Osmia bicornis bicornis (red mason bee): 114881071
Help
Entry
114881071 CDS
T06109
Name
(RefSeq) cartilage oligomeric matrix protein isoform X1
KO
K04659
thrombospondin 2/3/4/5
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb04145
Phagosome
obb04512
ECM-receptor interaction
obb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114881071
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
114881071
09142 Cell motility
04820 Cytoskeleton in muscle cells
114881071
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
obb04131
]
114881071
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obb04147
]
114881071
00536 Glycosaminoglycan binding proteins [BR:
obb00536
]
114881071
Membrane trafficking [BR:
obb04131
]
Endocytosis
Phagocytosis
Opsonins
114881071
Exosome [BR:
obb04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
114881071
Exosomal proteins of colorectal cancer cells
114881071
Exosomal proteins of bladder cancer cells
114881071
Glycosaminoglycan binding proteins [BR:
obb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114881071
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TSP_C
TSP_3
EGF_3
EGF_CA
COMP
Motif
Other DBs
NCBI-GeneID:
114881071
NCBI-ProteinID:
XP_029053542
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MRVFMTFIVVILFVVCVGCSVTPDTELTSSLRETWDNDFVIAISNIKSKKKPLEAAVETL
LAVKYGKFRTKIVLMLNRRSKRVILENIDEDGHRTAEHINLDLSNVHLPMKDIIFIVHQN
PPDARMDIYIDCVYQGVIPLKRTFNMLADNEGNLLVEALRERRSQVKVYPLLSTIDTLKQ
ENCPNNLADMDTLSDFMKSKRSYKSNLKSNHKEPNDFDEYSFNLDRPGFNHHFSSKGHTH
RFSTESDMFENDSQFDFEELKKLESLKQPHGLNHNHQSTRRGQLNRHDQYVVKDDRNKHL
TGDFSGNFERLHQSEFLDGSFRAKSGEFNHSDESDLLNQSNVNYIRIPRRGDIGIQSLDE
RTCLTDNQIVKTLNELIEATKKVWREIELNRLETQHLRQLIETCAACRVPPVPSTTTTAA
PLPSCDYKSPCFPGADCRNTPYGPQCGACPPRYTGDGYRCVKAVVTCTNNPCFHGVRCYD
RADGYSCGKCPSGYVGDGKHCERRWNGCESNPCYAEVECESVIYPPYYRCGSCPNGYIGN
GSTCLDLNECEVAQPCHPGVRCINLRPGFRCEPCPPGFTGSAIEGVGLDIARSRKQVCHD
INECEINNGNCNPYMECINTEGSYRCGPCRVGFVGNQTVGCHPKHSVCPDLVTVCDVNAE
CNCIDTNLYICRCRIGWAGNGLVCGIDRDSDGIPDRNLRCHDRRCQIDNCPETPNSGQED
ADGDGLGDACDPDADNDGVLNPSDNCPLVSNPGQEDNDRDGPDSVGDVCDNCPAIRNPKQ
EDVDDDGIGDACDKDIDNDGIMNLQDNCPRKKNWDQTDTDMDRIGDACDNCPYDRNTDQL
DRDGDGVGDVCDNDNDRDRDGVQDDRDNCPDVANPGQNDDDRDGIGNECDPDIDNDGIPN
NQDNCPYVYNPNQRYAHSNKNIGDACWNDNDNDTVINSNDNCPNNSLIWTTDFRKYTTIA
LDPVGTAQEDPLWRIHNEGAEIQQLVNSDPGIAIGPDVFSGVDFEGTFFVDDDGDDDSVG
FVFSYQDNHRFYIVSWKKGQQPYWMPTPFRAVGDPGIFLKLVDSTTGPGELLRNSLWHNE
DTPNQVKILWHDPKKIGWKERTPYRWQLLHRPRIGLIRFRLYQGKQLMADSGNVYDSTLK
GGKLGVYCFSQEKITWSNLLYMCKETVPQSVWNELPANLKKDVAVDISKDVRAHYATQSN
YYSSP
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgttttcatgacgttcattgtcgtgatcctctttgtggtttgtgtcggttgcagc
gtcacacctgatacagagttaacatcaagtcttcgagaaacatgggacaacgacttcgtg
attgctatttcgaacatcaaatcaaagaaaaaaccattagaagcagcggtggagaccctt
cttgctgtaaaatatggaaaattcagaacaaaaatagtgttgatgctcaacagacgatcg
aagcgagtaatcctcgagaacatcgatgaagatggtcaccgaactgccgagcacataaac
ctggatctttcaaatgttcatttaccaatgaaggatataatcttcatagtgcatcaaaat
ccacccgatgcacgaatggacatctacattgattgcgtttatcaaggtgttataccatta
aagagaaccttcaacatgctagcagataatgagggaaatctacttgtagaagcgctcaga
gaaagaaggagccaagtgaaggtatatccacttttatccaccatcgacactctcaagcaa
gaaaattgccccaacaatttggccgatatggatactctatccgatttcatgaaatctaaa
cgatcctacaaatcaaatttaaaatctaatcacaaagaaccaaacgatttcgacgaatat
tccttcaaccttgacagacctggtttcaatcatcatttttcatcaaaaggacatacacat
cggttcagtaccgagtcagatatgttcgaaaacgacagccaatttgatttcgaagagtta
aagaaattagagagtttgaaacaacctcatggattgaatcacaatcatcaatccactcga
cggggtcaattgaatcgacacgatcaatacgttgttaaagatgatcgtaataaacatttg
acgggtgacttctcgggtaactttgaacgtttgcatcaatctgaattccttgatggatcg
ttccgtgctaaatctggagaatttaatcattcggacgaatcagacctgttgaatcaatct
aacgtgaactatattagaattccaagaagaggagatattgggattcaaagtctggatgaa
agaacctgtttgacggacaaccagatagtcaaaacactaaacgagctgatcgaagctact
aagaaggtctggagagaaatagaattgaatagattggaaacgcaacaccttcgacaatta
atcgaaacttgcgcagcctgtcgtgtaccccccgttccatcaactacaacgacggcagct
cctcttcctagttgcgattacaaatcaccctgcttcccgggggctgactgccgtaacaca
ccatacggcccacaatgtggagcttgcccaccacgttacactggcgatggatatcgttgt
gtgaaagccgtcgttacttgcacgaacaacccttgctttcacggtgttcgttgttacgac
cgtgcggatggatacagttgcggaaaatgtccttccggttacgtaggggacggcaaacac
tgcgagcgacgctggaatggttgcgaatccaacccttgttacgcagaagtggaatgcgag
tctgtcatttatccaccctattacagatgtggctcctgccccaatggatacattggtaac
ggttctacctgtcttgatttaaacgagtgcgaagtggcacaaccttgccaccccggcgtt
cgatgcatcaatctccgtcctggtttcagatgcgaaccttgtccaccaggatttactgga
tctgcgatagagggtgtaggtttagatatagccagaagtcgtaaacaagtttgccatgac
ataaacgagtgcgaaattaacaacggaaattgcaatccatacatggaatgcattaataca
gagggttcatacagatgcggtccttgtagagtgggttttgtagggaatcaaacagttggc
tgccatcctaagcacagtgtttgtccagatttagtgactgtgtgtgacgtgaatgctgaa
tgcaactgcatcgacactaatctgtatatttgcagatgccgtatcggatgggctggaaat
ggactggtctgtggcatagacagggacagtgatggtatccctgacagaaatcttcgttgc
catgatcgacggtgtcagatagacaactgcccggaaacgccaaacagtggacaagaggat
gcagacggtgatggtttaggcgacgcgtgcgatccagatgccgacaacgatggtgtacta
aatccttcggacaactgtcctttggtctcaaatccgggtcaggaggataatgatcgggat
ggtccagactcagttggagatgtttgcgacaattgtccggcgattagaaatcctaagcag
gaggatgtggatgatgacggcattggtgatgcctgtgacaaagacatcgataacgatggt
atcatgaacctgcaggacaactgtccgagaaagaaaaactgggatcaaacagacacggac
atggacagaataggcgatgcttgtgacaactgtccatacgatcgtaatacagaccaattg
gaccgagatggcgacggtgtaggtgacgtctgcgataacgacaatgacagagatagagac
ggggtgcaagacgacagagataattgtcctgatgtggcaaatccaggacaaaacgacgat
gatcgggatggcataggaaacgagtgtgaccctgacattgataacgatgggatacctaat
aatcaggataactgtccttacgtctacaatccgaatcaacgttacgctcactcaaataaa
aatattggcgatgcctgttggaacgacaatgacaacgacaccgtgataaatagcaatgac
aactgtcccaataacagtttgatttggacaacggatttcagaaaatatacaacaattgct
ttagaccctgttggtactgctcaggaggaccctctttggaggatacacaacgaaggcgct
gaaatccagcagctcgtgaacagtgatcccggaattgctattggcccagacgtttttagt
ggcgtagactttgaggggacgtttttcgttgacgacgacggagatgatgactctgttggc
ttcgtcttttcttatcaggataaccataggttttatatcgtgtcttggaagaaaggacag
cagccctattggatgccaaccccgttcagagcagttggagatccagggatctttcttaaa
ctcgtcgactcaaccactggtccgggagaacttctcagaaacagtctctggcataacgag
gatactcctaatcaggtgaagatcctttggcacgatccgaagaaaattggctggaaagag
agaactccatacaggtggcaactcttacatagaccaagaattggtctgatcaggttccga
ctttaccagggcaaacaattaatggctgattctggaaatgtttatgactcgaccttgaag
ggtggaaaactcggtgtttattgcttttcacaagaaaagatcacttggtcgaatctactg
tacatgtgcaaagaaactgtcccacaatcagtttggaacgagttaccagcgaatttgaag
aaagacgtggccgtggacataagtaaagatgttagagctcactacgccacacaatctaac
tattacagctcgccttaa
DBGET
integrated database retrieval system
