Osmia bicornis bicornis (red mason bee): 114883201
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Entry
114883201 CDS
T06109
Name
(RefSeq) uncharacterized protein LOC114883201 isoform X1
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
obb
Osmia bicornis bicornis (red mason bee)
Pathway
obb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
obb00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
114883201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obb03021
]
114883201
03019 Messenger RNA biogenesis [BR:
obb03019
]
114883201
Transcription machinery [BR:
obb03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
114883201
Messenger RNA biogenesis [BR:
obb03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
114883201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pcf11_helical
CID
Pfc11_Clp1_ID
Pcf11_C
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
114883201
NCBI-ProteinID:
XP_029056597
LinkDB
All DBs
Position
Unknown
AA seq
1903 aa
AA seq
DB search
MMSTKSKEIADEYISSLSDLTINSKPLINMLTMLAEDNMEHAPAIVQAVENHLQKVRSDI
KLPVLYLIDSIVKNVNGAYLNLFTQNIVNTFCGVFEKVDENTRASMWKLRQTWNDVFPAK
KLFSLDVRVQSIDPAWPITASPTSVSSGSIHVNPRFFSMPQQSTPAIVPPPIVAPVKLPP
GDPVTPTEAAMREQLLKKQRELIELQKKKIELELLQAKANLEQQQRQLDKQAGNLKAELA
TATTHVTPTTETITQGKPVASTTPTPAPKQVAKQFPAATASLLKNAGTNNGPRIAPASSI
AVASAKPVSRDPRLKTTTTSAQDVPVTCVDPRQRISTPTQKDSRGEGHTQLAANTNTVLS
DQLKQQLLSKQAVTSTINKSPTNLAGSDTATINASNNNNANTNLNINNNNKNFSGNANKD
AVSHRTSQKKDPRLSSNSSGNLNSNSSKGSQNLSVGSNSSLSASNRGGGSNDSKSKDSKS
TNSRSTSSSSIDKSSTSSKSSHRKPGNKSRSKQPQTSPNKIPKIDRDASPVRSKSREKDS
GDSSPSLRTSPQSFQTSKNRKKNTKSRKRSPSPPYRIPRRNDSKSNSSLSSSGGVTEEEQ
SGSLIVSPPHPPTFKEIRPNARQRNYVRRNKDGSLSPVRSPANAGNVQTSAEPTLESSSK
DEDLRATLPIPTATASVTEKKEDLDLRVLPPPVNTNKRQSSEHMESTSAKKTKAEKFDAL
FGNEDVDLRTLTHPKAGRPPTPPPPVISGEDGKDGWAKLKTPSKNDREKQANNADDKRDS
RDRNRDRLGRLRLYNKLPDDPKERRRTLSNEDQDGRSGRRGRENDKPEKNEDRNIEIIMK
QAAEQLNQGSITKTQYNTLIQEVLHMSEDRKLRAAQRKEKEVGSIVWEKGVNLDIAGQAD
RSTTFSPSNDKEILRNKDHPIPRNLNSPRWQNQPWQQQPGPWAHPPGPPYGGGPQGHFNS
DFRPVGPWQNPRHFGPMRPDYQYHGGFNTIGPNPRLGPGMMGPIGPNGPLMSNILSNGPI
ASMSMPNPISLSGMNGPGMLMNNGPISNLISNTSISSSLNASRNVSPNSSSKYDLEDNDQ
NYTTTMMKNQNPHSRELPPPDTKLLDEIARDTMKSINIDSIPREIRYYGQTGVVFMNWDD
PREIGFQDGIRRILIDDKDTITCAFNDQYKEFMYEGEVHRIKLGAPTRELYVDDRWYECY
FGGMPVTVDLGGKKVSVKLEGPPPHVKIGTVKRTDLVVAKINLIINARNMVPVFLDSKPQ
IFEIEGKPHTLEFIDSLQTVLLNGRPFKVEFGGLPKPIIVRDKKHFIRFSVLPRGVRPGY
VKIAGMKGEEPIESPPTPPLMAQKPKVDSTSAPAQFSSIEPESTSQDGSDLRSTPKPDLQ
LDMLSSVLPSAMAPASGLSYQAEPVENPPTTAPALSLPLNMNELFQRLVETGIVPNLSEP
KKQEEEEKKEPEIIPVSFDKPETLKVKQPAIAAALYSGMQCSSCGARFAPELATRYSHHL
DWHFRQNRRERDSARKAHSRPWYYDVSDWIQFEEIEDLEDRAQSWFETEKQTADTEGIAA
EDSPQEALQPSVPTGSDEDSRCQVCHDAFEQFYNEEKEEWHLRPSINFEGKNYHPLCLDD
YKEKSLVRALEKSALALEETIEEMEDEKKENSDEMSAEENKTDELTVEGLNTEFETVEPS
SGIAEDNVSQEMFEMENVEEPTITDKLEQAEKAEEQELESSSKETDEHTEKDVASTKIEM
DAPETENVDKSFENIKIKEEPLDEPEEQPEEEQFDFSNVEIKEEPVDAEPEPEESIISEP
AAVDTTYAAVKSSIDGNVELDSTPATMPAAPSRIKINITKPLCINKEPEESKEKEKPVVE
TPAEEIIEPLVPASIKPALQGRKLSVLPPVERGKELSGLCSIM
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcaacaaagtctaaggagatagctgatgagtacatctcatctttgtctgatctg
acgatcaacagcaaacctttgattaatatgcttacaatgttagcagaggacaacatggaa
catgctccagcaattgttcaagctgttgaaaatcatctacaaaaggtgagaagtgacatt
aaattacccgtgctttatttgattgattcaattgtgaagaatgttaacggggcatatttg
aatctcttcacacaaaatattgttaatactttttgtggagtgtttgaaaaggtggatgaa
aatacaagagccagcatgtggaaattaagacaaacatggaacgatgtattccctgcaaag
aaattattttccttggatgtacgggtacaaagtattgatcctgcttggccaatcactgcc
tctcctactagtgtttcttcaggatctattcatgttaatcctcgtttcttttcaatgcct
cagcaatcaaccccagctattgtaccaccaccaattgtagcacctgtgaagttaccaccg
ggtgatcccgttacgcccacagaagcagcaatgcgagaacagttattgaaaaaacaacgg
gagctaatagaattacaaaagaagaagattgaattggaactccttcaggctaaagctaat
ttagaacagcaacaacgacaactggataaacaagcaggaaatttgaaagcggaattggct
acagctacaacgcatgttacaccgactacggaaactatcactcaagggaaacctgttgca
tctactacaccaaccccagcaccaaagcaagtagcaaaacagtttccagcagcaactgct
tcgcttctaaaaaacgcaggaacgaataatggtccccgaattgctccagctagtagtata
gcagttgcctcagctaagcctgtatctcgtgatccaagactaaaaactactaccacttcg
gctcaagatgtaccggttacgtgtgtggatcctcggcagcgaataagtacaccaactcag
aaggattcgcggggtgaaggccatacgcagttagcggcaaatacaaacactgtactttca
gatcaattaaaacagcagttactttcgaaacaggctgtaactagcactatcaacaagtct
ccgacaaatcttgccggctccgatactgcgacgataaacgctagtaataacaataatgct
aatacgaacctcaacataaataataacaataaaaatttcagtggtaacgcaaataaagat
gctgtgtcgcatcgaacaagtcaaaagaaagaccctcgattgtctagtaatagtagtggt
aacctaaacagtaatagttccaaaggttctcaaaatttgtctgtgggtagtaatagttct
ttatcagcgagtaacagagggggtgggagtaacgattctaagtcgaaagattcaaagagc
acaaattcacggagtacttcgtcttcgtcaatcgataaatcttccacttcctcgaaatcc
tcgcataggaagccaggtaacaagtcgcgatctaaacaacctcaaacatccccgaataag
ataccgaaaatcgaccgagatgcaagccctgttaggtcgaaatctcgtgaaaaagacagt
ggagacagttcaccatccttgcgtacttctccccaatcctttcaaacctctaaaaatcga
aagaagaatacaaaatccagaaaacgcagtccaagccctccgtatagaattcccaggcgt
aacgattcaaaatcaaattcaagtctaagcagttccggtggtgtcaccgaggaggaacaa
tctggttcattaatagtatctcctcctcatccgcctacgtttaaagaaatccggccgaat
gctagacagagaaattatgtaaggcgaaacaaggatggcagtcttagccccgtacgctct
ccagcgaatgctggaaacgttcaaacttcagcggaaccaactttggaatcatccagtaaa
gacgaagatttgagagcaactctacctattccaacggcaactgcttcggtaacagaaaaa
aaagaggacttagatctgcgcgtattgccaccgccggttaataccaacaaaagacaaagt
tctgaacatatggaatcgacttcggctaagaaaacgaaagctgaaaaatttgacgcatta
tttggaaacgaagatgttgatctgcgaacgttaactcatcctaaagctggacgaccacca
acacctcctccgcctgtgatatctggcgaagatggcaaagatggttgggcaaaactgaaa
acaccgtcgaagaacgatagagaaaagcaagctaacaatgccgatgataaacgagacagt
cgtgatcgtaatagagacagattgggtaggcttaggctttataataaacttccggatgat
cctaaagaaagaagaagaacgttatcgaacgaagatcaagacggtagatccggtcgtagg
ggtcgagaaaacgataagcctgagaaaaatgaagatagaaatattgaaataataatgaaa
caagcggccgaacaattgaatcaaggttctatcactaaaactcaatataatactcttatt
caagaggttttacatatgagcgaagatcgtaaattgagagctgcccaaagaaaagaaaaa
gaagtaggttctatcgtttgggagaaaggtgtaaacttagatatagccggtcaagcggat
cgtagtactacttttagcccttctaatgataaagaaatactaagaaataaagatcatccc
attccaagaaatctgaatagtcctagatggcagaatcaaccatggcagcagcaaccagga
ccgtgggctcatccgccaggaccaccgtacggcggtggtcctcaaggacactttaattca
gatttcagacctgtcggaccgtggcaaaatccaagacattttggaccaatgcgacctgat
tatcagtatcatggtgggttcaatacgattggtccaaatccacgtttaggccctggaatg
atgggaccgataggacctaatggcccgctcatgtcaaatattctatccaatggcccaatc
gcttctatgagtatgcctaatcctatatcgttatcgggtatgaacggacctggaatgctt
atgaataacggaccaatatcgaatcttatatcaaatacaagtatatcttcatcgttgaac
gcatcgagaaatgtttcgccgaattcctcgtcgaaatacgatcttgaagataacgatcaa
aattatactacgacgatgatgaaaaatcaaaatccacatagccgtgaattaccacctcca
gatacaaaattattagatgaaattgcaagggacactatgaaatctataaacatcgacagc
ataccacgtgaaattagatattacggtcaaactggagttgttttcatgaactgggatgat
ccaagagaaattggattccaagatggtatacgacgaattttaatcgatgacaaagatact
attacttgcgcatttaatgatcaatataaagaatttatgtacgaaggtgaagttcacaga
attaaattgggtgctcctaccagagaattatacgttgatgatcgatggtacgaatgttac
tttggtggtatgcctgtaacagtagatcttggtggtaaaaaagttagtgtcaaattggaa
ggacctccaccccacgttaaaatcggcactgtaaagagaacagacttggtagttgctaaa
attaatctaattattaacgcacggaacatggttcctgtatttttggattcaaagccacag
atattcgagatcgaaggaaaacctcatacattggaattcatagattcattacaaacggta
cttttgaatggtcgaccgtttaaagttgagttcggaggattgcctaagccaattattgtt
agggataaaaaacattttataagattttcggtattaccgagaggtgttcgtccagggtac
gttaagattgcaggtatgaaaggtgaagaacctatcgaatcaccgcccacgccaccttta
atggcgcaaaagccgaaagtagattcaacgtctgcaccagcacaattctcttccattgaa
cctgaatcgacgtcacaggatggttcggatctaagatctacacccaaaccggatttacaa
ttagacatgttatcttcggttttaccatcagcgatggcaccagcatctggattatcttat
caagctgaaccggtggaaaatccacctacaactgcgccagcattatcgctacctttgaat
atgaatgagttgttccagagattagttgaaaccggtatcgtaccgaatctttctgaaccg
aaaaagcaagaagaggaagaaaagaaagaaccagaaattatccctgtttctttcgataaa
ccagaaacgcttaaagttaaacaaccggctatcgccgcagcattgtacagtggtatgcag
tgcagttcttgtggtgctagatttgcaccagaactagcaacacggtatagtcaccattta
gattggcatttcagacaaaatagacgagaaagagattctgcaagaaaggctcattcgcga
ccttggtattacgacgttagcgattggatacaatttgaagaaattgaagatctggaagat
agagcacaaagctggtttgaaacagaaaagcaaactgcggatacggaaggtattgctgcg
gaggattctcctcaagaagcgttacaacctagtgttcctactggatccgatgaagattcc
aggtgccaagtctgtcacgatgcatttgaacaattttataatgaagagaaagaagaatgg
catttaagaccatcaattaattttgaaggaaagaattaccatccgttgtgtcttgatgat
tacaaggaaaagagtcttgtgagagctttggagaaatctgcattagcccttgaagaaaca
attgaggagatggaagatgagaagaaagagaactccgatgaaatgtctgcagaagaaaac
aagactgatgaattaactgtagaagggttaaatactgaattcgaaacagtagagccatcg
agcggaatagcggaagataatgtatcgcaagaaatgtttgaaatggaaaatgtagaagaa
cctacgattacagataaattagaacaagctgaaaaagcggaagagcaagaattagaatct
agtagtaaggagactgatgaacacacggaaaaagatgttgcatccacgaaaattgaaatg
gatgcacctgaaacagaaaatgtagacaaatcgtttgaaaatataaaaattaaagaagaa
ccgcttgatgagcctgaggaacaaccagaagaagaacagttcgatttcagtaatgttgaa
attaaggaagaacctgttgatgcagaaccagaacctgaagaaagcataataagcgagcct
gcagcggtggatacgacgtatgctgctgtaaaaagctccatcgatggaaatgtagaattg
gattctacacccgcaacaatgccagctgcgccatctcgaattaaaattaacattacaaaa
ccattgtgtattaataaagaaccggaagaatcaaaggaaaaggaaaaacctgtagttgaa
acacctgctgaagaaataatagaacctttggtgcctgcctctattaaacctgctttgcaa
ggtagaaaactgtctgttttacctcctgtggagcgagggaaagagctatctggactatgc
tcgattatgtaa
DBGET
integrated database retrieval system
