Osmia bicornis bicornis (red mason bee): 114878364
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Entry
114878364 CDS
T06109
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03013
Nucleocytoplasmic transport
obb03015
mRNA surveillance pathway
obb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
114878364
09122 Translation
03013 Nucleocytoplasmic transport
114878364
03015 mRNA surveillance pathway
114878364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obb03019
]
114878364
03041 Spliceosome [BR:
obb03041
]
114878364
Enzymes [BR:
obb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
114878364
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
114878364
Spliceosome [BR:
obb03041
]
Complex C
Other components
EJC/TREX
114878364
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
114878364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
114878364
NCBI-ProteinID:
XP_029047941
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQVVDGSGDIPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaatgatgatcttttggattatgaagatgaggaacaaaccgaacaagtagtc
gatggaagcggggacatacctgctaagaaagaagttaaggggacatatgtatctattcac
agtagtggatttagggattttcttctgaaacctgaaatattacgtgcaattgttgactgt
ggttttgaacatccttctgaagtacagcatgaatgtattcctcaagcagtgcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaacagctgtatttgtattagcaaca
ctgcaacaattagagttaactgaaaatcaagtttatgttcttgtaatgtgccacacgcga
gaacttgcttttcaaattagcaaggaatatgaaagatttagcaagtacatgcctcatgta
aaggttggagtattctttggtggcttgccaattcaaaaagacgaagaagtattaaagaac
acatgccctcatattgttgtgggtacaccaggtcgtatcctcgctctcgtacgaaataaa
aaattaaacctaaagcatttgaaacactttattcttgacgagtgtgataaaatgcttgaa
ttgttagacatgcgtagagatgtacaggaaatatttagaagcactccacacggcaagcaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaatttatg
caagatcccatggaagtctatgtggacgatgaagcgaagctcacattacatggtctacaa
cagcattatgtgaaactaaaagaaaatgaaaagaacaagaagctatttgaattacttgat
gttcttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgtatggctttg
gcacaactattgaccgaacaaaattttcccgccattggtattcatagaggaatgactcaa
gaagaacgattatcgagataccagcagttcaaagattttcaaaaaagaattcttgtagct
acaaatttgttcggacgtggcatggatatcgaacgtgtaaatatagtattcaattatgat
atgccagaagattcggacacatacttacatcgtgtagctagagctggtcgttttggtact
aagggtcttgcaattacattagtcagtgatgaaagtgacgctaaaatattaaatgacgta
caagaacgatttgatgttaatatcacagaattaccggatgaaatagatttagcttcatat
attgaaggacgataa
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integrated database retrieval system
