Lacunisphaera limnophila: Verru16b_00020
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Entry
Verru16b_00020 CDS
T04567
Name
(GenBank) hypothetical protein
KO
K02600
transcription termination/antitermination protein NusA
Organism
obg
Lacunisphaera limnophila
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
obg03021
]
Verru16b_00020
03009 Ribosome biogenesis [BR:
obg03009
]
Verru16b_00020
Transcription machinery [BR:
obg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
Verru16b_00020
Ribosome biogenesis [BR:
obg03009
]
Prokaryotic type
rRNA transcription factors
Verru16b_00020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
MRP-S35
S1
KH_KhpA-B
HHH_5
KH_NusA_C
Motif
Other DBs
NCBI-ProteinID:
AOS42984
UniProt:
A0A1D8AQY1
LinkDB
All DBs
Position
complement(15842..17068)
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AA seq
408 aa
AA seq
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MSSEILSVLEYMEKEKGIPRADMISTIVNAIKTAALKGVNSGQELKIEINPKNGQMKAWS
MLKVVDSVSDPKLEIHVEKAQVFKAGAVNGDIIEKEIDPSYLGRIAAQTARQAIMQRLRA
FEKERIYDDFKDSVGDIVSGTVRRRERNDLFIDLGKAEAVMPGKEQVPGEEYAPGERIRC
ILLEIENSSRGPEIILSRASPKFVRRLFELEVTEIADGTVKIEAFAREPGYRTKIAVTSA
DPKVDPVGACVGARGARVKSIVRELGGEKIDIIPYHADTKEMLIEALKPAVPREILLDEK
NKRILVRVVNDDLAVAIGRKGQNARLTSRLVGWRLDIEEFKVVTADPRAQAIALLTGTYG
FEAALAERLVANGINSPAAFEGVEASDLADAGFSPEEAAGIIAKVSGN
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcgaaatcctgtccgtcctcgaatacatggagaaggagaagggcattccccgt
gccgatatgatctccacgatcgtcaacgcgatcaagacggccgccctgaagggcgtcaat
tccggccaggaactcaagattgagatcaaccccaagaacggccagatgaaggcttggtcg
atgctcaaggtcgtggactccgtgtccgacccgaagctcgagatccacgtcgagaaggcc
caggtgttcaaggccggggccgtgaacggcgacatcatcgagaaggaaatcgacccgtcc
tacctcgggcgcatcgccgcgcagaccgcccgccaggcgatcatgcagcgcctgcgcgcc
tttgagaaggagcgcatctacgacgacttcaaggactccgtgggcgacatcgtgagcggc
accgtgcgccgccgcgagcgcaacgacctcttcatcgacctcggcaaggccgaggccgtc
atgccgggcaaggaacaggtccccggcgaggaatacgcccccggcgagcgcatccgctgc
atcctcctcgagatcgagaacagcagccgcggccccgagatcatcctcagccgcgccagc
cccaagtttgtccgccgcctcttcgagctcgaggtcaccgagatcgccgacggcaccgtc
aagatcgaggccttcgcgcgcgagcccggttaccgcaccaagatcgccgtcaccagcgcc
gacccgaaggtcgacccggtcggcgcctgcgtcggcgcccgcggcgcccgcgtcaagagc
atcgtccgcgagctcggcggcgagaagatcgacatcatcccgtaccacgccgacacgaag
gaaatgctcatcgaggcgctcaagccggccgtgccgcgcgagatcctgctcgacgaaaag
aacaagcgcatcctcgtccgcgtggtgaacgacgacctcgccgtcgccatcggtcgcaag
ggccagaacgcccgcctgacctcccgcctcgtgggctggcgcctcgacatcgaggaattc
aaggtcgtcaccgccgacccgcgcgcgcaggccatcgccctgctcaccggcacctacggc
tttgaggccgctctggccgagcgcctggtcgcaaacggcatcaattcccccgccgccttc
gagggcgtcgaggcctccgacctggccgacgccgggttctccccggaagaggccgccggc
atcatcgccaaggtctcgggtaactaa
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