Osmia bicornis bicornis (red mason bee): 114876354
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Entry
114876354 CDS
T06109
Name
(RefSeq) E3 ubiquitin-protein ligase parkin
KO
K04556
parkin [EC:
2.3.2.31
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb04120
Ubiquitin mediated proteolysis
obb04137
Mitophagy - animal
obb04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
114876354
04120 Ubiquitin mediated proteolysis
114876354
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
114876354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obb04131
]
114876354
04121 Ubiquitin system [BR:
obb04121
]
114876354
03029 Mitochondrial biogenesis [BR:
obb03029
]
114876354
Enzymes [BR:
obb01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.31 RBR-type E3 ubiquitin transferase
114876354
Membrane trafficking [BR:
obb04131
]
Autophagy
Mitophagy
PINK1-Parkin associated proteins
114876354
Aggrephagy
Other aggrephagy associated proteins
114876354
Xenophagy
Other xenophagy associated proteins
114876354
Ubiquitin system [BR:
obb04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
RBR proteins
114876354
Mitochondrial biogenesis [BR:
obb03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-dependent mechanism factors
114876354
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_14
IBR_2
zf-RING_12
ubiquitin
IBR_1
IBR
Rad60-SLD
Rcat_RNF216
Rad60-SLD_2
MamS_MamX
Ubiquitin_5
Motif
Other DBs
NCBI-GeneID:
114876354
NCBI-ProteinID:
XP_029043567
LinkDB
All DBs
Position
Unknown
AA seq
499 aa
AA seq
DB search
MSFFFDFIRNVFLTMLQLIWFSKRKVTNSLSIFVKTNTGSTIAVDLDPKWDIKNVKQLIA
SEMGISPEDIKIIFAGKELHNSTIIEECDLGQQSILHAIRTPPQRLNKSKDTSTIEESSE
LSESNESGGKPMNETLTDLPFDESDTQENSSMEEQQENRAHFFVFCSSPCKAVTVGKLRV
KCATCNSGAVTVDRDPQCWPDVLQPRRITVHCENDFCPAPTSISNDTECQVLYARFYFKC
AKHVSLGEKDEAVPLYLIKPNLRKIPCLACTDVRDMVLVFPCEAGHVTCLDCFRDYCSVR
LRERQFQFDETKGYYTLPCPAGCPDSFIPEVHHFHLLTPEQYEQYQRFSTEEYVLRAGGL
LCPRPDCGMGIIPSSPDDGINDECRRIQCIGGCGYVFCRRCLQGFHVGECELPPSESSNA
VHKSGYSVDPQRAKDAKWDEASKKTIQISTKPCPKCRTPTERDGGCMHMVCTRAGCGYHW
CWVCQTQWTRDCMGNHWFG
NT seq
1500 nt
NT seq
+upstream
nt +downstream
nt
atgagtttcttttttgacttcatacggaacgtgtttctaacgatgttgcaattaatttgg
ttcagtaaacgaaaagtaacaaattcactgagtatatttgtcaaaacaaatactggaagt
acaattgctgtcgatttagatccaaaatgggatataaaaaacgtgaaacagttaatagca
tcagaaatggggatatcacctgaagacataaaaataatatttgcaggtaaagaactgcat
aattcaacgataatagaggaatgtgatttgggtcaacaaagtatcttacatgcaattcga
actccgccacaaaggcttaataaaagcaaagacacgagtaccattgaagaatcttcagaa
ttatctgagtcaaatgaaagcggtggaaagccaatgaatgaaactcttactgatttacct
tttgacgaatcagacacgcaagaaaattcatccatggaagagcaacaagagaacagagca
catttctttgtattttgttcctcgccttgtaaagctgtcacagttggaaaattaagggtg
aaatgtgcaacttgcaacagcggagctgttacagtagacagagatcctcaatgctggcca
gatgtattacaacctagaaggataacagttcactgtgaaaatgatttttgtccagcacct
acatctatttctaatgatacagaatgtcaagttttgtatgcaagattctattttaaatgt
gcaaaacatgttagcctaggggaaaaggatgaagcagttcccctttatctcataaaacct
aacttaaggaagataccttgtcttgcttgtacagatgtgagagatatggtattagtcttt
ccatgcgaggcaggccatgtaacatgccttgattgctttagagattattgctcggttcgt
ttaagggaacgtcaatttcagtttgatgaaactaaagggtattatactttgccatgtcca
gctggatgcccagattcttttatccctgaagtccaccattttcatctcctaactccagaa
cagtatgaacagtatcaaaggtttagtaccgaagaatacgtcttacgcgctggtggactt
ctttgtccaagaccagattgtggcatgggtattataccatcatctccagatgatggtatt
aatgacgaatgtagaagaattcaatgtatcggtggttgtgggtatgtcttctgcaggaga
tgtttacaaggatttcatgtaggggaatgtgaattgccgccatccgagtcctccaatgca
gtacacaaatctggatattcagttgacccgcaaagagctaaagatgcaaaatgggacgaa
gctagtaagaaaactatacaaatttcaaccaaaccatgcccgaaatgcaggacaccaaca
gagagagatggaggatgtatgcacatggtttgcacccgagcaggatgtggttatcattgg
tgttgggtatgtcagactcagtggacaagagattgcatgggcaatcattggttcggttaa
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integrated database retrieval system
