Osmia bicornis bicornis (red mason bee): 114876492 Help Entry 114876492         CDS       T06109                                  Name (RefSeq) helicase SKI2W   KO K12599   antiviral helicase SKI2 [EC:5.6.2.6] Organism obb  Osmia bicornis bicornis (red mason bee) Pathway obb03018   RNA degradation Brite KEGG Orthology (KO) [BR:obb00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     114876492  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:obb03019]     114876492 Enzymes [BR:obb01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      114876492 Messenger RNA biogenesis [BR:obb03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     eIF4F and regulatory proteins      114876492   mRNA degradation factors    3'-5' decay     Ski complex      114876492 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  DSHCT Ski2_N DEAD MTR4_beta-barrel Helicase_C ResIII DEXQc_Suv3 ATPase_2 REV Motif Other DBs NCBI-GeneID:  114876492 NCBI-ProteinID:  XP_029043836 LinkDB All DBs Position Unknown AA seq 1225 aa AA seqDB search MEERNDRNEEFTFEFPPVWPDIKTELRGYIECLDNLPMYNLDNSQCYWPRKPDILSLLDT DLAPLGTTLKFDRDPITGKLGEMHEVVLESAGKTARNSMSMTRAPEPPTDDIRGNTSNIL FWPGGFDEPQIIEDSSVEEIDFENNLRTLAKGFSAGVEFKSDNCTPKEASMQEQQIEVEK NEIEAIADKINLMAIVNEERNVFDFWSSEKKEAEKKSKEPPNTQQSSFDDIALLLENIDI PVLKISEKRPETTKSEWAEQLDVSVPITDFEKRIPELAMSFPYELDTFQKQAILKLEEGC NVFVAAHTSAGKTTVAEYAIALSQKHMTRVIYTSPIKALSNQKYREFKRKFDSVGLLTGD LQINSDASCLIMTTEILKSMLYGASEVLRDLEFVIFDEVHYINNDERGHVWEESVILLPE TVTIVMLSATVPNPIIFADWVGHTKKKKMYVISTIKRPVPLQHYLYTGTDGKTKDEKFLV VDECGQFLLDGWYKATNAKDLKNQNSKNVKDVKRKSMSQQMTPKQEQVLWSAFISHLKSN NLLPVVVFMLSRKRCDMSAYILRNIDLTTETEKHTIRTFFQNNIRHLKGSDRELPQVLMM QEFLQNGIGIHHSGILPILKEIVEMLFQNGVVKLLFATETFAMGVNMPARTVVFDSIKKY DGNNFRILHPTEYIQMAGRAGRRGHDTAGMVIVMCRIAVPHFNELKTMMCGQAQNLESKF KVTYSMVLNLRRLNESVTVEGMMRRSFKESAVTLKQNIYKTELEKVEEELSKLPPLTDVQ KKLSDFYQVATDYLEYLKYLKPYICETQKKAVKDLVPGRVLLISYQSHYNKLALLLSTVQ HKIGRQYRVLVLKNSEVPKSGEDKSEEERNQKFKKTEKWHDIVALTKKEVFVPVGVPSDE VLNIFAWNILEITNCQIKIDCNLVIANWEKRQLPRFKTEPPSQTYETAMQELMKLSFNAS RDPSVLQPYTEMKLKYDIDMKIQHLLDLKKVMYDMKCTEISNFEEQFETVFERSELESQK RKLQLQLSDEGMSLYPEYTNAVALLRDLGYINENETVALKGRVALQMGSNELLITELILK NVLTVLQPAEIAALLSALIFQQRTDAEPDLTPNLQRSCEVLKEIYTELETLEQHYQLSTL QPLNFGLVEVVYDWAKAKSFADIMEKTDVQEGIIVRCIQQLSETLRDVKNAAVTIGDPVL KEKMEEACTAIKRDIVFAASLYTQD NT seq 3678 nt NT seq  +upstreamnt  +downstreamnt atggaggagagaaacgatagaaatgaggagttcacatttgaatttcctcctgtctggcct gatatcaagacagaattgagaggatatattgaatgtctggataacttaccaatgtataat ttagacaattcgcagtgttattggccaagaaaaccagacatcttatcccttttagatact gatttagcaccacttggtactacgttaaaatttgatcgagatcctataactggaaagctt ggagaaatgcatgaagtggtgttagagtcagcagggaaaactgcaagaaattcaatgtct atgactcgtgcaccagaaccacctacagatgatattcgtggaaataccagcaatattttg ttctggcctggtggttttgatgaacctcaaataattgaagactcatcagtagaggagatt gactttgaaaataatttgagaactttagccaaaggtttcagtgcaggtgtagagtttaaa agtgacaattgcactccaaaagaggcgtccatgcaagaacagcaaatagaagtagaaaaa aatgaaattgaagctatagcagataaaattaatttaatggctattgtaaatgaagaacga aatgtgtttgatttttggtcatcagagaaaaaagaagcagagaaaaaatccaaggaacct ccaaatactcagcaatcatcgttcgatgatatcgctttgttattagagaacatagacatt cctgttctaaagatttctgagaaacgcccggaaacaacgaaatcggaatgggcagaacaa ttagatgtgtctgttccaataactgattttgaaaaaagaattcctgaattggccatgagt tttccatacgaattagatacctttcagaaacaggcaattcttaaattggaggaaggttgt aatgtttttgttgccgctcatacgtcagccgggaaaacaacagtagcggaatatgcaatt gctctaagtcagaaacatatgacaagggtcatctatacgtctccgataaaggcactttcg aatcagaaataccgagaatttaaaaggaagtttgatagtgtaggtttgttaacgggagac ctgcaaattaattcagatgcttcctgtcttatcatgactacagaaattttaaaatcaatg ttatatggcgcatctgaagttttaagagacttagaatttgttatatttgacgaagtacat tatattaataatgacgagcgtggtcatgtctgggaagaaagtgttattcttttaccagaa acagttacgatagtaatgttatccgctactgtaccaaaccctataatatttgctgactgg gtcggtcatactaaaaagaaaaagatgtacgtgataagtactataaagagaccagtgcca cttcagcattatttatatactggaactgacggtaaaaccaaagatgaaaagtttttggtg gtggacgaatgtggacaatttttattggatgggtggtacaaagcaacaaacgccaaggat ttgaaaaaccaaaattcgaaaaatgttaaagatgttaagagaaaatcaatgtcacaacag atgactccaaagcaggagcaagtattatggagtgcttttataagccacctaaagagcaat aacttgttgcccgttgttgtttttatgttatcgagaaaacgttgtgacatgagcgcctat atattaagaaatattgatcttacaaccgagactgaaaagcacactattagaacatttttt caaaataatattagacacttaaagggcagcgacagagagttgccgcaagtacttatgatg caagaattcttgcaaaatgggattggtatacatcacagtggtatattaccaattttgaag gaaatagtagaaatgctttttcaaaacggtgtcgtaaagttattattcgcaacagaaacg tttgcaatgggtgtgaacatgccagcacgtaccgtagtctttgattctattaaaaaatat gacggcaataattttcgaatacttcatcccactgaatacatacaaatggctggtcgagcc ggccgtagaggccacgatacagcaggaatggtaatcgttatgtgtcggatcgcggtgcct cacttcaacgaattgaaaacgatgatgtgcggacaagcacaaaatttggaatcgaaattc aaagtaacatattcgatggttttaaatctaagaagactgaacgagtcggtgacggtcgaa ggaatgatgcggagatcgtttaaggaatcggctgtaaccttgaaacagaatatctataag actgaactagaaaaagtggaagaagaattatccaagttaccacctttgactgatgtgcag aagaaactttctgatttttatcaagtagccactgattacttagaataccttaaatatctg aaaccttacatatgcgaaacacagaagaaagcagtaaaagacttagtacctggcagagtt ttgctaatatcttaccagagtcattataataaattagctctcttattaagcactgttcag cataaaattggtagacagtacagagtattagtactgaaaaattcggaagtgccaaagtct ggagaagataaatcagaagaagaaagaaatcagaagtttaagaagacagagaaatggcat gacattgttgctttaacaaaaaaagaagtatttgtgccagttggagttccgtctgatgaa gtactaaacatattcgcttggaacatattagaaataactaattgtcaaattaaaattgat tgcaatctagttatcgcaaactgggaaaaaagacagttaccaagattcaaaaccgaacct cctagtcaaacatacgaaacagcgatgcaggaattaatgaaactatcttttaacgcttca cgcgatccttccgttttgcaaccttatacagagatgaaattgaagtacgatatagatatg aaaatacaacatttgcttgatttaaagaaggttatgtacgatatgaagtgcacggagatt tcaaatttcgaagaacaatttgaaactgtatttgaacgcagcgaattagaaagtcagaaa aggaaacttcaacttcaacttagcgacgaaggaatgagcttatacccagagtatacaaac gccgttgcacttctcagagatttaggatatataaatgagaatgaaacagttgctttaaaa ggccgggttgctctacaaatgggaagtaacgaattactaattacagagcttattcttaag aacgttttaactgtacttcaaccagcagaaatagcagcattgttatccgctttaatattt caacaacgaacagacgctgaaccagatcttacacctaacttgcaaaggagttgcgaggta ttgaaagaaatatataccgagttggaaactttagaacaacactatcagttgtcaacgtta caaccactaaatttcggtttagtggaagtggtttacgattgggcaaaagcaaaatcgttt gctgatattatggagaaaacagatgtacaggaaggaattatagtacggtgtattcaacaa ctaagcgaaacactacgggatgttaaaaacgcagccgttactataggcgaccccgtttta aaggagaaaatggaagaagcttgcacggccatcaaacgggatatcgttttcgcggcatct ttgtatacgcaagattaa

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