Osmia bicornis bicornis (red mason bee): 114876949
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Entry
114876949 CDS
T06109
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03440
Homologous recombination
obb03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
114876949
03450 Non-homologous end-joining
114876949
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
obb03032
]
114876949
03400 DNA repair and recombination proteins [BR:
obb03400
]
114876949
DNA replication proteins [BR:
obb03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
114876949
DNA repair and recombination proteins [BR:
obb03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
114876949
BRCA1-C complex
114876949
NHEJ (non-homologous end-joining)
MRX complex
114876949
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SMC_N
SbcC_Walker_B
AAA_29
DMPK_coil
AAA_5
AAA_16
AAA_13
AAA_22
ABC_tran
Motif
Other DBs
NCBI-GeneID:
114876949
NCBI-ProteinID:
XP_029044779
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MSRIRRLSIRGIRNFGDESEESKIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKFFIHDPALTTTSSVRGVIKAEISDAVGNVFTICRTIEYSKSNTSMKFKTLDSALSR
ISKITKEVVSITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKEKFDE
IFDSARYNKALENIMKNIKDLRQKIIILKGQKENCSYIVKELEDKETKLEDHKKRMKNIK
IKIEEINEDLEPISEKLNEMEKLESDYKNLLFEEKRKRAEYQMSKEQSQRLQKNISLLFK
GSLKELEEEYKSYDTNLIKKANEIKELETSLKGIVKEESSISKLLADERVTNGSLKQQIK
EQERKIASRNKLLNEALSAWDLENVDSDVSEIEVIALSKRLHEKLRELNSKLGENKLQRE
EKEKQIQKEVDTLRSEYLTIDSQKNVKEKELIETREELNKVKTEMSQIGAAANKLNSIES
KLENVKRKIQELNEVMDVDAAKEEVLDKTKLRNEMEIRLNAIDEDIASLLKQSSLEAELE
LNKSALLSKEKEIQKLKEKHEQKLMKLLNVTKLPESKLKNKLDTVQKQLMDEIEKIKQEI
QKAEHQSTTSETTITHMNHELQKKKKEMESDKLKIATICYYKNFDEVLLMQSRKVKDLQD
KRGMYAHQGAAYKEYMKQLKETNPCCPLCHRDFDKREAVVALLKDMEKEMESYPSRLKEC
EIELKTEQEKYDKMLQLKPLVENIVRFEETELETIKSNIETYENKLIHSQTFIIELKEKK
SEPENKLTMCNEIMSDIMLRDNYIDEIYKLKQIINNIQKRMTDAGIQTKYSLEEAQAKRE
ELKASLKNLSKEIETLQSKINTQSEKINNAREEQNTLHAEKLKIESNMQNLKQLKDKREE
LFTKEISLGSLLDQLRKKVAAAESELNAAVYELEKSKKENWEKLENDRKLSTEADRRLAD
LTKAQEETDLFIYRKIPKSIECSESKITKYQKSIDELFEKKNDIESRVNKLKQDINCQEI
RKRELYDNILLLKNQEDTKKLENECSIIEVKLSNIHYPRIVEERKQLQNREQTLLRQKNM
IKGNQEELERAVKEYTEELRKDIYRQARKNYKTKCIELTVLEETIINLNEYSKVLDAAMI
EYHEERMATVNRIIKEMWRLVYTGTDTTSIEIRTDATEGIGSAKRTYNYKLVQTKHGHEI
DMKGRCSAGQKVLASIIIRLALAETFCKNCGVLALDEPTTNLDQENADSLASALAMVVKL
RSQHQKNFQLIVISHDEKFLLKLAELNNNKGFHELYRKYNGYTAVRHCQVQNRDHAISSV
IKEEESSDEDADESLARIKDNSQSRTGLQEKGALQKRKRNIVSDDNNERFSKKRYVLNLT
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaataagaaggctttctattcgaggtattcgtaactttggcgacgaatccgaa
gaatctaaaattcgtttttctcgaccattgactcttattcttggtccaaatggtactgga
aaaacaacaattatcgaagcacttaaatttgctacttgcggtgaatttccacccggttca
gatcgaggaaaattctttattcatgatccagctttgactacaacttcgtcggttcgaggt
gttatcaaagctgaaatcagtgatgcagtaggcaatgtttttacaatatgtcgaacaata
gagtattcaaaatcaaatacatcaatgaaattcaaaactcttgatagtgctctaagtaga
ataagtaaaataacaaaagaggtggtatcgataaccaatcgatgtaccaatgtggataca
gaactcacattagcaatgggagtttcaaaacctattttagattatgtaatcttttgtcat
caagaagatcttaattggccttttcaagatggtaaaaaactgaaagaaaaatttgatgag
atttttgacagtgccagatacaacaaagctcttgaaaatatcatgaaaaatatcaaagac
ttaaggcaaaaaataattatattaaaaggacagaaagaaaattgctcatatattgttaaa
gaattagaggataaagaaacaaaacttgaagatcataaaaaacgaatgaaaaatattaaa
ataaaaatagaggaaatcaatgaagatttggaaccaattagtgagaaacttaacgaaatg
gaaaaactggaatctgattataagaatttgctatttgaagaaaaaaggaaaagagcagag
tatcaaatgtccaaagaacagtctcagagattgcagaaaaatatatcactgctatttaaa
ggatcgctaaaggagctagaagaggaatacaaatcttatgatacaaacttaataaaaaaa
gctaatgaaataaaagagcttgagacaagtttaaaaggtatcgttaaagaagaatctagc
atatcaaaattgttggctgatgaaagagtaaccaatggttctttgaagcaacaaattaag
gagcaggaaagaaaaattgcttcacgcaacaagttattaaatgaggcattgtctgcttgg
gatcttgaaaatgttgattctgatgtatcagagatagaggtgatagctctttctaaaaga
ttacatgaaaagttgcgggaattaaacagtaaactaggggaaaacaaattacaaagagaa
gaaaaagagaaacagatacagaaagaagtagatactttgcgtagtgaatatctaacaata
gattcacagaagaatgttaaagaaaaagaattgattgagacaagagaagaacttaataaa
gtaaaaacagagatgtcacagatcggtgcagcggcaaataaattaaattccattgaatcc
aagctagagaatgtaaaaagaaaaattcaggaattgaatgaagtgatggatgtagatgca
gcaaaggaagaagttcttgacaaaacaaaattacgaaatgaaatggaaatacgtttaaat
gcgattgatgaagatatagcctcgctattaaaacaaagttcgttggaggccgaattagaa
ttaaacaaatctgcattgctttccaaagaaaaagaaatacaaaaattgaaggaaaaacac
gaacaaaaattaatgaagctgttgaatgttacaaaattaccggaatctaaactaaaaaat
aaattagatacagttcaaaaacaattgatggatgaaatagaaaaaattaaacaagaaatt
cagaaagcagaacatcagtcaactacttcagaaacaacgataacgcatatgaatcatgaa
ctccaaaagaaaaagaaagaaatggagtcggataaattaaagatcgcaacaatatgctat
tacaaaaactttgacgaagttctgttaatgcagtcgagaaaagtgaaagatcttcaagac
aaaagaggaatgtatgctcatcaaggagctgcttacaaagaatatatgaaacaattaaaa
gaaacaaatccgtgttgtcctttgtgtcacagagattttgataaacgcgaggctgttgta
gctttattaaaagatatggaaaaggaaatggaaagttatccaagtcggttgaaagaatgc
gagatagagttaaaaactgagcaagaaaaatatgataaaatgttacaattaaaacctctg
gttgaaaatattgtacggttcgaagaaactgaattagagacaatcaagagtaacatagaa
acatatgaaaataaattgattcattctcaaacgtttataatagaattgaaggagaaaaag
tctgaacccgaaaataagctaacaatgtgtaacgaaatcatgagtgatatcatgctaagg
gacaattatattgatgaaatttataaactcaaacaaataattaataatattcaaaaacgc
atgactgatgcaggaattcagacaaaatatagcctcgaagaagctcaagctaaacgagaa
gagttaaaggcatcgttaaaaaacctctccaaggaaattgaaactctacaatctaaaata
aatacgcagagtgaaaaaattaataatgctcgagaagaacaaaatacattacatgcggag
aagttgaaaatagaatccaatatgcaaaatttaaaacagttgaaagacaagcgagaagaa
ttgtttacaaaagaaatttctcttggaagtttactagatcaattaagaaaaaaagtggct
gcagcagaaagtgaattaaatgcggcagtttatgaattagagaagtcgaagaaagaaaat
tgggaaaaactagaaaatgatagaaaattatcaacagaagcagacaggcgtttagctgac
ttaaccaaagcacaagaggaaactgatttatttatttaccgtaaaatccccaagtctata
gagtgttctgaatcaaaaataacaaagtatcaaaagtcaattgacgaactgtttgaaaag
aaaaacgatatagaatcaagagtaaataaattaaagcaagatattaattgtcaagaaatc
cgcaagagagaattatacgataacattctattactgaaaaatcaagaagatactaaaaaa
ttagaaaatgaatgttcaataatagaagtaaaactaagtaatatacattatcctcggata
gtagaagaacgaaagcaattgcaaaaccgggaacaaactttactccgtcagaaaaatatg
atcaaaggaaatcaagaagaattagaaagagcagtgaaagaatacactgaagaactgagg
aaagatatttacagacaagctcgtaaaaattataaaacgaaatgcattgaattaacggta
ctagaagaaaccataataaacttaaacgaatatagtaaagtattagatgcggctatgatc
gaataccatgaagaacgtatggcaacggttaacagaatcattaaggaaatgtggaggctt
gtatatactgggacagataccacatccatagaaattcgcacagatgctacggaaggtata
ggcagtgcaaaaagaacgtataactacaaactagttcaaaccaaacatggtcatgaaata
gatatgaaaggtcgctgcagcgctggtcaaaaagtcttagcatcgataattataaggcta
gctttagcagagaccttttgtaaaaattgcggagttctcgctctggatgaaccgacaaca
aacttggaccaggaaaatgcagatagtttagcaagtgctttagctatggttgttaaattg
cgatcacagcatcaaaagaatttccaattgattgtgatcagtcatgacgaaaagttttta
ttaaaattagccgaattaaacaataataaaggctttcatgaactttaccgtaaatataac
ggatatacggcagttagacactgtcaagtacaaaatcgagatcatgctatatcaagtgtc
ataaaagaagaagaatcatcagatgaagatgctgatgaatctttagcacggataaaagat
aattcacagtcaagaacaggtttacaggagaaaggagcattgcaaaagagaaaaagaaat
atcgtcagtgatgataataatgaacgcttctcaaaaaagagatacgttttaaatttaact
taa
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integrated database retrieval system