Osmia bicornis bicornis (red mason bee): 114879397
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Entry
114879397 CDS
T06109
Name
(RefSeq) cleavage and polyadenylation specificity factor 73
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114879397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obb03021
]
114879397
03019 Messenger RNA biogenesis [BR:
obb03019
]
114879397
Transcription machinery [BR:
obb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114879397
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
114879397
U7-dependent histone pre-mRNA processing factors
114879397
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Gp58
Motif
Other DBs
NCBI-GeneID:
114879397
NCBI-ProteinID:
XP_029050120
LinkDB
All DBs
Position
Unknown
AA seq
686 aa
AA seq
DB search
MAAKRKPEAQVPAEESDLLSIRPLGAGQEVGRSCIMLEFKGKKIMLDCGIHPGLSGMDAL
PFVDLVEADEIDLLLISHFHLDHCGALPWFLQKTSFKGRCFMTHATKAIYRWLLSDYIKV
SNIATEQMLYTESDLETSMDKIETINFHEEKDVFGIKFWAYNAGHVLGAAMFMIEIAGVK
ILYTGDFSRQEDRHLMAAEIPNIHPDVLITESTYGTHIHEKREDREGRFTNLVHEIVNRG
GRCLIPVFALGRAQELLLILDEYWSQHPELHEIPIYYASSLAKKCMAVYQTYVNAMNDKI
RRQIAINNPFVFKHISNLKGIDHFEDIGPCVVMASPGMMQSGLSRELFESWCIDAKNGVI
IAGYCVEGTLAKTILSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRILKPPH
VVLVHGEQNEMGRLKAALQREYEDDPNTTMEIHNPRNTVAVELYFRGEKTAKVMGTLAME
TPKPGQTLSGVLVKRNFNYHMLAPCDLSKYTDMSMSQVIQRQSVYFSASLPVLKHLLTQI
AGNLEIVDDKKLRVFKNIDVTIDGKIVTMEWIATPVNDMYADSVLTAILQAEMMEQPPKV
LPAPTKMDRMHFKECLIEMLQEMFGEDSVPKIFKGEKLYVTVDGKKAHIDLLNLEVTSKE
DEIFQQIVQTAVTKLHQSLAPPCDTI
NT seq
2061 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgaaacgaaaaccagaagcacaagtgccagctgaagaaagtgatttattatca
attagaccacttggtgctggtcaagaagtaggcagatcatgtattatgttagaatttaaa
ggaaaaaaaatcatgttggactgtggtattcatcctggtttatctggaatggatgcacta
ccatttgtagatttagtagaagcggatgagatagatttacttttaatttctcattttcat
ttggaccattgtggagctttaccttggtttctacaaaaaactagttttaaaggacgatgc
tttatgactcatgccactaaagctatttatcgttggctgttgtctgattatatcaaagtc
agcaacattgctacagaacaaatgttatatactgaatctgatctagaaactagtatggat
aaaatagaaacaattaattttcatgaagaaaaagatgtctttggaataaaattctgggcc
tacaatgctggtcatgtattaggtgctgctatgtttatgatagaaatagcaggtgttaaa
attctatatactggagactttagtcggcaagaggatagacatttgatggctgctgaaatt
ccaaacattcatccagatgtgttaattactgaatctacttacggtacacatatacatgaa
aaaagagaagatcgtgagggaagatttacaaatttagttcatgaaattgttaacagagga
ggaaggtgtttaatacctgtatttgcattaggaagagcacaagagcttctccttattcta
gatgaatattggagtcaacatcctgaactacatgaaattcctatatattatgcttcttct
ctagcaaaaaagtgtatggcagtctatcaaacttatgtaaatgcgatgaatgataaaatc
aggagacaaattgccatcaacaatccatttgtatttaaacatatttctaatctaaaagga
attgatcattttgaagatattggtccgtgtgtagtaatggcatctcctggtatgatgcag
agtggtttatcaagggaattgtttgaatcctggtgtatagatgcaaagaatggagttata
atagctggttattgcgtagaaggaacattggcaaaaacaattttatcagaacctgaagaa
atcacaaccatgtctggacagaaattaccattaaaaatgtctgttgattatatatcattc
tcagcccatactgattaccaacagacttctgaatttatacgtattttgaaaccgccacat
gttgtgcttgtgcatggagagcaaaatgaaatgggaagattgaaagctgctttacagcgg
gaatatgaggatgatcctaacacaacaatggaaatacataatcccagaaatacagttgct
gtggaattgtactttagaggagaaaaaactgctaaagtgatgggcacattagcaatggaa
acacctaaaccaggacaaacactatcaggagtgttagttaagagaaacttcaattatcat
atgctagcaccttgtgacttatcaaaatatacagatatgagcatgagtcaagtaattcaa
aggcagagtgtatatttctcagcatcgctaccagtattaaaacatcttctaacacaaatt
gctggaaatttagaaattgttgatgataagaaattacgtgtgtttaaaaatattgatgtt
acaattgatggaaaaattgttaccatggaatggatcgcaacacctgtaaatgatatgtac
gcagattctgttctaactgcaatattacaagctgaaatgatggaacaaccacctaaagta
ttacctgcacctacaaaaatggatcggatgcattttaaagaatgtttgatagaaatgctt
caagaaatgtttggtgaagattctgttcctaaaattttcaaaggagagaaactgtatgta
acagttgatgggaagaaagcacatatagatttattaaatttggaagtaaccagtaaagaa
gatgaaatttttcaacaaatagtacaaactgcagtaacaaaactacatcaatcgttggca
ccaccttgtgatacaatataa
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