Osmia bicornis bicornis (red mason bee): 114874104
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Entry
114874104 CDS
T06109
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03030
DNA replication
obb03410
Base excision repair
obb03420
Nucleotide excision repair
obb03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
114874104
03410 Base excision repair
114874104
03420 Nucleotide excision repair
114874104
03430 Mismatch repair
114874104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obb03032
]
114874104
03400 DNA repair and recombination proteins [BR:
obb03400
]
114874104
DNA replication proteins [BR:
obb03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
114874104
DNA repair and recombination proteins [BR:
obb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
114874104
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
Rad17
BRCT_2
AAA_22
RuvB_N
nSTAND3
AAA_14
AAA_17
AAA_5
AAA_30
PTCB-BRCT
AAA_assoc_2
AAA_33
AAA_18
RNA_helicase
RCF1-5-like_lid
AAA_16
AAA_19
DUF1824
Motif
Other DBs
NCBI-GeneID:
114874104
NCBI-ProteinID:
XP_029038890
LinkDB
All DBs
Position
Unknown
AA seq
1014 aa
AA seq
DB search
MSKDIRSYFQPVKANSGIPNAAPSKAKKRIVISSDEDDEKSKSPIKQSKKSKISKKNVIE
SDSDSEVVAISPSEVLGKTPVSRQEAPKVARKLQRKEAKCHRDHKFEDTLRQLDASHIEK
KNSKENKVDKDSDLHESSTDNEKKKTTPVKKKETPEKSQVEKDKEQNVQTKKPSNSSSNE
DIEHSVPESSNKSKHAKKPAKGTSSAYNLEVKRIAVKRKASPEKDAYEERVEKRKHHAAV
YMQYLQRGGARNPGSKEIPVGAENCLAGLSFVVTGVLDSLEREEAEELIKKYGGRIVSLP
SKKTNYVIVGDQPGTSKIAKANALNLKTISEDDLLEMIRTRPAGQSADVIQPRARSKNRQ
TQKSTKSDDMSPSPKKRAKISETKETEKLERSPHKKETSEKDEKKQLEKSSHKKENDSKL
EKTPSPVKKEQNETKTSDVKDVKIKYIVRDINDNLSSEALVEKYRPKTMKQILGQQGEKS
NAKKLHNWLKNWNHNQNGQIKHSKPSPWAKNDDGAFFKAALLSGPPGIGKTTTAQVVCKE
LGFDLVEFNASDTRSKKLLKEAVSELLSNTSLKDYVTTCGKHNPTWKRVLLMDEVDGMAG
NEDRGGLQELIILIKSTEIPIICICNDRNNLKMRTLANYTYDLRFQKPRFEQIRGAMKSI
CFKENINVSTEDLDRLIESTNQDIRQVINHLSLFVGKTATQEKSEKQHVNKDLKLGPWDV
VKKVFDAEEHKNMSIHDKSDLFFHDYSFAPLFIQDNYLMVIPHAPRNQTLDRVAECAESL
ALGDIVEKSIRSNNNWSLLPVQACYSSVIPGTVMSGHIGGQINFPAWLGRNSKANKFDRL
IQELTIHMRLTTGASKEGVNLDYLKPLRNAITRPLVTAGMEGVDAAIDVMNKYHLLREDL
NSLIEVSLWPGDRDPMEAIDSKVKGAFTKTYNKNAAPVPYIVSGTSKKKATSALQDEAAL
VEEEEEVGNSDDDTIETDKMIKAKKPTTTKKTESKAKNTSNQPSKRGRGRGKAK
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaggatataagatcctattttcagcctgttaaggcaaattcgggtattccgaat
gccgccccatcaaaggctaaaaagagaatagtaatttcctctgatgaagatgatgaaaaa
tcaaaatctccgattaaacagtccaagaaatccaaaatatcaaagaagaatgttatcgaa
tctgattctgattctgaggtagtagcaatttctcctagtgaggtattgggtaagacacct
gtaagcagacaggaagcacctaaagtagcaagaaagttacagagaaaggaagctaagtgt
catagggatcataaatttgaggatactctgcgtcagttagatgcttctcatattgaaaag
aaaaattcaaaagagaataaagttgataaagattctgatttacatgaaagtagcactgac
aatgaaaagaaaaaaaccacacctgttaaaaagaaagaaacacctgaaaagtcacaggta
gaaaaagataaggaacaaaatgtacagactaaaaaaccttctaacagcagttccaatgaa
gatatagaacacagtgtgcctgaatctagtaacaaatctaagcatgcaaaaaaacctgct
aaaggtacatcatctgcttataacctggaagtaaaacgcatagcagtaaaaaggaaagca
tctcctgaaaaggatgcgtatgaggaacgagttgagaaaagaaaacatcatgctgcagtg
tacatgcaatatcttcaaagaggaggagctagaaatccaggatcaaaagaaattcctgtt
ggtgctgaaaattgtctagcaggattatcttttgtggtaactggtgttttggattcttta
gaaagagaggaagctgaagaactcattaaaaaatatggtggaagaattgtaagtttacct
tcaaagaagactaactatgtcatagtaggcgatcaacctggaacttcaaaaatagcaaaa
gctaatgcgttgaacttgaaaacaatatctgaagatgatttgttagaaatgattcgtact
aggcctgcaggtcagtctgctgatgtaatacaacctcgtgcacgttcaaaaaatagacaa
actcagaaatctacaaaatcagatgatatgtctccctcgccaaagaaaagagcaaaaatt
agtgaaactaaagaaacggaaaaattagaacgttcacctcacaaaaaagaaactagtgaa
aaggacgagaaaaaacaattagagaagtcatctcataaaaaggaaaatgatagtaaactt
gaaaaaacaccatcgccagttaagaaggaacaaaatgaaacaaaaacaagtgatgtaaag
gatgtaaaaataaaatatattgtacgtgatataaatgacaatttgtcttcggaggcattg
gttgaaaaatacagacctaaaactatgaaacaaattttaggtcagcagggagagaaaagc
aatgccaaaaagttacacaattggttaaagaattggaaccacaatcaaaatggtcaaatt
aaacacagtaaacccagtccttgggcaaaaaatgacgatggagctttctttaaagctgct
ttactgtctggtcctcctggaattgggaaaacaacaactgctcaagttgtttgtaaggaa
ctaggtttcgacctagtagaatttaatgcttcggatacacgaagcaagaaacttttgaaa
gaggcagtatcagaacttctatccaatacttcgttgaaagattatgtcacaacatgtggt
aaacacaatcctacctggaaacgtgttttactaatggacgaggttgatggaatggctggt
aatgaggatcgcggtggtctccaagaattaatcattttaatcaaaagtactgagatccct
attatttgtatctgcaatgatcgaaataatcttaaaatgagaactcttgctaattacacg
tatgaccttcgatttcaaaaaccaagattcgaacaaatcaggggagcaatgaaatcaatt
tgttttaaagaaaacattaatgtatcaacagaagatcttgatcgtttgattgaatcaact
aatcaagacattcgacaagttataaatcatttatcactatttgttgggaaaactgctact
caagaaaaatctgagaaacagcatgtaaataaagatttgaaattaggaccttgggacgtt
gtaaaaaaagtgttcgacgctgaggagcacaagaatatgagtatacatgataaaagtgat
ttatttttccatgattatagttttgcaccgttatttatacaagataactatttaatggtt
ataccacacgcgccaagaaatcaaacattagacagagtagcagaatgcgctgaaagttta
gctctaggagatatagttgaaaaatctataagaagtaacaataattggtctcttttacca
gtacaagcatgttattcttcagttatacctggaacagtaatgtctggtcatattggaggt
caaattaattttccagcatggcttggtcgcaactcaaaagctaacaaatttgatcgattg
atacaagagttaaccatacatatgcgtttgactactggtgcaagcaaggaaggtgtaaac
ttggattacttaaaacctcttagaaatgctatcactaggcccttggtaactgctggtatg
gaaggtgtagatgcagcaatagacgttatgaataaatatcatttactcagggaggatttg
aattctttaatagaagtttctttatggcctggtgatcgagacccgatggaagctatagat
agtaaagtaaaaggtgcctttacgaagacgtacaacaaaaatgctgcacctgtaccatac
atagtaagtggtacatcgaagaaaaaagcaacatccgctttgcaagatgaagctgcctta
gtagaagaagaagaagaagtgggaaattctgatgatgatactattgagacagataagatg
attaaggcgaagaagcctaccacaactaagaaaactgaatcaaaagctaaaaatactagc
aatcagcctagtaaacgtggaaggggacgtggaaaagcaaagtaa
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