Osmia bicornis bicornis (red mason bee): 114878035
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Entry
114878035 CDS
T06109
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114878035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obb03019
]
114878035
03012 Translation factors [BR:
obb03012
]
114878035
Enzymes [BR:
obb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
114878035
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
114878035
Translation factors [BR:
obb03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
114878035
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
Helicase_C
HA2_N
HA2_C
nSTAND3
AAA_22
AAA_14
RsgA_GTPase
AAA_19
ResIII
ATPase
PhoH
NB-ARC
ATPase_2
NACHT
NPHP3_N
ABC_tran
AAA_23
AAA_16
baeRF_family3
TsaE
Sigma54_activat
dsRBD2
Motif
Other DBs
NCBI-GeneID:
114878035
NCBI-ProteinID:
XP_029047215
LinkDB
All DBs
Position
Unknown
AA seq
983 aa
AA seq
DB search
MILVKRINYIKKSRPIFLVYNSRSKVDSSQSESSRTEHHGASRSTGQRHPPWLKGKDIGL
YYRDKAINKAKQKQQFICNIKLPSHVQDKIENLLERSKGYYDKLHNNEACTEDTNTALEN
KYVHIHDSQFKRKFLNIVSGNIQENLAKALLVKSKLDKDNDIDEKLINEYKAKQSLQEYE
NMMTFRTKLPSYQKRSEILELLRENQVVVISGETGCGKTTQIAQFILDDQIEQGNGSVTK
IICTQPRRISAISVAERVAAERAEKLGRSVGFHIRLEKVLPRDRGSILFCTTGLLLQFMQ
GDPALKEFSHIILDEIHERSTDSDFIIALLKLIIPKRPDLKVILMSATLNSETFSKYYNG
CPMIHIPGFTYPVEEFYLEDVLSLTRFKFPEAQLPPQDHRKHSKKYKKMQETTDEFFRII
DPHIRRLVAQKTYPRHVTDQLRNPESEKLSLELTEQLIWYICSTKGPGAILVFLPGMMDI
IKLHRMLLDSVRYPDSQYVIYPLHSLMPTIDQKLIFKEPPEGVRKIIIATSIAESSITIE
DIVYVIDCGKTKFGKFDIEKNVQTLEPEWISLANAKQRRGRAGRVRPGFCYHLYSKAREM
TFEQYPLPEMLRTRLEEVILRIKILQLGKARSFLDSVMNPPNWEAIDLSLNLLRTLNALD
NDENLTPLGYHLAQLPVDPRTGKMIIWAALFSCVEPVFAIAASLSFKHAFYCPLGKEAEA
KQKKLELNKEQYSDHIALAEALTRFESSYRRGNAGYFCRNYFLSFSTLKLLSEMKSQFAQ
HLYEMKFLNSQNPSDPNANRNSDNITLVKAIVCAALYPNVAVIRDVTKNGTLAWTPEDGR
VTIHPSSVNDKVKQVPSQFITYFTKQRSTAVYLHDTTCVTVPILIFAAPNICIKVEKGNF
VITLPSFQTFPCDQRTAQLIQKLQDQFNNMLEYKITHPGTVTWNNYEGDLLNAIIDVVCQ
TNESMGFSKSNVQEQRNNTYDDV
NT seq
2952 nt
NT seq
+upstream
nt +downstream
nt
atgatactagtgaaaagaattaattatattaaaaaatcaagaccgattttcttagtttac
aacagtaggagcaaagttgatagttctcagtctgaaagttcacgcactgaacatcatggt
gcttcaagaagcacagggcaaagacatcccccatggttaaagggaaaagatataggatta
tattacagagacaaagccattaacaaagctaaacaaaagcaacaattcatctgcaacatt
aaacttccatcacatgttcaagataaaattgaaaatttgttagaaagatctaaaggatat
tatgataaactacataacaatgaagcttgtacagaagatacaaatactgcattggagaat
aaatatgttcatattcatgattcccagtttaagagaaagtttttaaatatagtgtctggt
aatatacaagagaatcttgccaaagctttacttgttaaatcaaagttagacaaggataat
gatatagacgagaaattaataaatgaatataaggcaaaacagtctttgcaagaatatgag
aatatgatgacatttcgaacgaaattgccatcatatcaaaaaagatcagaaatattagaa
ttacttagggaaaatcaagttgttgtaataagtggagagactggttgtggtaaaacaaca
caaattgcccagtttatattggatgaccaaatagaacaaggcaatggtagtgttaccaaa
atcatttgcactcaacctagaagaatatcagctatatctgttgctgaaagagttgctgct
gaaagagcagaaaaacttggtagatctgttggtttccacataaggcttgaaaaagtatta
cccagagatagaggaagtatattattttgtactactgggttattattacaattcatgcaa
ggtgatccagctttaaaagaattctctcacattattctggatgaaattcacgaacgttct
acagatagtgatttcattattgctctattaaaattaattattccaaagaggccggatttg
aaagttattttaatgagcgcgacgcttaactcggaaacattttcaaaatattataatggc
tgtccaatgattcacattcccggtttcacttacccagtggaagaattttatttagaggat
gttttatcactcacaagatttaagttccctgaagcacagcttccccctcaagatcatagg
aaacacagtaaaaaatataaaaaaatgcaggagaccacagatgagtttttcagaatcata
gatccacacatccgcagacttgtagcacaaaaaacatatccaagacatgtgactgatcag
ttaagaaacccagaaagtgagaaattatctcttgaacttacagaacaattgatttggtat
atctgtagtacaaaaggtccaggagccattttagtttttcttcctggtatgatggacata
ataaaattacacaggatgttgttagatagtgtacgatatcctgatagtcaatatgttatt
tatcctcttcactctcttatgccaacaattgatcagaaactcatattcaaagaaccaccc
gaaggggttcgaaaaataattatcgctacttctatcgctgaaagttctataactatcgaa
gatatagtatatgtcattgattgtggaaaaacgaaatttggaaagtttgatatagagaag
aatgtacaaactttagaaccagagtggatatccttggcaaatgcgaaacaaagaagaggt
agagcaggcagagtaagacctggtttttgttatcatttgtattcgaaagctagagaaatg
acgtttgaacagtatccattaccggaaatgttaagaacacgattagaggaagttatttta
cgtataaaaattttacaattaggaaaggctagatctttcctagacagtgttatgaaccct
ccaaactgggaagctatagatttatctttaaatttactcaggaccctgaatgcattagat
aatgacgaaaatttaacacctttagggtatcatttggcacaactgccagttgatccacga
acaggaaaaatgatcatatgggcagcattattttcatgtgtcgaaccagtatttgcaatc
gcagcgagtttaagtttcaaacacgcattttactgtcctctagggaaagaggcagaagca
aagcaaaagaaacttgagcttaataaggagcaatatagcgatcacatagcattagccgaa
gcattgacgagattcgaatcttcgtatagaaggggaaatgctggttatttttgtagaaat
tattttctttcttttagtacgctgaaacttctttccgaaatgaaatcacaatttgctcaa
catttgtacgaaatgaaatttttgaacagtcaaaaccctagtgatccaaatgccaataga
aattctgataacataactttggtaaaagcaatagtatgcgccgcattatacccaaatgtt
gctgtaatcagggatgtcacaaaaaatggaacgcttgcatggactccggaagatggtcga
gttactatacatccttctagtgtaaatgataaagtcaagcaagttcctagtcagtttatt
acatattttacgaaacaacgatcaactgcagtatatttacatgacactacatgtgttacc
gttccgattctcatatttgctgctccgaatatctgtataaaagtagaaaaaggaaatttc
gttattactttgccaagttttcaaacttttccttgcgaccaacgaactgcacaactcatt
cagaaactacaagatcagtttaataatatgttagaatataaaattacacatccaggaaca
gtaacctggaataattacgaaggcgacctactaaatgcgattatcgatgtggtctgccaa
acaaatgagagtatgggattttccaaatctaatgttcaagaacagagaaataatacgtat
gatgatgtttga
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