Lacunisphaera limnophila: Verru16b_00044
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Entry
Verru16b_00044 CDS
T04567
Symbol
yfhQ
Name
(GenBank) putative A/G-specific adenine glycosylase YfhQ
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Verru16b_00044 (yfhQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
obg03400
]
Verru16b_00044 (yfhQ)
Enzymes [BR:
obg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
Verru16b_00044 (yfhQ)
DNA repair and recombination proteins [BR:
obg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Verru16b_00044 (yfhQ)
Prokaryotic type
Verru16b_00044 (yfhQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
EndIII_4Fe-2S
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOS43006
UniProt:
A0A1I7PHC9
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All DBs
Position
43034..44071
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AA seq
345 aa
AA seq
DB search
MANPDQLSSRRPAFQAALHGWYRVHQRKLPWRDAPSLYKTVVSEFMLQQTQVVTVLPYFD
RWLRALPDFAALAAAPETQVMKLWEGLGYYSRARNLHRLAQAWVAAPTPPRTPAAWRELP
GIGPYTAAAITSISFDEPAAVVDGNVVRILARLTGENRLFRDGTEAVKFFTPLADALIPG
SHPGTHNQAMMELGATVCFRQKPLCLVCPVAAFCTAFRDGEPESLPRLKPKVIEQRTIAR
LWCVHQGRLLLQRGAAKARRLAGLHELPAADIVGRAPAARDLLVTKRRAITRFQITESIY
AAKLTPALKAAIARDDSLEWVPLQDLGQVTLSGPHRRWITALLAR
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
gtggccaaccctgaccagctttcctcccggcgcccggccttccaagccgccctccacggc
tggtaccgcgtccaccagcggaagctcccgtggcgcgacgccccctcgctctacaagacc
gtcgtctcggaattcatgctgcagcagacgcaggtcgtcactgtcctcccctacttcgac
cgctggttacgcgccctgcccgacttcgccgccctcgccgccgcgcccgagacgcaagtc
atgaaactctgggaaggcctcggctactactcccgggcccgcaacctccaccgcctcgcc
caggcctgggtcgccgcccccaccccgccccgcaccccggccgcgtggcgcgagctcccc
ggcatcggcccctacaccgccgccgccatcaccagcatcagcttcgatgaacccgccgcc
gtggtggacgggaatgtcgtccgcatcctcgcccgcctgaccggcgaaaaccgcctcttc
cgtgacggcacggaggcggtgaaattcttcacgccgctcgccgacgccctcatccccggt
tcgcaccccggcacccacaaccaggccatgatggaactcggcgccaccgtctgcttccgc
cagaaacccctctgcctggtctgcccggtcgccgccttctgtaccgccttccgggacggc
gaacccgaaagcctgccgcggctcaaacccaaggtaatcgagcaacggaccatcgcccgc
ctctggtgcgtgcaccaaggacgactcctcctgcagcgcggtgcggccaaggcccgacgg
ctcgccggacttcacgaactgcccgctgccgacatcgtgggccgcgcaccggccgcccgc
gacctgctcgtcaccaagcgccgcgccatcacccgtttccagatcaccgaatccatctac
gcggcgaaactgactccggccctcaaggccgccatcgcccgcgatgactccctcgagtgg
gtgccgctgcaggacctggggcaggtcaccctctccggcccccaccggcgctggatcact
gccctgctggcacgttaa
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