Lacunisphaera limnophila: Verru16b_00106
Help
Entry
Verru16b_00106 CDS
T04567
Symbol
groL
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
obg
Lacunisphaera limnophila
Pathway
obg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
obg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Verru16b_00106 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
obg03019
]
Verru16b_00106 (groL)
03110 Chaperones and folding catalysts [BR:
obg03110
]
Verru16b_00106 (groL)
03029 Mitochondrial biogenesis [BR:
obg03029
]
Verru16b_00106 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
obg04147
]
Verru16b_00106 (groL)
Enzymes [BR:
obg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Verru16b_00106 (groL)
Messenger RNA biogenesis [BR:
obg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Verru16b_00106 (groL)
Chaperones and folding catalysts [BR:
obg03110
]
Heat shock proteins
HSP60 / Chaperonin
Verru16b_00106 (groL)
Mitochondrial biogenesis [BR:
obg03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Verru16b_00106 (groL)
Exosome [BR:
obg04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Verru16b_00106 (groL)
Exosomal proteins of other body fluids (saliva and urine)
Verru16b_00106 (groL)
Exosomal proteins of breast cancer cells
Verru16b_00106 (groL)
Exosomal proteins of colorectal cancer cells
Verru16b_00106 (groL)
Exosomal proteins of bladder cancer cells
Verru16b_00106 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AOS43067
UniProt:
A0A1I7PHI4
LinkDB
All DBs
Position
complement(121011..122660)
Genome browser
AA seq
549 aa
AA seq
DB search
MAAKQLLFDEAARQKVLRGVEILSRAVKVTLGPKGRNVVIDKKFGSPTVTKDGVTVAKEV
ELPDPYENMGAQMVKEVASKTSDSAGDGTTTATVLAEGIYREGLKNVTAGANPVYLKRGI
DKAVEAAVTELARISKKVNDREEIRQVATVSANWDETIGNIIADAMDKVGKDGTITVEEA
KSIETTLDVVEGMQFDKGYLSPYFVTNAESQEVVQEDAYVLIHEKKISNLQEMLPLLQTV
AKSGKPLLIIAEEVEGEALAALVVNKIRGTLNVCAVKAPGFGDRRKAMLEDIAVLTGGKC
ITEDLGLKLENLTLADLGKAKRLVVDKENTTIVEGGGKSSDIQGRVKLLRRQIDETTSDY
DREKLQERLAKLAGGIAVINVGASTEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RTVKAIEALKLEGDEAFGAQIVRRAIEHPIRMLCTNAGVDSGVVVKEVLAGKANFGYNVA
TGEYEDLVKAGVVDPTKVTRTALQNAASIAGLLLTTECMITDIPEKSAAPAGGGGGGGGG
MGGMGGMDY
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggcagccaaacaactcctgttcgacgaggccgctcgtcagaaagtcctccgcggtgtc
gagatcctctcccgcgccgtcaaggtcaccctcgggcccaagggccgcaatgtcgtcatc
gacaagaaattcggttccccgaccgtcaccaaggacggcgtgaccgtcgccaaggaagtc
gagcttcccgacccgtacgagaacatgggcgcccagatggtcaaggaagtcgcttccaag
acctccgacagcgccggtgacggcaccaccacggcgaccgtgctcgccgagggcatctac
cgcgagggtctgaagaacgtcaccgccggcgccaacccggtctacctcaagcgcggcatc
gacaaggccgtcgaggccgccgtcaccgagctcgcccgcatctccaagaaggtcaatgac
cgcgaggagatccgccaggtcgccaccgtctccgccaactgggacgagacgatcggcaac
atcatcgccgacgccatggacaaggtcggcaaggacggcaccatcaccgtcgaagaggcc
aagtccatcgagaccaccctcgacgtcgtcgagggcatgcagttcgacaagggctacctg
tcgccctacttcgtgacgaacgcggagagccaggaagtcgtccaggaggacgcctacgtg
ctcatccacgagaagaagatcagcaacctgcaggagatgctcccgctgctgcagaccgtc
gccaagagcggcaagcccctcctgatcatcgccgaggaagtcgagggtgaagccctcgcc
gccctggtcgtgaacaagatccgcggcacgctcaatgtgtgcgccgtcaaggcccccggc
ttcggcgaccgccgcaaggccatgctcgaggacatcgccgtcctcaccggtggcaagtgc
atcaccgaggacctcggcctcaagctcgagaacctcaccctcgccgacctcggcaaggcc
aagcgcctcgtcgtcgacaaggagaacaccacgatcgtcgagggcggcggcaagtcctcc
gacatccagggccgcgtcaagctgctccgccgtcagatcgacgagaccaccagcgactac
gaccgcgagaagctccaggagcgcctcgccaagctcgcgggcggcatcgccgtcatcaac
gtcggcgcctccaccgaggtcgagatgaaggaaaagaaggcccgcgtcgaagacgcgctg
cacgcgacccgtgcggccgtggaagagggtatcgtcgccggcggcggcgtcgccctgctc
cgcaccgtcaaggccatcgaggccctcaagctcgagggtgacgaggccttcggcgcccag
atcgtgcgtcgcgcgatcgagcacccgatccgcatgctctgcaccaacgccggcgtcgac
agcggcgtcgtcgtgaaggaagttttggccggcaaggccaacttcggctacaacgtggcc
accggtgagtatgaggacctcgtgaaggccggcgtggttgacccgacgaaggtcacccgc
accgcgctgcagaacgcggcctcgatcgccggtctcctcctgaccaccgagtgcatgatc
accgacatccccgagaagtccgcggccccggccggcggcggcggcggtggcggcggcggc
atgggtggcatgggcggcatggactactga
DBGET
integrated database retrieval system
