KEGG   Osmia bicornis bicornis (red mason bee): 114876949
Entry
114876949         CDS       T06109                                 
Name
(RefSeq) DNA repair protein RAD50
  KO
K10866  DNA repair protein RAD50 [EC:3.6.-.-]
Organism
obb  Osmia bicornis bicornis (red mason bee)
Pathway
obb03440  Homologous recombination
obb03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:obb00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    114876949
   03450 Non-homologous end-joining
    114876949
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:obb03032]
    114876949
   03400 DNA repair and recombination proteins [BR:obb03400]
    114876949
DNA replication proteins [BR:obb03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    114876949
DNA repair and recombination proteins [BR:obb03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     114876949
    BRCA1-C complex
     114876949
   NHEJ (non-homologous end-joining)
    MRX complex
     114876949
SSDB
Motif
Pfam: AAA_23 Rad50_zn_hook AAA_21 SMC_N SbcC_Walker_B AAA_29 DMPK_coil AAA_5 AAA_16 AAA_13 AAA_22 ABC_tran
Other DBs
NCBI-GeneID: 114876949
NCBI-ProteinID: XP_029044779
LinkDB
Position
Unknown
AA seq 1380 aa
MSRIRRLSIRGIRNFGDESEESKIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKFFIHDPALTTTSSVRGVIKAEISDAVGNVFTICRTIEYSKSNTSMKFKTLDSALSR
ISKITKEVVSITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKEKFDE
IFDSARYNKALENIMKNIKDLRQKIIILKGQKENCSYIVKELEDKETKLEDHKKRMKNIK
IKIEEINEDLEPISEKLNEMEKLESDYKNLLFEEKRKRAEYQMSKEQSQRLQKNISLLFK
GSLKELEEEYKSYDTNLIKKANEIKELETSLKGIVKEESSISKLLADERVTNGSLKQQIK
EQERKIASRNKLLNEALSAWDLENVDSDVSEIEVIALSKRLHEKLRELNSKLGENKLQRE
EKEKQIQKEVDTLRSEYLTIDSQKNVKEKELIETREELNKVKTEMSQIGAAANKLNSIES
KLENVKRKIQELNEVMDVDAAKEEVLDKTKLRNEMEIRLNAIDEDIASLLKQSSLEAELE
LNKSALLSKEKEIQKLKEKHEQKLMKLLNVTKLPESKLKNKLDTVQKQLMDEIEKIKQEI
QKAEHQSTTSETTITHMNHELQKKKKEMESDKLKIATICYYKNFDEVLLMQSRKVKDLQD
KRGMYAHQGAAYKEYMKQLKETNPCCPLCHRDFDKREAVVALLKDMEKEMESYPSRLKEC
EIELKTEQEKYDKMLQLKPLVENIVRFEETELETIKSNIETYENKLIHSQTFIIELKEKK
SEPENKLTMCNEIMSDIMLRDNYIDEIYKLKQIINNIQKRMTDAGIQTKYSLEEAQAKRE
ELKASLKNLSKEIETLQSKINTQSEKINNAREEQNTLHAEKLKIESNMQNLKQLKDKREE
LFTKEISLGSLLDQLRKKVAAAESELNAAVYELEKSKKENWEKLENDRKLSTEADRRLAD
LTKAQEETDLFIYRKIPKSIECSESKITKYQKSIDELFEKKNDIESRVNKLKQDINCQEI
RKRELYDNILLLKNQEDTKKLENECSIIEVKLSNIHYPRIVEERKQLQNREQTLLRQKNM
IKGNQEELERAVKEYTEELRKDIYRQARKNYKTKCIELTVLEETIINLNEYSKVLDAAMI
EYHEERMATVNRIIKEMWRLVYTGTDTTSIEIRTDATEGIGSAKRTYNYKLVQTKHGHEI
DMKGRCSAGQKVLASIIIRLALAETFCKNCGVLALDEPTTNLDQENADSLASALAMVVKL
RSQHQKNFQLIVISHDEKFLLKLAELNNNKGFHELYRKYNGYTAVRHCQVQNRDHAISSV
IKEEESSDEDADESLARIKDNSQSRTGLQEKGALQKRKRNIVSDDNNERFSKKRYVLNLT
NT seq 4143 nt   +upstreamnt  +downstreamnt
atgtcacgaataagaaggctttctattcgaggtattcgtaactttggcgacgaatccgaa
gaatctaaaattcgtttttctcgaccattgactcttattcttggtccaaatggtactgga
aaaacaacaattatcgaagcacttaaatttgctacttgcggtgaatttccacccggttca
gatcgaggaaaattctttattcatgatccagctttgactacaacttcgtcggttcgaggt
gttatcaaagctgaaatcagtgatgcagtaggcaatgtttttacaatatgtcgaacaata
gagtattcaaaatcaaatacatcaatgaaattcaaaactcttgatagtgctctaagtaga
ataagtaaaataacaaaagaggtggtatcgataaccaatcgatgtaccaatgtggataca
gaactcacattagcaatgggagtttcaaaacctattttagattatgtaatcttttgtcat
caagaagatcttaattggccttttcaagatggtaaaaaactgaaagaaaaatttgatgag
atttttgacagtgccagatacaacaaagctcttgaaaatatcatgaaaaatatcaaagac
ttaaggcaaaaaataattatattaaaaggacagaaagaaaattgctcatatattgttaaa
gaattagaggataaagaaacaaaacttgaagatcataaaaaacgaatgaaaaatattaaa
ataaaaatagaggaaatcaatgaagatttggaaccaattagtgagaaacttaacgaaatg
gaaaaactggaatctgattataagaatttgctatttgaagaaaaaaggaaaagagcagag
tatcaaatgtccaaagaacagtctcagagattgcagaaaaatatatcactgctatttaaa
ggatcgctaaaggagctagaagaggaatacaaatcttatgatacaaacttaataaaaaaa
gctaatgaaataaaagagcttgagacaagtttaaaaggtatcgttaaagaagaatctagc
atatcaaaattgttggctgatgaaagagtaaccaatggttctttgaagcaacaaattaag
gagcaggaaagaaaaattgcttcacgcaacaagttattaaatgaggcattgtctgcttgg
gatcttgaaaatgttgattctgatgtatcagagatagaggtgatagctctttctaaaaga
ttacatgaaaagttgcgggaattaaacagtaaactaggggaaaacaaattacaaagagaa
gaaaaagagaaacagatacagaaagaagtagatactttgcgtagtgaatatctaacaata
gattcacagaagaatgttaaagaaaaagaattgattgagacaagagaagaacttaataaa
gtaaaaacagagatgtcacagatcggtgcagcggcaaataaattaaattccattgaatcc
aagctagagaatgtaaaaagaaaaattcaggaattgaatgaagtgatggatgtagatgca
gcaaaggaagaagttcttgacaaaacaaaattacgaaatgaaatggaaatacgtttaaat
gcgattgatgaagatatagcctcgctattaaaacaaagttcgttggaggccgaattagaa
ttaaacaaatctgcattgctttccaaagaaaaagaaatacaaaaattgaaggaaaaacac
gaacaaaaattaatgaagctgttgaatgttacaaaattaccggaatctaaactaaaaaat
aaattagatacagttcaaaaacaattgatggatgaaatagaaaaaattaaacaagaaatt
cagaaagcagaacatcagtcaactacttcagaaacaacgataacgcatatgaatcatgaa
ctccaaaagaaaaagaaagaaatggagtcggataaattaaagatcgcaacaatatgctat
tacaaaaactttgacgaagttctgttaatgcagtcgagaaaagtgaaagatcttcaagac
aaaagaggaatgtatgctcatcaaggagctgcttacaaagaatatatgaaacaattaaaa
gaaacaaatccgtgttgtcctttgtgtcacagagattttgataaacgcgaggctgttgta
gctttattaaaagatatggaaaaggaaatggaaagttatccaagtcggttgaaagaatgc
gagatagagttaaaaactgagcaagaaaaatatgataaaatgttacaattaaaacctctg
gttgaaaatattgtacggttcgaagaaactgaattagagacaatcaagagtaacatagaa
acatatgaaaataaattgattcattctcaaacgtttataatagaattgaaggagaaaaag
tctgaacccgaaaataagctaacaatgtgtaacgaaatcatgagtgatatcatgctaagg
gacaattatattgatgaaatttataaactcaaacaaataattaataatattcaaaaacgc
atgactgatgcaggaattcagacaaaatatagcctcgaagaagctcaagctaaacgagaa
gagttaaaggcatcgttaaaaaacctctccaaggaaattgaaactctacaatctaaaata
aatacgcagagtgaaaaaattaataatgctcgagaagaacaaaatacattacatgcggag
aagttgaaaatagaatccaatatgcaaaatttaaaacagttgaaagacaagcgagaagaa
ttgtttacaaaagaaatttctcttggaagtttactagatcaattaagaaaaaaagtggct
gcagcagaaagtgaattaaatgcggcagtttatgaattagagaagtcgaagaaagaaaat
tgggaaaaactagaaaatgatagaaaattatcaacagaagcagacaggcgtttagctgac
ttaaccaaagcacaagaggaaactgatttatttatttaccgtaaaatccccaagtctata
gagtgttctgaatcaaaaataacaaagtatcaaaagtcaattgacgaactgtttgaaaag
aaaaacgatatagaatcaagagtaaataaattaaagcaagatattaattgtcaagaaatc
cgcaagagagaattatacgataacattctattactgaaaaatcaagaagatactaaaaaa
ttagaaaatgaatgttcaataatagaagtaaaactaagtaatatacattatcctcggata
gtagaagaacgaaagcaattgcaaaaccgggaacaaactttactccgtcagaaaaatatg
atcaaaggaaatcaagaagaattagaaagagcagtgaaagaatacactgaagaactgagg
aaagatatttacagacaagctcgtaaaaattataaaacgaaatgcattgaattaacggta
ctagaagaaaccataataaacttaaacgaatatagtaaagtattagatgcggctatgatc
gaataccatgaagaacgtatggcaacggttaacagaatcattaaggaaatgtggaggctt
gtatatactgggacagataccacatccatagaaattcgcacagatgctacggaaggtata
ggcagtgcaaaaagaacgtataactacaaactagttcaaaccaaacatggtcatgaaata
gatatgaaaggtcgctgcagcgctggtcaaaaagtcttagcatcgataattataaggcta
gctttagcagagaccttttgtaaaaattgcggagttctcgctctggatgaaccgacaaca
aacttggaccaggaaaatgcagatagtttagcaagtgctttagctatggttgttaaattg
cgatcacagcatcaaaagaatttccaattgattgtgatcagtcatgacgaaaagttttta
ttaaaattagccgaattaaacaataataaaggctttcatgaactttaccgtaaatataac
ggatatacggcagttagacactgtcaagtacaaaatcgagatcatgctatatcaagtgtc
ataaaagaagaagaatcatcagatgaagatgctgatgaatctttagcacggataaaagat
aattcacagtcaagaacaggtttacaggagaaaggagcattgcaaaagagaaaaagaaat
atcgtcagtgatgataataatgaacgcttctcaaaaaagagatacgttttaaatttaact
taa

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