Osmia bicornis bicornis (red mason bee): 114879843
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Entry
114879843 CDS
T06109
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
114879843
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obb03019
]
114879843
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
114879843
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lipase
DNA_pol_A_exo1
PMC2NT
HRDC
Abhydrolase_6
Abhydrolase_1
LIDHydrolase
DUF900
Thioesterase
Hydrolase_4
Lipase_3
Motif
Other DBs
NCBI-GeneID:
114879843
NCBI-ProteinID:
XP_029051006
LinkDB
All DBs
Position
Unknown
AA seq
1253 aa
AA seq
DB search
MDPTEDWNGDCQTSSENQTQENEREEVQQIIPGYANFRDYLQESFDVIRAGIKAANNLPI
GSDFRYYSCFPSFVNAKDRNVKRTLSVMQCVMATAGVKNNISNRAVDEKFDLLLETNDIL
LDRANELMDKESGITRSSEVELVVTHANKQVVNGSWNSEICRPPQPAENAQSVRLLAGRN
VQRPQLMFKDKIDNRPKPWCPKIKDKPNSLKPLSIYVEEGENGEVFSHPYEYELDMFSPP
ANQLQKSQPAKYKSLEETPLVIIENSIDIKLLLEDLKRYKEIAVDLEHHSYRSFQGITCL
MQISTGDTDYLIDTLSLRSELHELNEIFTKPSILKVFHGADLDIQWLQRDLSLYIVNMFD
THQAAKQLNLPYLSLAYLLKQYCCIDPNKHFQLADWRIRPLPEELQKYAREDTHYLLYIK
DILRNALIDLANGQMNILKSVYDRSTDICRKTYIKPIWTEESCMSIYRKSQKMFNNKQLY
ALIELHKWRDTTAREEDDSTAYVLPNHMLMNIAETLPREMQGILACCNPIPPLVRQNLLK
LHKIILKAREQPLIKPVLGDLRQRSNQRSQMSNSEAWMYSPHDIPNDMEARADLPCLLDN
VNVVETPLATIKHRVTVFDSPATSEDEGTLKNQKNIKKKKFIFVSPFERYKRVIPVVAEE
EAREREKQKQEDEERLEKLKHTEAEIAESKKRVLEHFKQISQDRPETAPKKPSKTPLSQM
KGFKRKRGSDIDKEKATQEQNMQESIVRFQNNNVTNSIRSRKKGEKKRVIKDLNKQHMMP
SKRFDYKAVDFSSFQGGSKNVPGQGKQVNFEQKVPKKEFVVARDLDKMILFVLLFIKLSL
LSTVHSQVLKKSADISFNYTDENSLISNSYNLSNFLFTPVEFPTRAGADFEPHQVDCLGL
GKTVATALEWFFMSKPNGSNALNVQFLLSSRKQPNPVEVIIGKQFGLEWTDFQIVRKTVI
IVHGFLSHGQEPWISSMAKSFLQWGDVNVVVVDWSSGSNTWNYYKAAVNTEVVGYQISRF
LEHIENATSTENNWGPLHLVGHSLGAHICGFAAKELKKRQSKWKIERITGLDPAQPCFKN
ADSTVKLHKSDAPFVDIIHTNGKLLSEIGLGLPQPIGHVDFYPNGGRRQPGCGNMNSSYF
EYLPIPIADIKSSICSHGRSYIYLTESLMSDVKKNCTFWAHYWDLSFRSLKQLVRESCNR
NVCTEMGINAINYSQRGTFFVATSDSVPFCNNNTRITDTIIMMGSDHVDLLDD
NT seq
3762 nt
NT seq
+upstream
nt +downstream
nt
atggatcccacggaagattggaatggcgattgccaaacatcgtcggaaaatcaaacgcaa
gaaaatgagagggaggaagttcaacaaatcatacccggctatgcaaattttcgcgattac
cttcaggaatcgtttgatgtaataagagctgggattaaagcggccaataatttaccaatt
ggatcggactttcgttattattcctgtttccctagttttgtcaatgccaaagatcgaaat
gtaaaaaggacgttaagcgttatgcagtgcgttatggccactgcgggtgttaaaaataat
atttcaaatcgagccgttgatgaaaagtttgatcttttgttagaaacgaacgatatcctt
ctggacagagctaatgaattaatggacaaagaatctggtattaccaggagttctgaagta
gagttagtggtaacgcatgcaaacaagcaggtagtaaatggaagttggaacagtgaaatc
tgtcgaccgccgcaacctgcggaaaacgctcagtctgtacgcttgctggcaggtaggaat
gttcaaagacctcagctaatgttcaaagacaaaattgataaccgtccgaaaccatggtgt
cccaagattaaggataaacctaactcgttaaaaccgttatctatttacgtggaagagggt
gaaaatggtgaagtattcagtcacccttatgaatatgaattggatatgttttcacctcct
gctaatcagttacaaaagtctcaaccggcaaagtataagtccttggaagaaacgccgtta
gtaataattgaaaattcaatcgatattaaattattactagaagacttgaaaagatacaaa
gaaattgctgtagatttagagcatcactcttatagaagcttccaagggataacttgctta
atgcaaatttcgaccggagatacagattatttgatagatactctgtcgttgcgttccgaa
ctacacgaattaaatgagatttttactaaaccatcgattctgaaagtgtttcacggagcc
gatttagacattcagtggctccaaagagatctgtctctttatatagtaaatatgtttgat
acgcatcaagcggcgaaacaactgaatctgccgtatttaagtttagcgtatttactgaaa
cagtactgttgcatagatcccaacaagcacttccagttggctgattggcgtataagaccg
ttaccggaggaactgcaaaagtatgctagagaggacacgcattatttattgtatataaaa
gacattttgaggaatgctttgatagaccttgctaatggacagatgaacattttgaaatct
gtttatgatcgaagtaccgacatttgtagaaagacttacataaaaccaatatggacagag
gaaagctgtatgagtatatacagaaagagtcaaaagatgttcaataataaacagctttac
gccctaatagagctacataaatggagagatactactgcaagagaagaagacgatagcact
gcttatgttttgccaaatcatatgttaatgaatatagccgaaacattacctcgtgagatg
caaggaattttggcgtgttgtaatcctattcctcctttggttagacaaaatttattaaaa
ctacacaagataatactgaaagctagggaacaaccacttatcaaaccagttcttggagat
cttaggcaaagatcaaatcagagaagtcaaatgtcaaattcagaagcctggatgtattcc
cctcatgatattccaaatgatatggaagctagagctgatttaccgtgtctattagataac
gttaatgttgtagagacgccactcgctacgataaaacatagagtaactgtatttgatagt
ccagctacatctgaggatgagggaacattaaagaatcagaaaaatattaaaaagaaaaag
tttatctttgtcagtccgtttgaacgatacaaacgcgtaatacctgtggttgcggaagaa
gaagcgcgtgaaagagagaaacaaaagcaggaagatgaagaacgtttagagaaactgaag
catactgaagcagaaatagcagagagtaaaaaacgagttcttgagcatttcaaacaaatc
tctcaagatagaccagaaactgcaccgaagaaaccatctaaaactcctttgagtcaaatg
aagggatttaaaagaaaaagaggttcagatattgataaagaaaaagcaacgcaagaacaa
aatatgcaagaaagtatcgttagatttcagaataacaacgttactaattcaatacgatcg
cggaaaaagggggagaagaaacgcgttattaaagatttgaacaagcagcatatgatgccg
tcaaaaagattcgattataaagcagtagattttagtagttttcagggcggtagtaaaaat
gtcccgggtcaaggaaaacaagtaaatttcgaacaaaaagtgccaaaaaaagagtttgtc
gtagctagagacttagataaaatgattctttttgtattacttttcattaaattatcctta
ctttctactgtgcatagccaggttttgaagaaaagtgcagatataagtttcaattacacc
gatgaaaattcattaatttcgaatagttataatttatcgaactttctgtttacgccagta
gaatttcctacacgtgctggagcagattttgaaccacatcaagtagattgtttaggccta
ggaaaaacggtagccactgcattggagtggttttttatgagtaaaccaaatggatcaaac
gctttgaatgttcagtttttattatcttcaagaaaacagcctaaccctgttgaagtaatt
attggtaaacagtttggtttggagtggacagattttcaaattgtacgaaaaacggttata
atagttcatggatttttatcacacggtcaagaaccatggatcagtagtatggcaaaatcg
tttcttcaatggggtgacgtaaatgttgtagtcgtagattggagttcaggcagtaatact
tggaattactacaaagcagcagtcaatacagaagtagtgggatatcaaatttcaaggttc
ttagaacacattgaaaatgcaacaagcaccgagaataattgggggccactccatttagtt
ggtcacagtttaggagcacacatttgtggatttgctgccaaagagttgaaaaaaaggcag
agcaaatggaaaatagaaagaataacaggtttggatccagcgcaaccttgttttaaaaat
gcagactcgactgtaaaacttcacaaatctgatgcgccattcgttgatatcattcacact
aacggcaaattgctttctgaaattggattaggtttaccacagcctataggtcacgttgat
ttctatcctaacggtggcagacgtcaacccggttgcggaaacatgaactcgtcgtatttt
gaatacttaccaattccgatagcagacattaagagttctatatgtagccatggacgttca
tatatctatctaacagaatcgttgatgtccgacgttaaaaagaactgcactttctgggca
cattattgggatttatcgttccgaagcttgaagcaattggttagagagtcttgtaacaga
aacgtttgcaccgaaatgggcataaacgcgatcaattattctcaacgcggaacgtttttc
gttgccacatcggatagcgtgccattttgcaataacaatactcgcataacagacacgata
atcatgatgggatcggatcacgtggacttactggatgattga
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