHHHHHHTNTSSSSGGVVEPASSSECGSPPTPLTVDPYYPNHPHHNN
NNTVTQNNNNSNGGSATTASTKRSMDDVLKRLTCKMNSESLSLQDDTSNNRRTSPPPSST
PTGHNAHCGGVASVPNSVPPSPPASGRMQNTEGQVQQDGASALHRVLCAESFAEKERTLS
EMILQLQLLREQLLQQQDQTKSYPVHMSVDSQKQIEIQRLQTEHLKRQQEHIMQHNIQEL
QAQMTKSQLNMSGPQSLMFLPFLEQLRGLPVQSPMPPPPATSTTTTNKHINSIANMISSH
REGPSWATAHLAQMTTQMEKEASPTPISSAVAPTAPPLQDLDAPLNLTKPKSSSSGATAS
SSSPGSDSHSTGAGSSGQQEQPLAATAPKLFPPGLPMPRNYLPSLPYAGLPPHLSTLSSP
MGKVMSKDEAGSAGGAAAAAAVAAVEKHFAMHGIYALPPSAGAMPPSPQTQRPMKHSASR
DEAAQEEQDYLSTSHMWREPGYKVPEDITEKAKMVRQQKREGENKPHIKRPMNAFMVWAK
DERRKILKACPDMHNSNISKILGARWKAMSNSEKQPYYEEQSRLSKLHMEKHPDYRYRPR
PKRTCIVDGKKMRISEYKSLMRQRRQEMRQLWCRDSGQEMSFLSPVGSDLSSQHHPGTGA
GPSARPSVSPPATMLNGGAAGPSSDHPSFYYPQDSLSPSDMMDFSPDNSGSIGGYDASPR
HHDED
NT seq
2538 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgcttggcagattgaggatgtcctcaaagaggaagtcaccaccaacgaagcta
tcggagggcgggggaggcacgggtacagtgataggcgccaacgaggaggaggaggatacg
acctcgtcggtgaccggtggtcccggtggcgaggtagccgtcggtgaagagggttccacc
acccccgtcgacatcgaggagtgttaccctcatcaaagaggaggcgactgcgagtcgtcc
ggctgttcgtcgccggcgaccaccagtgaaccggatcttcgcgattcgccatcaccctcg
tcgaattccctgcgaccaagcaagggacaaaggatcggtctgtccggtcaggaaacgctc
gcgccttaccactatcctcaccatcatcatcaccatcaccaccaccatcatcatcaccac
acgaatacatcgtcttcgtccggtggtgtcgtggaaccggccagttcctccgagtgtggc
tcaccgcctacccctttaaccgtcgacccctactacccgaaccatcctcaccacaacaac
aacaataccgtcacgcagaataataacaacagcaacggtggtagcgccaccacagccagt
accaaaagatccatggacgacgtgctgaagaggttaacctgcaagatgaacagcgagtcg
ttgtcgctgcaggacgataccagcaacaacaggcggacaagcccgccaccctcttccacg
ccgaccggccacaacgcacactgcggaggcgtcgccagcgtgccgaatagcgtgccaccc
tcacccccagcctccggaaggatgcagaacacggaaggacaagttcaacaggatggtgcc
tcggctttgcacagggtcctatgcgcggaaagcttcgcggagaaggaacgaacgctatcc
gagatgatcctgcaactgcagctgctcagggaacaattgctgcaacagcaagatcagacg
aagtcgtatcctgtgcacatgagcgtcgactcgcagaagcaaatcgagatacagcggcta
caaacggaacacttgaagcggcagcaagagcacatcatgcagcacaacatccaggagcta
caagctcagatgacaaagagccagctgaacatgtcaggaccgcaatccttgatgttccta
ccgtttctcgaacagctacgagggttacccgtgcaatcgcctatgccaccaccgccggcc
acgtcgaccaccaccaccaacaaacatatcaattcgatcgccaacatgatcagcagccac
cgggaaggtcctagctgggcgacggcgcatttggcgcaaatgacgacgcaaatggagaag
gaagcatcgccgacgccgatctcgtccgccgtcgcgcctacggcgcctcctctccaggat
ctcgatgcgccgttgaaccttaccaagccgaaatcctcgtcgtcgggggccacggcgtct
tcctcgtcgcccggaagcgattcgcactcgaccggggccggaagcagcggtcagcaggag
cagcctttggccgcgactgcgccgaagctctttccgcctggtttaccgatgccacggaat
tatttgcccagtcttccttacgccggattaccgccgcacctcagcaccctttcctctccg
atgggcaaagtgatgtcaaaagacgaagcaggcagtgcgggaggtgcggcagcagccgcc
gcggtcgcagctgtagagaaacacttcgcgatgcacgggatctacgcgctaccacctagt
gcaggtgcgatgcctccttcgcctcaaactcaacgacctatgaagcattccgcttcccgg
gacgaggctgcgcaagaggaacaagactatctctccacgtcgcacatgtggcgggagccg
ggttacaaggtaccggaagacataacggaaaaagctaaaatggtgagacagcagaagagg
gagggtgagaacaaaccacatatcaaacggcctatgaacgcgttcatggtgtgggccaag
gacgagcgtaggaaaattttgaaagcctgcccggatatgcacaactcgaacatatctaaa
atactcggcgctcgatggaaagcgatgtcgaattcggagaagcagccgtactacgaggaa
caatctcgattgtcgaagctgcacatggagaagcatcccgactacaggtacaggccgcga
ccgaagcgtacctgcatcgtggacggtaagaagatgcgaatttccgagtacaagtcgttg
atgcggcaacgacgacaggaaatgaggcagctctggtgtcgtgacagcggtcaagagatg
agtttcctgtcgccggtcggttccgatctaagcagccaacaccatccgggaacgggagcc
ggaccgtcggcgaggccgtccgtttcgccgcccgcgacgatgttgaacggaggtgcggct
ggtccgagttccgaccatccgtccttctactatccgcaggacagtctctcgccgtcggac
atgatggacttttcaccggacaattccggctcgatcggtggttacgacgccagtccacgg
catcacgacgaggattga
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